RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 PLEKHO2Q8TD55 490 aa7.89□□□□□ -1.15
USP48-209ENST00000487880 CDIP1Q9H305 208 aa7.89□□□□□ -1.15
USP48-209ENST00000487880 SLC52A2Q9HAB3 445 aa7.89□□□□□ -1.15
USP48-209ENST00000487880 TNFRSF12AQ9NP84 129 aa7.89□□□□□ -1.15
USP48-209ENST00000487880 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.89□□□□□ -1.15
USP48-209ENST00000487880 PCDHA2Q9Y5H9 948 aa7.89□□□□□ -1.15
USP48-209ENST00000487880 CARMIL2Q6F5E8 1435 aa7.88□□□□□ -1.15
USP48-209ENST00000487880 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.88□□□□□ -1.15
USP48-209ENST00000487880 MYO1BO43795 1136 aa7.88□□□□□ -1.15
USP48-209ENST00000487880 SMARCA5O60264 1052 aaPredicted RBP7.88□□□□□ -1.15
USP48-209ENST00000487880 ASMTLO95671 621 aa7.88□□□□□ -1.15
USP48-209ENST00000487880 GLI1P08151 1106 aa7.88□□□□□ -1.15
USP48-209ENST00000487880 HSD3B2P26439 372 aa7.88□□□□□ -1.15
USP48-209ENST00000487880 GTF2A2P52657 109 aa7.88□□□□□ -1.15
USP48-209ENST00000487880 CBX2Q14781 532 aaPredicted RBP7.88□□□□□ -1.15
USP48-209ENST00000487880 TCEA2Q15560 299 aa7.88□□□□□ -1.15
USP48-209ENST00000487880 IFNL3Q8IZI9 196 aa7.88□□□□□ -1.15
USP48-209ENST00000487880 LZTR1Q8N653 840 aa7.88□□□□□ -1.15
USP48-209ENST00000487880 SLC7A14Q8TBB6 771 aa7.88□□□□□ -1.15
USP48-209ENST00000487880 SFMBT1Q9UHJ3 866 aa7.88□□□□□ -1.15
USP48-209ENST00000487880 TRAF6Q9Y4K3 522 aa7.88□□□□□ -1.15
USP48-209ENST00000487880 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.87□□□□□ -1.15
USP48-209ENST00000487880 AQP7O14520 342 aa7.87□□□□□ -1.15
USP48-209ENST00000487880 EFCAB14O75071 495 aa7.87□□□□□ -1.15
USP48-209ENST00000487880 RFPL3O75679 317 aa7.87□□□□□ -1.15
USP48-209ENST00000487880 RAPGEF3O95398 923 aa7.87□□□□□ -1.15
USP48-209ENST00000487880 BCL6P41182 706 aa7.87□□□□□ -1.15
USP48-209ENST00000487880 ERVFRD-1P60508 538 aa7.87□□□□□ -1.15
USP48-209ENST00000487880 CYP4F8P98187 520 aa7.87□□□□□ -1.15
USP48-209ENST00000487880 LSAMPQ13449 338 aa7.87□□□□□ -1.15
USP48-209ENST00000487880 KCNMB1Q16558 191 aa7.87□□□□□ -1.15
USP48-209ENST00000487880 FNDC3BQ53EP0 1204 aaKnown RBP7.87□□□□□ -1.15
USP48-209ENST00000487880 CLUHP3Q96NS8 147 aa7.87□□□□□ -1.15
USP48-209ENST00000487880 FEZ1Q99689 392 aa7.87□□□□□ -1.15
USP48-209ENST00000487880 TRIM39Q9HCM9 518 aa7.87□□□□□ -1.15
USP48-209ENST00000487880 RWDD3Q9Y3V2 267 aa7.87□□□□□ -1.15
USP48-209ENST00000487880 CADPSQ9ULU8 1353 aa7.86□□□□□ -1.15
USP48-209ENST00000487880 ZNF503-AS2A6NEH8 195 aa7.86□□□□□ -1.15
USP48-209ENST00000487880 SRGAP3O43295 1099 aa7.86□□□□□ -1.15
USP48-209ENST00000487880 GLI4P10075 376 aa7.86□□□□□ -1.15
USP48-209ENST00000487880 KRTAP1-3Q8IUG1 177 aa7.86□□□□□ -1.15
USP48-209ENST00000487880 FAM168AQ92567 244 aa7.86□□□□□ -1.15
USP48-209ENST00000487880 INTS4Q96HW7 963 aaKnown RBP7.86□□□□□ -1.15
USP48-209ENST00000487880 NDOR1Q9UHB4 597 aa7.86□□□□□ -1.15
USP48-209ENST00000487880 X6R8D5 127 aa7.86□□□□□ -1.15
USP48-209ENST00000487880 A0A1W2PQ27 194 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 A0A1W2PQ64 194 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 A0A1W2PQC6 194 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 A0A1W2PQD8 194 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 H7BY64 318 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 TAL1P17542 331 aaPredicted RBP7.85□□□□□ -1.15
USP48-209ENST00000487880 FPR2P25090 351 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 TACR1P25103 407 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 ARL4AP40617 200 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 KIZQ2M2Z5 673 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 BRAPQ7Z569 592 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 IRF2BP1Q8IU81 584 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 RIOX2Q8IUF8 465 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 TEX2Q8IWB9 1127 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 SIRT2Q8IXJ6 389 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 SCLYQ96I15 445 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 KRTAP4-12Q9BQ66 201 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 SLC6A17Q9H1V8 727 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 MARCH2Q9P0N8 246 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 CD2APQ9Y5K6 639 aa7.85□□□□□ -1.15
USP48-209ENST00000487880 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.85□□□□□ -1.15
USP48-209ENST00000487880 C22orf46C9J442 243 aa7.84□□□□□ -1.15
USP48-209ENST00000487880 ARVCFO00192 962 aa7.84□□□□□ -1.15
USP48-209ENST00000487880 FUCA1P04066 466 aa7.84□□□□□ -1.15
USP48-209ENST00000487880 PABPC4Q13310 644 aaKnown RBP eCLIP7.84□□□□□ -1.15
USP48-209ENST00000487880 EGFLAMQ63HQ2 1017 aa7.84□□□□□ -1.15
USP48-209ENST00000487880 TMEM169Q96HH4 297 aa7.84□□□□□ -1.15
USP48-209ENST00000487880 LOC105371045A0A1W2PR82 267 aa7.83□□□□□ -1.16
USP48-209ENST00000487880 WNT9AO14904 365 aa7.83□□□□□ -1.16
USP48-209ENST00000487880 CRTAMO95727 393 aa7.83□□□□□ -1.16
USP48-209ENST00000487880 DBHP09172 617 aa7.83□□□□□ -1.16
USP48-209ENST00000487880 NAT1P18440 290 aa7.83□□□□□ -1.16
USP48-209ENST00000487880 LCE3BQ5TA77 95 aa7.83□□□□□ -1.16
USP48-209ENST00000487880 WWC2Q6AWC2 1192 aa7.83□□□□□ -1.16
USP48-209ENST00000487880 CEP68Q76N32 757 aa7.83□□□□□ -1.16
USP48-209ENST00000487880 FGD2Q7Z6J4 655 aa7.83□□□□□ -1.16
USP48-209ENST00000487880 BTG4Q9NY30 223 aa7.83□□□□□ -1.16
USP48-209ENST00000487880 CLDND1Q9NY35 253 aa7.83□□□□□ -1.16
USP48-209ENST00000487880 PPARGC1AQ9UBK2 798 aaKnown RBP7.83□□□□□ -1.16
USP48-209ENST00000487880 RASGRP1O95267 797 aa7.82□□□□□ -1.16
USP48-209ENST00000487880 CYBBP04839 570 aa7.82□□□□□ -1.16
USP48-209ENST00000487880 GRK2P25098 689 aa7.82□□□□□ -1.16
USP48-209ENST00000487880 GRK3P35626 688 aa7.82□□□□□ -1.16
USP48-209ENST00000487880 GUCY1A3Q02108 690 aa7.82□□□□□ -1.16
USP48-209ENST00000487880 DALRD3Q5D0E6 543 aaKnown RBP7.82□□□□□ -1.16
USP48-209ENST00000487880 ADGRF1Q5T601 910 aa7.82□□□□□ -1.16
USP48-209ENST00000487880 MROH9Q5TGP6 573 aa7.82□□□□□ -1.16
USP48-209ENST00000487880 BICRALQ6AI39 1079 aa7.82□□□□□ -1.16
USP48-209ENST00000487880 MCTP1Q6DN14 999 aa7.82□□□□□ -1.16
USP48-209ENST00000487880 MTDHQ86UE4 582 aaKnown RBP7.82□□□□□ -1.16
USP48-209ENST00000487880 NETO2Q8NC67 525 aa7.82□□□□□ -1.16
USP48-209ENST00000487880 NINJ1Q92982 152 aa7.82□□□□□ -1.16
USP48-209ENST00000487880 TRMT2BQ96GJ1 504 aaKnown RBP7.82□□□□□ -1.16
USP48-209ENST00000487880 LIN37Q96GY3 246 aaPredicted RBP7.82□□□□□ -1.16
USP48-209ENST00000487880 ALG1Q9BT22 464 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms