RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 MRPL12P52815 198 aaKnown RBP13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 WTAPQ15007 396 aa13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 MFSD5Q6N075 450 aa13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 SCFD2Q8WU76 684 aa13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 GUCD1Q96NT3 240 aa13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 AMNQ9BXJ7 453 aa13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 MRPL11Q9Y3B7 192 aaKnown RBP13.16□□□□□ -0.3
NIPAL3-207ENST00000488155 LOC102724159A0A0B4J2E5 919 aa13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 PALM3A6NDB9 673 aaPredicted RBP13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 B4GALT4O60513 344 aa13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 PPP1R11O60927 126 aaPredicted RBP13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 CENPBP07199 599 aaPredicted RBP13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 CCL23P55773 120 aa13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 PPIGQ13427 754 aaKnown RBP eCLIP13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 TTLL4Q14679 1199 aa13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 GRM4Q14833 912 aa13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 PWP2Q15269 919 aaKnown RBP13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 SLC35G1Q2M3R5 365 aa13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 FAM47CQ5HY64 1035 aa13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 TMEM67Q5HYA8 995 aa13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 C16orf59Q7L2K0 433 aa13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 MCF2L2Q86YR7 1114 aa13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 SLC43A3Q8NBI5 491 aa13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 RGS22Q8NE09 1264 aa13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 MAP4K1Q92918 833 aa13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 ZFP91Q96JP5 570 aaPredicted RBP13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 PIGSQ96S52 555 aa13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 RMDN3Q96TC7 470 aa13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 GPHNQ9NQX3 736 aaPredicted RBP13.15□□□□□ -0.3
NIPAL3-207ENST00000488155 GRXCR1A8MXD5 290 aa13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 OPLAHO14841 1288 aa13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 MYCLP12524 364 aaPredicted RBP13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 HOXA13P31271 388 aaPredicted RBP13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 CPT1AP50416 773 aa13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 ANTXR2P58335 489 aa13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 PURAQ00577 322 aaKnown RBP13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 LY6KQ17RY6 165 aa13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 BRDTQ58F21 947 aaPredicted RBP13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 TMEM240Q5SV17 173 aa13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 ARHGEF16Q5VV41 709 aa13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 FAM109BQ6ICB4 259 aaPredicted RBP13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 ZNF365Q70YC5 407 aa13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 TMEM199Q8N511 208 aa13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 NSUN6Q8TEA1 469 aaKnown RBP13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 MTG1Q9BT17 334 aaPredicted RBP13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 HIPK3Q9H422 1215 aa13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 TRMT13Q9NUP7 481 aaKnown RBP13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 POLR3EQ9NVU0 708 aa13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 STXBP5LQ9Y2K9 1186 aa13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 PCDHA1Q9Y5I3 950 aa13.14□□□□□ -0.31
NIPAL3-207ENST00000488155 ZBTB5O15062 677 aa13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 NKRFO15226 690 aaKnown RBP eCLIP13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 SORBS3O60504 671 aa13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 CYP2C9P11712 490 aa13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 SMAD3P84022 425 aaKnown RBP13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 COL9A3Q14050 684 aaPredicted RBP13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 SART3Q15020 963 aaKnown RBP13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 STXBP2Q15833 593 aa13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 NBPF20Q3BBV1 942 aa13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 CATIPQ7Z7H3 387 aa13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 FCHSD1Q86WN1 690 aa13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 MB21D2Q8IYB1 491 aaPredicted RBP13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 SCLYQ96I15 445 aa13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 MYL10Q9BUA6 226 aa13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 NOC4LQ9BVI4 516 aaKnown RBP13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 ALDH8A1Q9H2A2 487 aaPredicted RBP13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 TTYH1Q9H313 450 aaPredicted RBP13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 SEMA6BQ9H3T3 888 aa13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 PXMP2Q9NR77 195 aa13.13□□□□□ -0.31
NIPAL3-207ENST00000488155 TANC1Q9C0D5 1861 aa13.12□□□□□ -0.31
NIPAL3-207ENST00000488155 CYTH3O43739 400 aa13.12□□□□□ -0.31
NIPAL3-207ENST00000488155 NR3C2P08235 984 aa13.12□□□□□ -0.31
NIPAL3-207ENST00000488155 TROAPQ12815 778 aa13.12□□□□□ -0.31
NIPAL3-207ENST00000488155 CCDC62Q6P9F0 684 aa13.12□□□□□ -0.31
NIPAL3-207ENST00000488155 RAB11FIP4Q86YS3 637 aa13.12□□□□□ -0.31
NIPAL3-207ENST00000488155 IGDCC4Q8TDY8 1250 aa13.12□□□□□ -0.31
NIPAL3-207ENST00000488155 AFG1LQ8WV93 481 aa13.12□□□□□ -0.31
NIPAL3-207ENST00000488155 MTMR8Q96EF0 704 aa13.12□□□□□ -0.31
NIPAL3-207ENST00000488155 CDX2Q99626 313 aaPredicted RBP13.12□□□□□ -0.31
NIPAL3-207ENST00000488155 ESYT1Q9BSJ8 1104 aa13.12□□□□□ -0.31
NIPAL3-207ENST00000488155 LRRC2Q9BYS8 371 aa13.12□□□□□ -0.31
NIPAL3-207ENST00000488155 LSG1Q9H089 658 aaKnown RBP13.12□□□□□ -0.31
NIPAL3-207ENST00000488155 IL23AQ9NPF7 189 aa13.12□□□□□ -0.31
NIPAL3-207ENST00000488155 CDH23Q9H251 3354 aa13.12□□□□□ -0.31
NIPAL3-207ENST00000488155 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 A6NJR5 290 aa13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 PRC1O43663 620 aa13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 GH1P01241 217 aa13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 RXRAP19793 462 aa13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 HSD17B4P51659 736 aa13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 CASC1Q6TDU7 716 aa13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 NFXL1Q6ZNB6 911 aa13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 OTOP2Q7RTS6 562 aa13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 IL31RAQ8NI17 732 aa13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 MYLIPQ8WY64 445 aa13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 IWS1Q96ST2 819 aa13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 WNT8AQ9H1J5 351 aa13.11□□□□□ -0.31
NIPAL3-207ENST00000488155 RIOX1Q9H6W3 641 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms