RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 MKL1Q969V6 931 aa20.42■□□□□ 0.86
POLR2J3-205ENST00000489144 SMC2O95347 1197 aa20.42■□□□□ 0.86
POLR2J3-205ENST00000489144 HIRAP54198 1017 aaPredicted RBP20.42■□□□□ 0.86
POLR2J3-205ENST00000489144 LETM2Q2VYF4 491 aa20.42■□□□□ 0.86
POLR2J3-205ENST00000489144 RESP18Q5W5W9 173 aa20.42■□□□□ 0.86
POLR2J3-205ENST00000489144 SH3GLB2Q9NR46 395 aa20.42■□□□□ 0.86
POLR2J3-205ENST00000489144 PTPREP23469 700 aa20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 INPP5BP32019 993 aa20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 IL17AQ16552 155 aa20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 LONRF3Q496Y0 759 aa20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 CACTINQ8WUQ7 758 aaKnown RBP20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 ZMYND12Q9H0C1 365 aa20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 GGA3Q9NZ52 723 aa20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 H7C1D1 291 aa20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 CUTAO60888 179 aa20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 CCDC192P0DO97 292 aa20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 CAP2P40123 477 aa20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 CDC37Q16543 378 aaPredicted RBP20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 GPATCH4Q5T3I0 446 aaKnown RBP20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 LUZP1Q86V48 1076 aa20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 TMEM60Q9H2L4 133 aa20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 SMCHD1A6NHR9 2005 aa20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 POLR2DO15514 142 aaKnown RBP20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 TNNI2P48788 182 aa20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 DPF2Q92785 391 aa20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 FBXO28Q9NVF7 368 aa20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 KCNH3Q9ULD8 1083 aa20.41■□□□□ 0.86
POLR2J3-205ENST00000489144 A0A087X0B3 334 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 PNMA6FA0A0J9YX94 578 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 USP17L15C9J2P7 530 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 USP17L13C9JLJ4 530 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 USP17L11C9JVI0 530 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 USP17L18D6R9N7 530 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 USP17L22D6RA61 530 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 USP17L17D6RBQ6 530 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 USP17L19D6RCP7 530 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 USP17L20D6RJB6 530 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 USP17L24Q0WX57 530 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 PNOCQ13519 176 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 USP17L6PQ6QN14 398 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 C11orf57Q6ZUT1 292 aaPredicted RBP20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 C6orf50Q9HD87 102 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 GPRC5DQ9NZD1 345 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 USP27XA6NNY8 438 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 ZBTB5O15062 677 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 BMP3P12645 472 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 SCP2P22307 547 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 FKBP1CQ5VVH2 108 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 ZKSCAN4Q969J2 545 aaPredicted RBP20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 ZNF341Q9BYN7 854 aa20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 SRPRBQ9Y5M8 271 aaKnown RBP20.4■□□□□ 0.86
POLR2J3-205ENST00000489144 COL2A1P02458 1487 aaPredicted RBP20.39■□□□□ 0.86
POLR2J3-205ENST00000489144 PP2D1A8MPX8 630 aa20.39■□□□□ 0.85
POLR2J3-205ENST00000489144 PHF20L1A8MW92 1017 aa20.39■□□□□ 0.85
POLR2J3-205ENST00000489144 MNAT1P51948 309 aa20.39■□□□□ 0.85
POLR2J3-205ENST00000489144 REXO1Q8N1G1 1221 aaKnown RBP20.39■□□□□ 0.85
POLR2J3-205ENST00000489144 FAM200AQ8TCP9 573 aa20.39■□□□□ 0.85
POLR2J3-205ENST00000489144 TBCKQ8TEA7 893 aa20.39■□□□□ 0.85
POLR2J3-205ENST00000489144 GJA10Q969M2 543 aa20.39■□□□□ 0.85
POLR2J3-205ENST00000489144 HPSEQ9Y251 543 aa20.39■□□□□ 0.85
POLR2J3-205ENST00000489144 CCNT1O60563 726 aaKnown RBP20.39■□□□□ 0.85
POLR2J3-205ENST00000489144 CASP1P29466 404 aa20.39■□□□□ 0.85
POLR2J3-205ENST00000489144 ADCY7P51828 1080 aa20.39■□□□□ 0.85
POLR2J3-205ENST00000489144 INHBEP58166 350 aa20.39■□□□□ 0.85
POLR2J3-205ENST00000489144 DCAF4Q8WV16 495 aa20.39■□□□□ 0.85
POLR2J3-205ENST00000489144 SYMPKQ92797 1274 aaKnown RBP20.39■□□□□ 0.85
POLR2J3-205ENST00000489144 KIFC2Q96AC6 838 aa20.39■□□□□ 0.85
POLR2J3-205ENST00000489144 ARHGEF10LQ9HCE6 1279 aa20.39■□□□□ 0.85
POLR2J3-205ENST00000489144 CEP131Q9UPN4 1083 aa20.39■□□□□ 0.85
POLR2J3-205ENST00000489144 CCDC174Q6PII3 467 aa20.38■□□□□ 0.85
POLR2J3-205ENST00000489144 TADA2BQ86TJ2 420 aa20.38■□□□□ 0.85
POLR2J3-205ENST00000489144 STAMQ92783 540 aa20.38■□□□□ 0.85
POLR2J3-205ENST00000489144 PCDHA1Q9Y5I3 950 aa20.38■□□□□ 0.85
POLR2J3-205ENST00000489144 RBM43Q6ZSC3 357 aaKnown RBP20.38■□□□□ 0.85
POLR2J3-205ENST00000489144 PLIN2Q99541 437 aa20.38■□□□□ 0.85
POLR2J3-205ENST00000489144 SERTAD1Q9UHV2 236 aa20.38■□□□□ 0.85
POLR2J3-205ENST00000489144 A0A087WUV0 522 aaPredicted RBP20.37■□□□□ 0.85
POLR2J3-205ENST00000489144 NEMFO60524 1076 aa20.37■□□□□ 0.85
POLR2J3-205ENST00000489144 TBC1D8O95759 1140 aa20.37■□□□□ 0.85
POLR2J3-205ENST00000489144 USP8P40818 1118 aa20.37■□□□□ 0.85
POLR2J3-205ENST00000489144 C9orf131Q5VYM1 1079 aa20.37■□□□□ 0.85
POLR2J3-205ENST00000489144 PLA2G4DQ86XP0 818 aa20.37■□□□□ 0.85
POLR2J3-205ENST00000489144 GMCL1P1Q8NEA9 526 aa20.37■□□□□ 0.85
POLR2J3-205ENST00000489144 MIEF2Q96C03 454 aa20.37■□□□□ 0.85
POLR2J3-205ENST00000489144 DHX58Q96C10 678 aa20.37■□□□□ 0.85
POLR2J3-205ENST00000489144 FAXDC2Q96IV6 333 aa20.37■□□□□ 0.85
POLR2J3-205ENST00000489144 ANKRD33BA6NCL7 494 aa20.37■□□□□ 0.85
POLR2J3-205ENST00000489144 TNFAIP1Q13829 316 aa20.37■□□□□ 0.85
POLR2J3-205ENST00000489144 SYDE2Q5VT97 1194 aa20.37■□□□□ 0.85
POLR2J3-205ENST00000489144 CCDC12Q8WUD4 166 aaPredicted RBP20.37■□□□□ 0.85
POLR2J3-205ENST00000489144 SASH3O75995 380 aa20.36■□□□□ 0.85
POLR2J3-205ENST00000489144 GNA11P29992 359 aa20.36■□□□□ 0.85
POLR2J3-205ENST00000489144 ZNF75DP51815 510 aa20.36■□□□□ 0.85
POLR2J3-205ENST00000489144 ATP2C1P98194 919 aaPredicted RBP20.36■□□□□ 0.85
POLR2J3-205ENST00000489144 GPC2Q8N158 579 aa20.36■□□□□ 0.85
POLR2J3-205ENST00000489144 DAGLBQ8NCG7 672 aa20.36■□□□□ 0.85
POLR2J3-205ENST00000489144 TMX2Q9Y320 296 aa20.36■□□□□ 0.85
POLR2J3-205ENST00000489144 SBF1O95248 1867 aa20.36■□□□□ 0.85
POLR2J3-205ENST00000489144 SMARCA1P28370 1054 aa20.36■□□□□ 0.85
POLR2J3-205ENST00000489144 IRX1P78414 480 aaPredicted RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms