RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 FBXL18Q96ME1 805 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 CCDC140Q96MF4 163 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 ZDHHC15Q96MV8 337 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 MIPEPQ99797 713 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 RTFDC1Q9BY42 306 aaPredicted RBP4.38□□□□□ -1.71
GPNMB-212ENST00000487890 LGR6Q9HBX8 967 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 CYP26B1Q9NR63 512 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 GFOD1Q9NXC2 390 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 TRHDEQ9UKU6 1024 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 DIS3Q9Y2L1 958 aaKnown RBP4.38□□□□□ -1.71
GPNMB-212ENST00000487890 GPR55Q9Y2T6 319 aaPredicted RBP4.38□□□□□ -1.71
GPNMB-212ENST00000487890 PCDHB12Q9Y5F1 795 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 CNTNAP4Q9C0A0 1308 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 E9PCH4 1651 aa4.38□□□□□ -1.71
GPNMB-212ENST00000487890 MED14O60244 1454 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 XIRP1Q702N8 1843 aaKnown RBP4.37□□□□□ -1.71
GPNMB-212ENST00000487890 SLIT1O75093 1534 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 LMTK2Q8IWU2 1503 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 UNC13BO14795 1591 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 M0R2C6 588 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 ARNTLO00327 626 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 BRINP1O60477 761 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 SCG5P05408 212 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 LTKP29376 864 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 HSPA1LP34931 641 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 FLT3P36888 993 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 DGKGP49619 791 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 IDI1Q13907 227 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 DPY19L1Q2PZI1 675 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 PIK3R6Q5UE93 754 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 ZCCHC8Q6NZY4 707 aaKnown RBP4.37□□□□□ -1.71
GPNMB-212ENST00000487890 LYPD4Q6UWN0 246 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 UBE2R2Q712K3 238 aaPredicted RBP4.37□□□□□ -1.71
GPNMB-212ENST00000487890 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.37□□□□□ -1.71
GPNMB-212ENST00000487890 TMC3Q7Z5M5 1100 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 SPATS2Q86XZ4 545 aaKnown RBP4.37□□□□□ -1.71
GPNMB-212ENST00000487890 MYO1HQ8N1T3 1032 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 AGGF1Q8N302 714 aaeCLIP4.37□□□□□ -1.71
GPNMB-212ENST00000487890 NXPE1Q8N323 547 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 TTC8Q8TAM2 541 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 MORC4Q8TE76 937 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 DCAF11Q8TEB1 546 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 RNF141Q8WVD5 230 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 USP7Q93009 1102 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 TRIM11Q96F44 468 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 WNK4Q96J92 1243 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 TTC1Q99614 292 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 MCMBPQ9BTE3 642 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 IRX2Q9BZI1 471 aaPredicted RBP4.37□□□□□ -1.71
GPNMB-212ENST00000487890 PUS7LQ9H0K6 701 aaKnown RBP4.37□□□□□ -1.71
GPNMB-212ENST00000487890 ACSS3Q9H6R3 686 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 CRTAC1Q9NQ79 661 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 AASDHPPTQ9NRN7 309 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 NOB1Q9ULX3 412 aaKnown RBP4.37□□□□□ -1.71
GPNMB-212ENST00000487890 MINPP1Q9UNW1 487 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 PCDHA8Q9Y5H6 950 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 KDM5AP29375 1690 aaKnown RBP4.37□□□□□ -1.71
GPNMB-212ENST00000487890 TNKSO95271 1327 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 SPHKAPQ2M3C7 1700 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 TMEM2Q9UHN6 1383 aa4.37□□□□□ -1.71
GPNMB-212ENST00000487890 IQGAP3Q86VI3 1631 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 ZNF891A8MT65 544 aaPredicted RBP4.36□□□□□ -1.71
GPNMB-212ENST00000487890 H0Y8X5 98 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 DYNC1LI2O43237 492 aaPredicted RBP4.36□□□□□ -1.71
GPNMB-212ENST00000487890 PRPF3O43395 683 aaKnown RBP4.36□□□□□ -1.71
GPNMB-212ENST00000487890 ZEB2O60315 1214 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 CPP00450 1065 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 CELA2BP08218 269 aaPredicted RBP4.36□□□□□ -1.71
GPNMB-212ENST00000487890 SLURP2P0DP57 97 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 PYGMP11217 842 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 ATF3P18847 181 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 SCNN1BP51168 640 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 RAC1P63000 192 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 AMPD2Q01433 879 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 GUCY1A3Q02108 690 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 SCRN1Q12765 414 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 GRB10Q13322 594 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 PIN1Q13526 163 aaPredicted RBP4.36□□□□□ -1.71
GPNMB-212ENST00000487890 STYK1Q6J9G0 422 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 GPAT2Q6NUI2 795 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 CDPF1Q6NVV7 123 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 FDX2Q6P4F2 183 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 IGF2-ASQ6U949 168 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 PASD1Q8IV76 773 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 OR2W6PQ8NHA6 318 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 DCAF4Q8WV16 495 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 CHMP4CQ96CF2 233 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 PSMG3-AS1Q96PY0 264 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 ASPNQ9BXN1 380 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 CDH19Q9H159 772 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 IFT22Q9H7X7 185 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.36□□□□□ -1.71
GPNMB-212ENST00000487890 SAMD15Q9P1V8 674 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 DAGLAQ9Y4D2 1042 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 KIF1BO60333 1816 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 NUP155O75694 1391 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 RIMS2Q9UQ26 1411 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 RPRD2Q5VT52 1461 aaKnown RBP4.36□□□□□ -1.71
GPNMB-212ENST00000487890 ARHGAP23Q9P227 1491 aa4.36□□□□□ -1.71
GPNMB-212ENST00000487890 LRRC7Q96NW7 1537 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms