RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 SAFBQ15424 915 aaKnown RBP eCLIP6.35□□□□□ -1.39
SF1-217ENST00000486960 MAP3K11Q16584 847 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 MTERF2Q49AM1 385 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 PERM1Q5SV97 790 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 ISM2Q6H9L7 571 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 ERMP1Q7Z2K6 904 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 MIGA1Q8NAN2 632 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 TIFAQ96CG3 184 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 TNIP3Q96KP6 325 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 POLR3CQ9BUI4 534 aaPredicted RBP6.35□□□□□ -1.39
SF1-217ENST00000486960 TRIM6Q9C030 488 aaPredicted RBP6.35□□□□□ -1.39
SF1-217ENST00000486960 YY1AP1Q9H869 796 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 FBRSQ9HAH7 460 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 NLRC4Q9NPP4 1024 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 PNMA8BQ9ULN7 279 aaPredicted RBP6.35□□□□□ -1.39
SF1-217ENST00000486960 PCDHGC3Q9UN70 934 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 KIAA1024Q9UPX6 916 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 SCN7AQ01118 1682 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 FAM208BQ5VWN6 2430 aa6.35□□□□□ -1.39
SF1-217ENST00000486960 PTPRZ1P23471 2315 aaPredicted RBP6.34□□□□□ -1.39
SF1-217ENST00000486960 MAP3K19Q56UN5 1328 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 PCDH11XQ9BZA7 1347 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 PCDH11YQ9BZA8 1340 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 A0A087X0B3 334 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 TMEM110-MUSTN1A8MSY1 372 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 BAG2O95816 211 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 ZSCAN20P17040 1043 aaPredicted RBP6.34□□□□□ -1.39
SF1-217ENST00000486960 ATF7P17544 494 aaPredicted RBP6.34□□□□□ -1.39
SF1-217ENST00000486960 CTNNA1P35221 906 aaKnown RBP6.34□□□□□ -1.39
SF1-217ENST00000486960 MAGEA10P43363 369 aaPredicted RBP6.34□□□□□ -1.39
SF1-217ENST00000486960 CRKLP46109 303 aaKnown RBP6.34□□□□□ -1.39
SF1-217ENST00000486960 STT3AP46977 705 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 EIF1AXP47813 144 aaKnown RBP6.34□□□□□ -1.39
SF1-217ENST00000486960 TRPC1P48995 793 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 COPAP53621 1224 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 EMP3P54852 163 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 CASP7P55210 303 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 PFKPQ01813 784 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 SATB1Q01826 763 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 RILPL1Q5EBL4 403 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 ARSIQ5FYB1 569 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 RNF20Q5VTR2 975 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 HIBCHQ6NVY1 386 aaPredicted RBP6.34□□□□□ -1.39
SF1-217ENST00000486960 C16orf87Q6PH81 154 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 C1orf122Q6ZSJ8 110 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 MOB2Q70IA6 237 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 NECAB2Q7Z6G3 386 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 PHTF2Q8N3S3 785 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 C2orf69Q8N8R5 385 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 NAXEQ8NCW5 288 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 RIN3Q8TB24 985 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 MTMR8Q96EF0 704 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 MRPL9Q9BYD2 267 aaKnown RBP6.34□□□□□ -1.39
SF1-217ENST00000486960 OSBPL5Q9H0X9 879 aaPredicted RBP6.34□□□□□ -1.39
SF1-217ENST00000486960 ABCG4Q9H172 646 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 DBNDD1Q9H9R9 158 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 ZSWIM6Q9HCJ5 1215 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 GINM1Q9NU53 330 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 EPS15L1Q9UBC2 864 aa6.34□□□□□ -1.39
SF1-217ENST00000486960 ZMYND8Q9ULU4 1186 aaPredicted RBP6.34□□□□□ -1.39
SF1-217ENST00000486960 BPTFQ12830 3046 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 RCCD1A6NED2 376 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 IRS4O14654 1257 aaPredicted RBP6.33□□□□□ -1.4
SF1-217ENST00000486960 TOR1BO14657 336 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 TPPPO94811 219 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 CNOT4O95628 575 aaKnown RBP6.33□□□□□ -1.4
SF1-217ENST00000486960 EGFRP00533 1210 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 HSPA5P11021 654 aaKnown RBP6.33□□□□□ -1.4
SF1-217ENST00000486960 NEFHP12036 1026 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 HOXB3P14651 431 aaPredicted RBP6.33□□□□□ -1.4
SF1-217ENST00000486960 GLULP15104 373 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 SOX9P48436 509 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 GTF2A2P52657 109 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 SH3BGRP55822 239 aaPredicted RBP6.33□□□□□ -1.4
SF1-217ENST00000486960 GTF2IP78347 998 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 KRT83P78385 493 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 DDR2Q16832 855 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 SLC9C1Q4G0N8 1177 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 TMEM31Q5JXX7 168 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 SAMD7Q7Z3H4 446 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 NKAPQ8N5F7 415 aaKnown RBP6.33□□□□□ -1.4
SF1-217ENST00000486960 CELF2-AS1Q8N7Q2 184 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 TTC13Q8NBP0 860 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 IL17REQ8NFR9 667 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 TRIM63Q969Q1 353 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 MARVELD3Q96A59 401 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 SH3KBP1Q96B97 665 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 PPM1MQ96MI6 270 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 EIF2AK1Q9BQI3 630 aaKnown RBP6.33□□□□□ -1.4
SF1-217ENST00000486960 YIPF4Q9BSR8 244 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 CENPOQ9BU64 300 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 HTATIP2Q9BUP3 242 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 TTYH1Q9H313 450 aaPredicted RBP6.33□□□□□ -1.4
SF1-217ENST00000486960 COPRSQ9NQ92 184 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 ST7Q9NRC1 585 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 DIAPH3Q9NSV4 1193 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 PDRG1Q9NUG6 133 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 SLC5A4Q9NY91 659 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 ARHGAP28Q9P2N2 729 aa6.33□□□□□ -1.4
SF1-217ENST00000486960 ZFYVE26Q68DK2 2539 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms