RNA–Protein interactions for RNA: ENST00000487275.1

ZNF541-204, Transcript of zinc finger protein 541, humanhuman

TSL 3

Gene ZNF541, Length 579 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-204ENST00000487275 CCDC34Q96HJ3 373 aa9.09□□□□□ -0.95
ZNF541-204ENST00000487275 TIGD1Q96MW7 591 aa9.09□□□□□ -0.95
ZNF541-204ENST00000487275 P2RX7Q99572 595 aaKnown RBP9.09□□□□□ -0.95
ZNF541-204ENST00000487275 PYM1Q9BRP8 204 aaKnown RBP9.09□□□□□ -0.95
ZNF541-204ENST00000487275 RAB34Q9BZG1 259 aa9.09□□□□□ -0.95
ZNF541-204ENST00000487275 ACAD9Q9H845 621 aa9.09□□□□□ -0.95
ZNF541-204ENST00000487275 PNMA3Q9UL41 463 aa9.09□□□□□ -0.95
ZNF541-204ENST00000487275 ZNF214Q9UL59 606 aaPredicted RBP9.09□□□□□ -0.95
ZNF541-204ENST00000487275 LOC285556D6RIA3 1793 aa9.09□□□□□ -0.95
ZNF541-204ENST00000487275 CCL15-CCL14A0A0B4J2E2 113 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 GOLGA6L3A6NEY3 463 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 POLR2DO15514 142 aaKnown RBP9.08□□□□□ -0.96
ZNF541-204ENST00000487275 CIITAP33076 1130 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 UBA7P41226 1012 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 TXKP42681 527 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 HUNKP57058 714 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 HERVK_113P62684 666 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 RPS6P62753 249 aaKnown RBP9.08□□□□□ -0.96
ZNF541-204ENST00000487275 MOGSQ13724 837 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 IL17AQ16552 155 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 CCL15Q16663 113 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 Q4G0T1 1027 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 PRR16Q569H4 304 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 SPRYD7Q5W111 196 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 CST9Q5W186 159 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 GPAT2Q6NUI2 795 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 CKAP2LQ8IYA6 745 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 CNNM3Q8NE01 707 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 CHST13Q8NET6 341 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 RASSF8Q8NHQ8 419 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 SYTL5Q8TDW5 730 aaPredicted RBP9.08□□□□□ -0.96
ZNF541-204ENST00000487275 GTF3C2Q8WUA4 911 aaPredicted RBP9.08□□□□□ -0.96
ZNF541-204ENST00000487275 CRYGNQ8WXF5 182 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 EPSTI1Q96J88 318 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 AK8Q96MA6 479 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 MBOAT7Q96N66 472 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 MTMR9Q96QG7 549 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 PAGR1Q9BTK6 254 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 MAF1Q9H063 256 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 TSPY26PQ9H489 355 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 FBXO40Q9UH90 709 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 USP25Q9UHP3 1055 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 HOOK1Q9UJC3 728 aaKnown RBP9.08□□□□□ -0.96
ZNF541-204ENST00000487275 RIPK3Q9Y572 518 aa9.08□□□□□ -0.96
ZNF541-204ENST00000487275 PTPRFP10586 1907 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 TBX3O15119 743 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 SLC25A27O95847 323 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 CCDC192P0DO97 292 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 ZBTB48P10074 688 aaPredicted RBP9.07□□□□□ -0.96
ZNF541-204ENST00000487275 COPB2P35606 906 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 TECP42680 631 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 FXR2P51116 673 aaKnown RBP eCLIP9.07□□□□□ -0.96
ZNF541-204ENST00000487275 UBXN2AP68543 259 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 BAATQ14032 418 aaPredicted RBP9.07□□□□□ -0.96
ZNF541-204ENST00000487275 ARHGEF16Q5VV41 709 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 KANK3Q6NY19 840 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 SASS6Q6UVJ0 657 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 SLC30A10Q6XR72 485 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 KRBA2Q6ZNG9 492 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 RBM43Q6ZSC3 357 aaKnown RBP9.07□□□□□ -0.96
ZNF541-204ENST00000487275 USP49Q70CQ1 688 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 CABP7Q86V35 215 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 NCAPG2Q86XI2 1143 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 RIOX2Q8IUF8 465 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 SLFN12Q8IYM2 578 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 CEP57L1Q8IYX8 460 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 PDILTQ8N807 584 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 SMC1BQ8NDV3 1235 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 DHX58Q96C10 678 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 MS4A4AQ96JQ5 239 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 PANK2Q9BZ23 570 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 SPATC1LQ9H0A9 340 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 BTBD7Q9P203 1132 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 COL20A1Q9P218 1284 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 CCDC39Q9UFE4 941 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 SERTAD1Q9UHV2 236 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 SLC45A1Q9Y2W3 748 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 PARP14Q460N5 1801 aa9.07□□□□□ -0.96
ZNF541-204ENST00000487275 RPTORQ8N122 1335 aa9.06□□□□□ -0.96
ZNF541-204ENST00000487275 RLFQ13129 1914 aa9.06□□□□□ -0.96
ZNF541-204ENST00000487275 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.06□□□□□ -0.96
ZNF541-204ENST00000487275 PP2D1A8MPX8 630 aa9.06□□□□□ -0.96
ZNF541-204ENST00000487275 BTBD19C9JJ37 291 aa9.06□□□□□ -0.96
ZNF541-204ENST00000487275 FAM86B1E9PN63 330 aa9.06□□□□□ -0.96
ZNF541-204ENST00000487275 PDHXO00330 501 aa9.06□□□□□ -0.96
ZNF541-204ENST00000487275 CNMDO75829 334 aa9.06□□□□□ -0.96
ZNF541-204ENST00000487275 FAM86B2P0C5J1 330 aa9.06□□□□□ -0.96
ZNF541-204ENST00000487275 EIF2AK2P19525 551 aaKnown RBP9.06□□□□□ -0.96
ZNF541-204ENST00000487275 ZNF157P51786 506 aaPredicted RBP9.06□□□□□ -0.96
ZNF541-204ENST00000487275 SETQ01105 290 aaPredicted RBP9.06□□□□□ -0.96
ZNF541-204ENST00000487275 ZRSR1Q15695 479 aaKnown RBP9.06□□□□□ -0.96
ZNF541-204ENST00000487275 LONRF3Q496Y0 759 aa9.06□□□□□ -0.96
ZNF541-204ENST00000487275 CEP55Q53EZ4 464 aa9.06□□□□□ -0.96
ZNF541-204ENST00000487275 RRAGBQ5VZM2 374 aa9.06□□□□□ -0.96
ZNF541-204ENST00000487275 ANKRD23Q86SG2 305 aa9.06□□□□□ -0.96
ZNF541-204ENST00000487275 PLA2G4DQ86XP0 818 aa9.06□□□□□ -0.96
ZNF541-204ENST00000487275 RASAL3Q86YV0 1011 aa9.06□□□□□ -0.96
ZNF541-204ENST00000487275 ELOA2Q8IYF1 753 aaPredicted RBP9.06□□□□□ -0.96
ZNF541-204ENST00000487275 IQUBQ8NA54 791 aa9.06□□□□□ -0.96
ZNF541-204ENST00000487275 SMCR8Q8TEV9 937 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms