RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 CREB3L3Q68CJ9 461 aa9.23□□□□□ -0.93
SMC6-209ENST00000489535 C15orf52Q6ZUT6 534 aaKnown RBP9.23□□□□□ -0.93
SMC6-209ENST00000489535 ZNF804AQ7Z570 1209 aa9.23□□□□□ -0.93
SMC6-209ENST00000489535 MAGEB6Q8N7X4 407 aa9.23□□□□□ -0.93
SMC6-209ENST00000489535 GIMAP7Q8NHV1 300 aa9.23□□□□□ -0.93
SMC6-209ENST00000489535 TBC1D16Q8TBP0 767 aa9.23□□□□□ -0.93
SMC6-209ENST00000489535 SPACA7Q96KW9 195 aa9.23□□□□□ -0.93
SMC6-209ENST00000489535 PUS7LQ9H0K6 701 aaKnown RBP9.23□□□□□ -0.93
SMC6-209ENST00000489535 TMX4Q9H1E5 349 aaPredicted RBP9.23□□□□□ -0.93
SMC6-209ENST00000489535 LRP2BPQ9P2M1 347 aa9.23□□□□□ -0.93
SMC6-209ENST00000489535 ABCF2Q9UG63 623 aa9.23□□□□□ -0.93
SMC6-209ENST00000489535 PDS5AQ29RF7 1337 aaKnown RBP9.23□□□□□ -0.93
SMC6-209ENST00000489535 TCRBV5S4A2TA0A5A2 114 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 USP17L15C9J2P7 530 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 USP17L10C9JJH3 530 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 USP17L13C9JLJ4 530 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 USP17L12C9JPN9 530 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 USP17L11C9JVI0 530 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 USP17L21D6R901 530 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 USP17L18D6R9N7 530 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 USP17L22D6RA61 530 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 USP17L17D6RBQ6 530 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 USP17L19D6RCP7 530 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 USP17L20D6RJB6 530 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 SLC27A2O14975 620 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 KIF4AO95239 1232 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 USP17L24Q0WX57 530 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 NECTIN1Q15223 517 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 SGO2Q562F6 1265 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 COX20Q5RI15 118 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 VPS53Q5VIR6 699 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 SPOCD1Q6ZMY3 1216 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 ERICH6Q7L0X2 663 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 ETFBKMTQ8IXQ9 262 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 SHISA5Q8N114 240 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 FBXL6Q8N531 539 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 IL17RAQ96F46 866 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 DSCC1Q9BVC3 393 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 OSBPL1AQ9BXW6 950 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 RAI14Q9P0K7 980 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 POLLQ9UGP5 575 aa9.22□□□□□ -0.93
SMC6-209ENST00000489535 FAM196BA6NMK8 535 aa9.21□□□□□ -0.94
SMC6-209ENST00000489535 GPAA1O43292 621 aa9.21□□□□□ -0.94
SMC6-209ENST00000489535 ZBTB7AO95365 584 aa9.21□□□□□ -0.94
SMC6-209ENST00000489535 HSPD1P10809 573 aaKnown RBP9.21□□□□□ -0.94
SMC6-209ENST00000489535 ZKSCAN1P17029 563 aaPredicted RBP9.21□□□□□ -0.94
SMC6-209ENST00000489535 R3HDM1Q15032 1099 aaKnown RBP9.21□□□□□ -0.94
SMC6-209ENST00000489535 FDX2Q6P4F2 183 aa9.21□□□□□ -0.94
SMC6-209ENST00000489535 OLFM4Q6UX06 510 aa9.21□□□□□ -0.94
SMC6-209ENST00000489535 DPP8Q6V1X1 898 aaPredicted RBP9.21□□□□□ -0.94
SMC6-209ENST00000489535 TDRD7Q8NHU6 1098 aaKnown RBP9.21□□□□□ -0.94
SMC6-209ENST00000489535 KCNB2Q92953 911 aa9.21□□□□□ -0.94
SMC6-209ENST00000489535 RUSC1Q9BVN2 902 aa9.21□□□□□ -0.94
SMC6-209ENST00000489535 PBX4Q9BYU1 374 aa9.21□□□□□ -0.94
SMC6-209ENST00000489535 ADAM19Q9H013 955 aa9.21□□□□□ -0.94
SMC6-209ENST00000489535 CD209Q9NNX6 404 aa9.21□□□□□ -0.94
SMC6-209ENST00000489535 JAG2Q9Y219 1238 aa9.21□□□□□ -0.94
SMC6-209ENST00000489535 MYH4Q9Y623 1939 aa9.21□□□□□ -0.94
SMC6-209ENST00000489535 CYP7A1P22680 504 aa9.2□□□□□ -0.94
SMC6-209ENST00000489535 POLD1P28340 1107 aa9.2□□□□□ -0.94
SMC6-209ENST00000489535 NEK4P51957 841 aa9.2□□□□□ -0.94
SMC6-209ENST00000489535 WNT8BQ93098 351 aa9.2□□□□□ -0.94
SMC6-209ENST00000489535 JAKMIP1Q96N16 626 aaKnown RBP9.2□□□□□ -0.94
SMC6-209ENST00000489535 MTFR1LQ9H019 292 aa9.2□□□□□ -0.94
SMC6-209ENST00000489535 ZMYND15Q9H091 742 aa9.2□□□□□ -0.94
SMC6-209ENST00000489535 RPAP1Q9BWH6 1393 aaPredicted RBP9.2□□□□□ -0.94
SMC6-209ENST00000489535 H3BRJ5 948 aa9.19□□□□□ -0.94
SMC6-209ENST00000489535 GAS2O43903 313 aaKnown RBP9.19□□□□□ -0.94
SMC6-209ENST00000489535 MBD4O95243 580 aa9.19□□□□□ -0.94
SMC6-209ENST00000489535 CYP21A2P08686 494 aa9.19□□□□□ -0.94
SMC6-209ENST00000489535 IL1R1P14778 569 aa9.19□□□□□ -0.94
SMC6-209ENST00000489535 PTPRAP18433 802 aa9.19□□□□□ -0.94
SMC6-209ENST00000489535 CASTP20810 708 aaKnown RBP9.19□□□□□ -0.94
SMC6-209ENST00000489535 ADCK5Q3MIX3 580 aa9.19□□□□□ -0.94
SMC6-209ENST00000489535 ZNF648Q5T619 568 aaPredicted RBP9.19□□□□□ -0.94
SMC6-209ENST00000489535 SPTY2D1Q68D10 685 aaPredicted RBP9.19□□□□□ -0.94
SMC6-209ENST00000489535 NAA16Q6N069 864 aaPredicted RBP9.19□□□□□ -0.94
SMC6-209ENST00000489535 ZGPATQ8N5A5 531 aaKnown RBP9.19□□□□□ -0.94
SMC6-209ENST00000489535 WDR66Q8TBY9 1149 aa9.19□□□□□ -0.94
SMC6-209ENST00000489535 EYA3Q99504 573 aa9.19□□□□□ -0.94
SMC6-209ENST00000489535 UPF3BQ9BZI7 483 aaKnown RBP9.19□□□□□ -0.94
SMC6-209ENST00000489535 ZC3H12CQ9C0D7 883 aaKnown RBP9.19□□□□□ -0.94
SMC6-209ENST00000489535 ARMT1Q9H993 441 aa9.19□□□□□ -0.94
SMC6-209ENST00000489535 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMC6-209ENST00000489535 SALL1Q9NSC2 1324 aa9.19□□□□□ -0.94
SMC6-209ENST00000489535 SNED1Q8TER0 1413 aa9.19□□□□□ -0.94
SMC6-209ENST00000489535 FOXP2O15409 715 aa9.18□□□□□ -0.94
SMC6-209ENST00000489535 PAPLNO95428 1278 aa9.18□□□□□ -0.94
SMC6-209ENST00000489535 CPA1P15085 419 aa9.18□□□□□ -0.94
SMC6-209ENST00000489535 DPEP1P16444 411 aa9.18□□□□□ -0.94
SMC6-209ENST00000489535 PSMA5P28066 241 aa9.18□□□□□ -0.94
SMC6-209ENST00000489535 PRDX5P30044 214 aa9.18□□□□□ -0.94
SMC6-209ENST00000489535 NLRP12P59046 1061 aa9.18□□□□□ -0.94
SMC6-209ENST00000489535 MECOMQ03112 1051 aa9.18□□□□□ -0.94
SMC6-209ENST00000489535 KRT32Q14532 448 aa9.18□□□□□ -0.94
SMC6-209ENST00000489535 NOL8Q76FK4 1167 aaKnown RBP9.18□□□□□ -0.94
SMC6-209ENST00000489535 ADGRA1Q86SQ6 560 aa9.18□□□□□ -0.94
SMC6-209ENST00000489535 DZIP1Q86YF9 867 aaKnown RBP9.18□□□□□ -0.94
SMC6-209ENST00000489535 LCORLQ8N3X6 602 aa9.18□□□□□ -0.94
SMC6-209ENST00000489535 MIGA1Q8NAN2 632 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms