RNA–Protein interactions for RNA: ENST00000489206.1

SYNGR1-207, Transcript of synaptogyrin 1, humanhuman

TSL 2

Gene SYNGR1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-207ENST00000489206 PNMA5Q96PV4 448 aa21.87■■□□□ 1.09
SYNGR1-207ENST00000489206 NAP1L4Q99733 375 aaKnown RBP21.87■■□□□ 1.09
SYNGR1-207ENST00000489206 JMJD4Q9H9V9 463 aa21.87■■□□□ 1.09
SYNGR1-207ENST00000489206 DDX4Q9NQI0 724 aaKnown RBP21.87■■□□□ 1.09
SYNGR1-207ENST00000489206 FCER1AP12319 257 aa21.87■■□□□ 1.09
SYNGR1-207ENST00000489206 CYLC1P35663 651 aaPredicted RBP21.87■■□□□ 1.09
SYNGR1-207ENST00000489206 CLK2P49760 499 aaKnown RBP21.87■■□□□ 1.09
SYNGR1-207ENST00000489206 TERF2Q15554 542 aa21.87■■□□□ 1.09
SYNGR1-207ENST00000489206 CCDC170Q8IYT3 715 aa21.87■■□□□ 1.09
SYNGR1-207ENST00000489206 EHBP1Q8NDI1 1231 aa21.87■■□□□ 1.09
SYNGR1-207ENST00000489206 GLT8D2Q9H1C3 349 aa21.87■■□□□ 1.09
SYNGR1-207ENST00000489206 USP40Q9NVE5 1235 aa21.87■■□□□ 1.09
SYNGR1-207ENST00000489206 REXO2Q9Y3B8 237 aaKnown RBP21.87■■□□□ 1.09
SYNGR1-207ENST00000489206 RIMBP2O15034 1052 aa21.86■■□□□ 1.09
SYNGR1-207ENST00000489206 SLC37A4O43826 429 aa21.86■■□□□ 1.09
SYNGR1-207ENST00000489206 GCFC2P16383 781 aaKnown RBP21.86■■□□□ 1.09
SYNGR1-207ENST00000489206 TRIM21P19474 475 aaKnown RBP21.86■■□□□ 1.09
SYNGR1-207ENST00000489206 CDK17Q00537 523 aa21.86■■□□□ 1.09
SYNGR1-207ENST00000489206 TMEM119Q4V9L6 283 aa21.86■■□□□ 1.09
SYNGR1-207ENST00000489206 FKBP15Q5T1M5 1219 aa21.86■■□□□ 1.09
SYNGR1-207ENST00000489206 KRT79Q5XKE5 535 aa21.86■■□□□ 1.09
SYNGR1-207ENST00000489206 WDR59Q6PJI9 974 aa21.86■■□□□ 1.09
SYNGR1-207ENST00000489206 ADGRF4Q8IZF3 695 aa21.86■■□□□ 1.09
SYNGR1-207ENST00000489206 GUF1Q8N442 669 aaKnown RBP21.86■■□□□ 1.09
SYNGR1-207ENST00000489206 CERS5Q8N5B7 392 aa21.86■■□□□ 1.09
SYNGR1-207ENST00000489206 RAD54LQ92698 747 aa21.86■■□□□ 1.09
SYNGR1-207ENST00000489206 CUL5Q93034 780 aa21.86■■□□□ 1.09
SYNGR1-207ENST00000489206 NOC4LQ9BVI4 516 aaKnown RBP21.86■■□□□ 1.09
SYNGR1-207ENST00000489206 EHD4Q9H223 541 aa21.86■■□□□ 1.09
SYNGR1-207ENST00000489206 GPCPD1Q9NPB8 672 aa21.86■■□□□ 1.09
SYNGR1-207ENST00000489206 TDP2O95551 362 aa21.85■■□□□ 1.09
SYNGR1-207ENST00000489206 SHMT1P34896 483 aa21.85■■□□□ 1.09
SYNGR1-207ENST00000489206 PLA2G4AP47712 749 aa21.85■■□□□ 1.09
SYNGR1-207ENST00000489206 MRPL12P52815 198 aaKnown RBP21.85■■□□□ 1.09
SYNGR1-207ENST00000489206 PSMD2Q13200 908 aa21.85■■□□□ 1.09
SYNGR1-207ENST00000489206 MSANTD4Q8NCY6 345 aa21.85■■□□□ 1.09
SYNGR1-207ENST00000489206 MTMR8Q96EF0 704 aa21.85■■□□□ 1.09
SYNGR1-207ENST00000489206 CCDC17Q96LX7 622 aa21.85■■□□□ 1.09
SYNGR1-207ENST00000489206 MYMKA6NI61 221 aa21.85■■□□□ 1.09
SYNGR1-207ENST00000489206 PSMD14O00487 310 aa21.85■■□□□ 1.09
SYNGR1-207ENST00000489206 SLC26A4O43511 780 aa21.85■■□□□ 1.09
SYNGR1-207ENST00000489206 EDIL3O43854 480 aa21.85■■□□□ 1.09
SYNGR1-207ENST00000489206 TUBBP07437 444 aa21.85■■□□□ 1.09
SYNGR1-207ENST00000489206 NPR1P16066 1061 aa21.85■■□□□ 1.09
SYNGR1-207ENST00000489206 SEPT2Q15019 361 aa21.85■■□□□ 1.09
SYNGR1-207ENST00000489206 MIIPQ5JXC2 388 aa21.85■■□□□ 1.09
SYNGR1-207ENST00000489206 TBC1D8O95759 1140 aa21.84■■□□□ 1.09
SYNGR1-207ENST00000489206 AMPD2Q01433 879 aa21.84■■□□□ 1.09
SYNGR1-207ENST00000489206 LRRC63Q05C16 580 aa21.84■■□□□ 1.09
SYNGR1-207ENST00000489206 MCM6Q14566 821 aa21.84■■□□□ 1.09
SYNGR1-207ENST00000489206 SNX29Q8TEQ0 813 aa21.84■■□□□ 1.09
SYNGR1-207ENST00000489206 HNRNPLLQ8WVV9 542 aaKnown RBP21.84■■□□□ 1.09
SYNGR1-207ENST00000489206 TEKT1Q969V4 418 aa21.84■■□□□ 1.09
SYNGR1-207ENST00000489206 COL11A2P13942 1736 aaPredicted RBP21.83■■□□□ 1.09
SYNGR1-207ENST00000489206 SIPA1L1O43166 1804 aa21.83■■□□□ 1.09
SYNGR1-207ENST00000489206 ZBTB5O15062 677 aa21.83■■□□□ 1.09
SYNGR1-207ENST00000489206 TNNI2P48788 182 aa21.83■■□□□ 1.09
SYNGR1-207ENST00000489206 EPC1Q9H2F5 836 aa21.83■■□□□ 1.09
SYNGR1-207ENST00000489206 SEMA6BQ9H3T3 888 aa21.83■■□□□ 1.09
SYNGR1-207ENST00000489206 RAB21Q9UL25 225 aa21.83■■□□□ 1.09
SYNGR1-207ENST00000489206 CTAGE15A4D2H0 777 aa21.83■■□□□ 1.08
SYNGR1-207ENST00000489206 EIF3CLB5ME19 914 aaKnown RBP21.83■■□□□ 1.08
SYNGR1-207ENST00000489206 F8W031 263 aaPredicted RBP21.83■■□□□ 1.08
SYNGR1-207ENST00000489206 SEC31AO94979 1220 aaKnown RBP21.83■■□□□ 1.08
SYNGR1-207ENST00000489206 IPO7O95373 1038 aaKnown RBP21.83■■□□□ 1.08
SYNGR1-207ENST00000489206 CTAGE8P0CG41 777 aa21.83■■□□□ 1.08
SYNGR1-207ENST00000489206 ALDH1B1P30837 517 aa21.83■■□□□ 1.08
SYNGR1-207ENST00000489206 EIF6P56537 245 aaKnown RBP21.83■■□□□ 1.08
SYNGR1-207ENST00000489206 CDC42EP5Q6NZY7 148 aa21.83■■□□□ 1.08
SYNGR1-207ENST00000489206 CTAGE6Q86UF2 777 aa21.83■■□□□ 1.08
SYNGR1-207ENST00000489206 CTAGE4Q8IX94 777 aa21.83■■□□□ 1.08
SYNGR1-207ENST00000489206 EIF3CQ99613 913 aaKnown RBP21.83■■□□□ 1.08
SYNGR1-207ENST00000489206 SLC39A2Q9NP94 309 aa21.83■■□□□ 1.08
SYNGR1-207ENST00000489206 PUF60Q9UHX1 559 aaKnown RBP21.83■■□□□ 1.08
SYNGR1-207ENST00000489206 MYO6Q9UM54 1294 aa21.83■■□□□ 1.08
SYNGR1-207ENST00000489206 RASSF10A6NK89 507 aa21.82■■□□□ 1.08
SYNGR1-207ENST00000489206 KRT86O43790 486 aa21.82■■□□□ 1.08
SYNGR1-207ENST00000489206 ABL1P00519 1130 aa21.82■■□□□ 1.08
SYNGR1-207ENST00000489206 HERVK_113P62684 666 aa21.82■■□□□ 1.08
SYNGR1-207ENST00000489206 UBXN6Q9BZV1 441 aa21.82■■□□□ 1.08
SYNGR1-207ENST00000489206 DDX25Q9UHL0 483 aaKnown RBP21.82■■□□□ 1.08
SYNGR1-207ENST00000489206 KDM3AQ9Y4C1 1321 aa21.82■■□□□ 1.08
SYNGR1-207ENST00000489206 EHHADHQ08426 723 aa21.81■■□□□ 1.08
SYNGR1-207ENST00000489206 MAN2A1Q16706 1144 aa21.81■■□□□ 1.08
SYNGR1-207ENST00000489206 CCDC96Q2M329 555 aa21.81■■□□□ 1.08
SYNGR1-207ENST00000489206 ANKZF1Q9H8Y5 726 aa21.81■■□□□ 1.08
SYNGR1-207ENST00000489206 GUCA1BQ9UMX6 200 aa21.81■■□□□ 1.08
SYNGR1-207ENST00000489206 POTEMA6NI47 508 aa21.81■■□□□ 1.08
SYNGR1-207ENST00000489206 PPP1R11O60927 126 aaPredicted RBP21.81■■□□□ 1.08
SYNGR1-207ENST00000489206 ERLIN1O75477 346 aa21.81■■□□□ 1.08
SYNGR1-207ENST00000489206 HNRNPH3P31942 346 aaKnown RBP21.81■■□□□ 1.08
SYNGR1-207ENST00000489206 VWA3BQ502W6 1294 aa21.81■■□□□ 1.08
SYNGR1-207ENST00000489206 HYIQ5T013 277 aa21.81■■□□□ 1.08
SYNGR1-207ENST00000489206 ZNF771Q7L3S4 317 aaPredicted RBP21.81■■□□□ 1.08
SYNGR1-207ENST00000489206 KIAA1328Q86T90 577 aa21.81■■□□□ 1.08
SYNGR1-207ENST00000489206 PCMTD1Q96MG8 357 aaPredicted RBP21.81■■□□□ 1.08
SYNGR1-207ENST00000489206 AGPAT5Q9NUQ2 364 aa21.81■■□□□ 1.08
SYNGR1-207ENST00000489206 CCDC122Q5T0U0 273 aa21.8■■□□□ 1.08
SYNGR1-207ENST00000489206 TRAPPC11Q7Z392 1133 aa21.8■■□□□ 1.08
SYNGR1-207ENST00000489206 CLEC10AQ8IUN9 316 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms