RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 MOXD2PA6NHM9 499 aa20.99■□□□□ 0.95
COL9A3-214ENST00000490398 REC8O95072 547 aa20.99■□□□□ 0.95
COL9A3-214ENST00000490398 CALM1P0DP23 149 aa20.99■□□□□ 0.95
COL9A3-214ENST00000490398 CALM2P0DP24 149 aa20.99■□□□□ 0.95
COL9A3-214ENST00000490398 CALM3P0DP25 149 aa20.99■□□□□ 0.95
COL9A3-214ENST00000490398 SMARCA1P28370 1054 aa20.99■□□□□ 0.95
COL9A3-214ENST00000490398 DUSP28Q4G0W2 176 aa20.99■□□□□ 0.95
COL9A3-214ENST00000490398 IL31RAQ8NI17 732 aa20.99■□□□□ 0.95
COL9A3-214ENST00000490398 NSUN6Q8TEA1 469 aaKnown RBP20.99■□□□□ 0.95
COL9A3-214ENST00000490398 USP26Q9BXU7 913 aa20.99■□□□□ 0.95
COL9A3-214ENST00000490398 MAF1Q9H063 256 aa20.99■□□□□ 0.95
COL9A3-214ENST00000490398 SPC25Q9HBM1 224 aa20.99■□□□□ 0.95
COL9A3-214ENST00000490398 STARD7Q9NQZ5 370 aa20.99■□□□□ 0.95
COL9A3-214ENST00000490398 FAM217BQ9NTX9 383 aaPredicted RBP20.99■□□□□ 0.95
COL9A3-214ENST00000490398 MYH6P13533 1939 aa20.99■□□□□ 0.95
COL9A3-214ENST00000490398 KLF18A0A0U1RQI7 1052 aa20.98■□□□□ 0.95
COL9A3-214ENST00000490398 APOBRQ0VD83 1088 aa20.98■□□□□ 0.95
COL9A3-214ENST00000490398 FSCN1Q16658 493 aaKnown RBP20.98■□□□□ 0.95
COL9A3-214ENST00000490398 C1orf53Q5VUE5 145 aa20.98■□□□□ 0.95
COL9A3-214ENST00000490398 ARHGEF16Q5VV41 709 aa20.98■□□□□ 0.95
COL9A3-214ENST00000490398 CXCL17Q6UXB2 119 aa20.98■□□□□ 0.95
COL9A3-214ENST00000490398 Q6ZUG5 572 aa20.98■□□□□ 0.95
COL9A3-214ENST00000490398 RRP36Q96EU6 259 aaKnown RBP20.98■□□□□ 0.95
COL9A3-214ENST00000490398 LZTS2Q9BRK4 669 aa20.98■□□□□ 0.95
COL9A3-214ENST00000490398 AP5M1Q9H0R1 490 aa20.98■□□□□ 0.95
COL9A3-214ENST00000490398 PDLIM7Q9NR12 457 aa20.98■□□□□ 0.95
COL9A3-214ENST00000490398 TRIOBPQ9H2D6 2365 aa20.98■□□□□ 0.95
COL9A3-214ENST00000490398 TRIM43BA6NCK2 446 aa20.97■□□□□ 0.95
COL9A3-214ENST00000490398 RPS6KB1P23443 525 aa20.97■□□□□ 0.95
COL9A3-214ENST00000490398 CDC27P30260 824 aa20.97■□□□□ 0.95
COL9A3-214ENST00000490398 GNAQP50148 359 aa20.97■□□□□ 0.95
COL9A3-214ENST00000490398 MDM2Q00987 491 aaPredicted RBP20.97■□□□□ 0.95
COL9A3-214ENST00000490398 FUT2Q10981 343 aa20.97■□□□□ 0.95
COL9A3-214ENST00000490398 SEPT14Q6ZU15 432 aa20.97■□□□□ 0.95
COL9A3-214ENST00000490398 FCHSD1Q86WN1 690 aa20.97■□□□□ 0.95
COL9A3-214ENST00000490398 TRIM43Q96BQ3 446 aaPredicted RBP20.97■□□□□ 0.95
COL9A3-214ENST00000490398 GRIN2DO15399 1336 aa20.97■□□□□ 0.95
COL9A3-214ENST00000490398 GCOM1H8Y6P7 765 aaPredicted RBP20.96■□□□□ 0.95
COL9A3-214ENST00000490398 ZBTB43O43298 467 aa20.96■□□□□ 0.95
COL9A3-214ENST00000490398 PQBP1O60828 265 aaKnown RBP20.96■□□□□ 0.95
COL9A3-214ENST00000490398 RGS20O76081 388 aa20.96■□□□□ 0.95
COL9A3-214ENST00000490398 NR3C2P08235 984 aa20.96■□□□□ 0.95
COL9A3-214ENST00000490398 POLR2MP0CAP2 368 aa20.96■□□□□ 0.95
COL9A3-214ENST00000490398 ITGB8P26012 769 aa20.96■□□□□ 0.95
COL9A3-214ENST00000490398 CCDC62Q6P9F0 684 aa20.96■□□□□ 0.95
COL9A3-214ENST00000490398 BLOC1S2Q6QNY1 142 aa20.96■□□□□ 0.95
COL9A3-214ENST00000490398 PCSK9Q8NBP7 692 aaKnown RBP20.96■□□□□ 0.95
COL9A3-214ENST00000490398 BRF1Q92994 677 aa20.96■□□□□ 0.95
COL9A3-214ENST00000490398 GLT1D1Q96MS3 346 aa20.96■□□□□ 0.95
COL9A3-214ENST00000490398 IWS1Q96ST2 819 aa20.96■□□□□ 0.95
COL9A3-214ENST00000490398 PDCD2LQ9BRP1 358 aa20.96■□□□□ 0.95
COL9A3-214ENST00000490398 PRDM5Q9NQX1 630 aaPredicted RBP20.96■□□□□ 0.95
COL9A3-214ENST00000490398 CNTNAP5Q8WYK1 1306 aa20.96■□□□□ 0.95
COL9A3-214ENST00000490398 HMGB1P09429 215 aaKnown RBP20.95■□□□□ 0.94
COL9A3-214ENST00000490398 TXNP10599 105 aaKnown RBP20.95■□□□□ 0.94
COL9A3-214ENST00000490398 MYCLP12524 364 aaPredicted RBP20.95■□□□□ 0.94
COL9A3-214ENST00000490398 CDK7P50613 346 aa20.95■□□□□ 0.94
COL9A3-214ENST00000490398 PSMC6P62333 389 aa20.95■□□□□ 0.94
COL9A3-214ENST00000490398 STXBP2Q15833 593 aa20.95■□□□□ 0.94
COL9A3-214ENST00000490398 RTN1Q16799 776 aa20.95■□□□□ 0.94
COL9A3-214ENST00000490398 LY6KQ17RY6 165 aa20.95■□□□□ 0.94
COL9A3-214ENST00000490398 USP17L6PQ6QN14 398 aa20.95■□□□□ 0.94
COL9A3-214ENST00000490398 SYNE3Q6ZMZ3 975 aa20.95■□□□□ 0.94
COL9A3-214ENST00000490398 OR6J1Q8NGC5 347 aa20.95■□□□□ 0.94
COL9A3-214ENST00000490398 SCFD2Q8WU76 684 aa20.95■□□□□ 0.94
COL9A3-214ENST00000490398 GPKOWQ92917 476 aaPredicted RBP eCLIP20.95■□□□□ 0.94
COL9A3-214ENST00000490398 MPHOSPH6Q99547 160 aaKnown RBP20.95■□□□□ 0.94
COL9A3-214ENST00000490398 Q9Y3F1 56 aa20.95■□□□□ 0.94
COL9A3-214ENST00000490398 LAMA2P24043 3122 aaKnown RBP20.95■□□□□ 0.94
COL9A3-214ENST00000490398 GOLGA8AA7E2F4 631 aa20.94■□□□□ 0.94
COL9A3-214ENST00000490398 GOLGA8BA8MQT2 603 aa20.94■□□□□ 0.94
COL9A3-214ENST00000490398 MEIS2O14770 477 aa20.94■□□□□ 0.94
COL9A3-214ENST00000490398 CASTP20810 708 aaKnown RBP20.94■□□□□ 0.94
COL9A3-214ENST00000490398 ADD1P35611 737 aaKnown RBP20.94■□□□□ 0.94
COL9A3-214ENST00000490398 FAAP100Q0VG06 881 aa20.94■□□□□ 0.94
COL9A3-214ENST00000490398 PGM5Q15124 567 aa20.94■□□□□ 0.94
COL9A3-214ENST00000490398 PPP2R5BQ15173 497 aa20.94■□□□□ 0.94
COL9A3-214ENST00000490398 TYW1BQ6NUM6 668 aa20.94■□□□□ 0.94
COL9A3-214ENST00000490398 PPP1R13LQ8WUF5 828 aa20.94■□□□□ 0.94
COL9A3-214ENST00000490398 VTI1AQ96AJ9 217 aa20.94■□□□□ 0.94
COL9A3-214ENST00000490398 MAP3K20Q9NYL2 800 aaKnown RBP20.94■□□□□ 0.94
COL9A3-214ENST00000490398 SEC63Q9UGP8 760 aaKnown RBP20.94■□□□□ 0.94
COL9A3-214ENST00000490398 NAP1L2Q9ULW6 460 aaPredicted RBP20.94■□□□□ 0.94
COL9A3-214ENST00000490398 ELP1O95163 1332 aa20.94■□□□□ 0.94
COL9A3-214ENST00000490398 B4DLN1 442 aa20.93■□□□□ 0.94
COL9A3-214ENST00000490398 FXR1P51114 621 aaKnown RBP eCLIP20.93■□□□□ 0.94
COL9A3-214ENST00000490398 MRPL12P52815 198 aaKnown RBP20.93■□□□□ 0.94
COL9A3-214ENST00000490398 TRAF1Q13077 416 aa20.93■□□□□ 0.94
COL9A3-214ENST00000490398 ANKRD33Q7Z3H0 272 aa20.93■□□□□ 0.94
COL9A3-214ENST00000490398 VSIG10LQ86VR7 867 aa20.93■□□□□ 0.94
COL9A3-214ENST00000490398 ARVCFO00192 962 aa20.92■□□□□ 0.94
COL9A3-214ENST00000490398 EIF3JO75822 258 aaKnown RBP20.92■□□□□ 0.94
COL9A3-214ENST00000490398 ARHGAP1Q07960 439 aa20.92■□□□□ 0.94
COL9A3-214ENST00000490398 TTLL4Q14679 1199 aa20.92■□□□□ 0.94
COL9A3-214ENST00000490398 WWC2Q6AWC2 1192 aa20.92■□□□□ 0.94
COL9A3-214ENST00000490398 AGXT2Q9BYV1 514 aa20.92■□□□□ 0.94
COL9A3-214ENST00000490398 ZSWIM6Q9HCJ5 1215 aa20.92■□□□□ 0.94
COL9A3-214ENST00000490398 RBM28Q9NW13 759 aaKnown RBP20.92■□□□□ 0.94
COL9A3-214ENST00000490398 DDX41Q9UJV9 622 aaKnown RBP20.92■□□□□ 0.94
COL9A3-214ENST00000490398 A0A0U1RQG5 324 aaPredicted RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms