RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 B4GALT4O60513 344 aa27.44■■□□□ 1.98
PLOD3-215ENST00000487563 CFBP00751 764 aa27.44■■□□□ 1.98
PLOD3-215ENST00000487563 PURAQ00577 322 aaKnown RBP27.44■■□□□ 1.98
PLOD3-215ENST00000487563 PSRC1Q6PGN9 363 aaPredicted RBP27.44■■□□□ 1.98
PLOD3-215ENST00000487563 COPS5Q92905 334 aa27.44■■□□□ 1.98
PLOD3-215ENST00000487563 COL20A1Q9P218 1284 aa27.44■■□□□ 1.98
PLOD3-215ENST00000487563 GRM4Q14833 912 aa27.43■■□□□ 1.98
PLOD3-215ENST00000487563 STXBP2Q15833 593 aa27.43■■□□□ 1.98
PLOD3-215ENST00000487563 ARHGEF16Q5VV41 709 aa27.43■■□□□ 1.98
PLOD3-215ENST00000487563 SEPT14Q6ZU15 432 aa27.43■■□□□ 1.98
PLOD3-215ENST00000487563 HOMER1Q86YM7 354 aa27.43■■□□□ 1.98
PLOD3-215ENST00000487563 IWS1Q96ST2 819 aa27.43■■□□□ 1.98
PLOD3-215ENST00000487563 TAF6LQ9Y6J9 622 aa27.43■■□□□ 1.98
PLOD3-215ENST00000487563 LAMA2P24043 3122 aaKnown RBP27.43■■□□□ 1.98
PLOD3-215ENST00000487563 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.42■■□□□ 1.98
PLOD3-215ENST00000487563 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.42■■□□□ 1.98
PLOD3-215ENST00000487563 PALM3A6NDB9 673 aaPredicted RBP27.42■■□□□ 1.98
PLOD3-215ENST00000487563 ZBTB5O15062 677 aa27.42■■□□□ 1.98
PLOD3-215ENST00000487563 KPNA6O60684 536 aa27.42■■□□□ 1.98
PLOD3-215ENST00000487563 ACRP10323 421 aa27.42■■□□□ 1.98
PLOD3-215ENST00000487563 EIF2AK2P19525 551 aaKnown RBP27.42■■□□□ 1.98
PLOD3-215ENST00000487563 FAM47CQ5HY64 1035 aa27.42■■□□□ 1.98
PLOD3-215ENST00000487563 TMEM67Q5HYA8 995 aa27.42■■□□□ 1.98
PLOD3-215ENST00000487563 TMEM240Q5SV17 173 aa27.42■■□□□ 1.98
PLOD3-215ENST00000487563 CHST3Q7LGC8 479 aa27.42■■□□□ 1.98
PLOD3-215ENST00000487563 ALDH8A1Q9H2A2 487 aaPredicted RBP27.42■■□□□ 1.98
PLOD3-215ENST00000487563 SEMA6BQ9H3T3 888 aa27.42■■□□□ 1.98
PLOD3-215ENST00000487563 RBM8AQ9Y5S9 174 aaKnown RBP27.42■■□□□ 1.98
PLOD3-215ENST00000487563 TRAF1Q13077 416 aa27.41■■□□□ 1.98
PLOD3-215ENST00000487563 STOX1Q6ZVD7 989 aa27.41■■□□□ 1.98
PLOD3-215ENST00000487563 MAP4K1Q92918 833 aa27.41■■□□□ 1.98
PLOD3-215ENST00000487563 IL23AQ9NPF7 189 aa27.41■■□□□ 1.98
PLOD3-215ENST00000487563 PCDHA1Q9Y5I3 950 aa27.41■■□□□ 1.98
PLOD3-215ENST00000487563 UMODL1Q5DID0 1318 aa27.41■■□□□ 1.98
PLOD3-215ENST00000487563 COL6A3P12111 3177 aa27.4■■□□□ 1.98
PLOD3-215ENST00000487563 ARIH2O95376 493 aa27.4■■□□□ 1.98
PLOD3-215ENST00000487563 SUPT20HL2P0C7V6 817 aa27.4■■□□□ 1.98
PLOD3-215ENST00000487563 CCL23P55773 120 aa27.4■■□□□ 1.98
PLOD3-215ENST00000487563 ZNF365Q70YC5 407 aa27.4■■□□□ 1.98
PLOD3-215ENST00000487563 C16orf59Q7L2K0 433 aa27.4■■□□□ 1.98
PLOD3-215ENST00000487563 CATIPQ7Z7H3 387 aa27.4■■□□□ 1.98
PLOD3-215ENST00000487563 MTMR8Q96EF0 704 aa27.4■■□□□ 1.98
PLOD3-215ENST00000487563 NOC4LQ9BVI4 516 aaKnown RBP27.4■■□□□ 1.98
PLOD3-215ENST00000487563 SENP2Q9HC62 589 aa27.4■■□□□ 1.98
PLOD3-215ENST00000487563 A6NJR5 290 aa27.39■■□□□ 1.98
PLOD3-215ENST00000487563 GH1P01241 217 aa27.39■■□□□ 1.98
PLOD3-215ENST00000487563 CDX2Q99626 313 aaPredicted RBP27.39■■□□□ 1.98
PLOD3-215ENST00000487563 MTIF3Q9H2K0 278 aaKnown RBP27.39■■□□□ 1.98
PLOD3-215ENST00000487563 PXMP2Q9NR77 195 aa27.39■■□□□ 1.98
PLOD3-215ENST00000487563 TRMT13Q9NUP7 481 aaKnown RBP27.39■■□□□ 1.98
PLOD3-215ENST00000487563 TMEM265A0A087WTH1 108 aa27.38■■□□□ 1.97
PLOD3-215ENST00000487563 PPP1R11O60927 126 aaPredicted RBP27.38■■□□□ 1.97
PLOD3-215ENST00000487563 HSD17B4P51659 736 aa27.38■■□□□ 1.97
PLOD3-215ENST00000487563 CHMP4BP1P59074 171 aa27.38■■□□□ 1.97
PLOD3-215ENST00000487563 NBPF20Q3BBV1 942 aa27.38■■□□□ 1.97
PLOD3-215ENST00000487563 CCDC62Q6P9F0 684 aa27.38■■□□□ 1.97
PLOD3-215ENST00000487563 PIGSQ96S52 555 aa27.38■■□□□ 1.97
PLOD3-215ENST00000487563 TTYH1Q9H313 450 aaPredicted RBP27.38■■□□□ 1.97
PLOD3-215ENST00000487563 NR3C2P08235 984 aa27.37■■□□□ 1.97
PLOD3-215ENST00000487563 DNAJB2P25686 324 aa27.37■■□□□ 1.97
PLOD3-215ENST00000487563 LY6KQ17RY6 165 aa27.37■■□□□ 1.97
PLOD3-215ENST00000487563 CASC1Q6TDU7 716 aa27.37■■□□□ 1.97
PLOD3-215ENST00000487563 MB21D2Q8IYB1 491 aaPredicted RBP27.37■■□□□ 1.97
PLOD3-215ENST00000487563 AFG1LQ8WV93 481 aa27.37■■□□□ 1.97
PLOD3-215ENST00000487563 MAP3K20Q9NYL2 800 aaKnown RBP27.37■■□□□ 1.97
PLOD3-215ENST00000487563 OPLAHO14841 1288 aa27.36■■□□□ 1.97
PLOD3-215ENST00000487563 EIF3JO75822 258 aaKnown RBP27.36■■□□□ 1.97
PLOD3-215ENST00000487563 FGBP02675 491 aa27.36■■□□□ 1.97
PLOD3-215ENST00000487563 CYP2C9P11712 490 aa27.36■■□□□ 1.97
PLOD3-215ENST00000487563 ANTXR2P58335 489 aa27.36■■□□□ 1.97
PLOD3-215ENST00000487563 TROAPQ12815 778 aa27.36■■□□□ 1.97
PLOD3-215ENST00000487563 WNT8AQ9H1J5 351 aa27.36■■□□□ 1.97
PLOD3-215ENST00000487563 RIOX1Q9H6W3 641 aa27.36■■□□□ 1.97
PLOD3-215ENST00000487563 MRVI1Q9Y6F6 885 aa27.36■■□□□ 1.97
PLOD3-215ENST00000487563 SCN10AQ9Y5Y9 1956 aa27.35■■□□□ 1.97
PLOD3-215ENST00000487563 MYCLP12524 364 aaPredicted RBP27.35■■□□□ 1.97
PLOD3-215ENST00000487563 HOXA13P31271 388 aaPredicted RBP27.35■■□□□ 1.97
PLOD3-215ENST00000487563 GHRHRQ02643 423 aa27.35■■□□□ 1.97
PLOD3-215ENST00000487563 ARHGAP1Q07960 439 aa27.35■■□□□ 1.97
PLOD3-215ENST00000487563 NFRKBQ6P4R8 1299 aa27.35■■□□□ 1.97
PLOD3-215ENST00000487563 SAMD3Q8N6K7 520 aa27.35■■□□□ 1.97
PLOD3-215ENST00000487563 PPP1R13LQ8WUF5 828 aa27.35■■□□□ 1.97
PLOD3-215ENST00000487563 NOD1Q9Y239 953 aa27.35■■□□□ 1.97
PLOD3-215ENST00000487563 KIAA1217Q5T5P2 1943 aa27.34■■□□□ 1.97
PLOD3-215ENST00000487563 PNMA6FA0A0J9YX94 578 aa27.34■■□□□ 1.97
PLOD3-215ENST00000487563 GCOM1H8Y6P7 765 aaPredicted RBP27.34■■□□□ 1.97
PLOD3-215ENST00000487563 MMP3P08254 477 aa27.34■■□□□ 1.97
PLOD3-215ENST00000487563 POLR2MP0CAP2 368 aa27.34■■□□□ 1.97
PLOD3-215ENST00000487563 SLC35G1Q2M3R5 365 aa27.34■■□□□ 1.97
PLOD3-215ENST00000487563 RASIP1Q5U651 963 aa27.34■■□□□ 1.97
PLOD3-215ENST00000487563 RPUSD2Q8IZ73 545 aaKnown RBP27.34■■□□□ 1.97
PLOD3-215ENST00000487563 CTCFLQ8NI51 663 aaPredicted RBP27.34■■□□□ 1.97
PLOD3-215ENST00000487563 IGDCC4Q8TDY8 1250 aa27.34■■□□□ 1.97
PLOD3-215ENST00000487563 PIBF1Q8WXW3 757 aa27.34■■□□□ 1.97
PLOD3-215ENST00000487563 MYLIPQ8WY64 445 aa27.34■■□□□ 1.97
PLOD3-215ENST00000487563 HERVK_113Q902F9 699 aa27.34■■□□□ 1.97
PLOD3-215ENST00000487563 TIFAQ96CG3 184 aa27.34■■□□□ 1.97
PLOD3-215ENST00000487563 SCLYQ96I15 445 aa27.34■■□□□ 1.97
PLOD3-215ENST00000487563 ESYT1Q9BSJ8 1104 aa27.34■■□□□ 1.97
PLOD3-215ENST00000487563 PRC1O43663 620 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms