RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, human

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNRNP40-205	ENST00000486941	MCMBP	Q9BTE3	642 aa		6.29	□□□□□ -1.4
SNRNP40-205	ENST00000486941	ADAM7	Q9H2U9	754 aa		6.29	□□□□□ -1.4
SNRNP40-205	ENST00000486941	GP6	Q9HCN6	339 aa		6.29	□□□□□ -1.4
SNRNP40-205	ENST00000486941	FAM86C1	Q9NVL1	165 aa		6.29	□□□□□ -1.4
SNRNP40-205	ENST00000486941	INO80	Q9ULG1	1556 aa	Predicted RBP	6.29	□□□□□ -1.4
SNRNP40-205	ENST00000486941	PPT2	Q9UMR5	302 aa		6.29	□□□□□ -1.4
SNRNP40-205	ENST00000486941	PCDHGB7	Q9Y5F8	929 aa		6.29	□□□□□ -1.4
SNRNP40-205	ENST00000486941	ADGB	Q8N7X0	1667 aa		6.29	□□□□□ -1.4
SNRNP40-205	ENST00000486941	MTUS2	Q5JR59	1369 aa		6.29	□□□□□ -1.4
SNRNP40-205	ENST00000486941	DISP3	Q9P2K9	1392 aa		6.29	□□□□□ -1.4
SNRNP40-205	ENST00000486941	LTBP3	Q9NS15	1303 aa		6.28	□□□□□ -1.4
SNRNP40-205	ENST00000486941	PTPRK	Q15262	1439 aa		6.28	□□□□□ -1.4
SNRNP40-205	ENST00000486941	FGF10	O15520	208 aa	Predicted RBP	6.28	□□□□□ -1.4
SNRNP40-205	ENST00000486941	PLA2G1B	P04054	148 aa	Known RBP	6.28	□□□□□ -1.4
SNRNP40-205	ENST00000486941	TP53	P04637	393 aa	Predicted RBP	6.28	□□□□□ -1.4
SNRNP40-205	ENST00000486941	ATF2	P15336	505 aa		6.28	□□□□□ -1.4
SNRNP40-205	ENST00000486941	RACK1	P63244	317 aa	Known RBP	6.28	□□□□□ -1.4
SNRNP40-205	ENST00000486941	ZNF200	P98182	395 aa	Predicted RBP	6.28	□□□□□ -1.4
SNRNP40-205	ENST00000486941	GGT6	Q6P531	493 aa		6.28	□□□□□ -1.4
SNRNP40-205	ENST00000486941	UNC5A	Q6ZN44	842 aa		6.28	□□□□□ -1.4
SNRNP40-205	ENST00000486941	CCDC144CP	Q8IYA2	1237 aa		6.28	□□□□□ -1.4
SNRNP40-205	ENST00000486941	TAB3	Q8N5C8	712 aa	Predicted RBP	6.28	□□□□□ -1.4
SNRNP40-205	ENST00000486941	TMEM87A	Q8NBN3	555 aa		6.28	□□□□□ -1.4
SNRNP40-205	ENST00000486941	BACH2	Q9BYV9	841 aa		6.28	□□□□□ -1.4
SNRNP40-205	ENST00000486941	FBLN5	Q9UBX5	448 aa		6.28	□□□□□ -1.4
SNRNP40-205	ENST00000486941	ZNF142	P52746	1687 aa	Predicted RBP	6.28	□□□□□ -1.4
SNRNP40-205	ENST00000486941	PLA2R1	Q13018	1463 aa		6.28	□□□□□ -1.4
SNRNP40-205	ENST00000486941	RTEL1-TNFRSF6B	F6WH68	1400 aa		6.27	□□□□□ -1.41
SNRNP40-205	ENST00000486941	CBFA2T2	O43439	604 aa		6.27	□□□□□ -1.41
SNRNP40-205	ENST00000486941	DBH	P09172	617 aa		6.27	□□□□□ -1.41
SNRNP40-205	ENST00000486941	IFNGR1	P15260	489 aa		6.27	□□□□□ -1.41
SNRNP40-205	ENST00000486941	ZNF16	P17020	682 aa	Predicted RBP	6.27	□□□□□ -1.41
SNRNP40-205	ENST00000486941	ARL4A	P40617	200 aa		6.27	□□□□□ -1.41
SNRNP40-205	ENST00000486941	MAPKAPK2	P49137	400 aa		6.27	□□□□□ -1.41
SNRNP40-205	ENST00000486941	FANCC	Q00597	558 aa		6.27	□□□□□ -1.41
SNRNP40-205	ENST00000486941	VWA3B	Q502W6	1294 aa		6.27	□□□□□ -1.41
SNRNP40-205	ENST00000486941	ADGRG2	Q8IZP9	1017 aa		6.27	□□□□□ -1.41
SNRNP40-205	ENST00000486941	LINC01356	Q8N9X3	169 aa		6.27	□□□□□ -1.41
SNRNP40-205	ENST00000486941	DSCC1	Q9BVC3	393 aa		6.27	□□□□□ -1.41
SNRNP40-205	ENST00000486941	MBD5	Q9P267	1494 aa		6.27	□□□□□ -1.41
SNRNP40-205	ENST00000486941	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	6.27	□□□□□ -1.41
SNRNP40-205	ENST00000486941	ZNF644	Q9H582	1327 aa	Predicted RBP	6.26	□□□□□ -1.41
SNRNP40-205	ENST00000486941	MYO3A	Q8NEV4	1616 aa		6.26	□□□□□ -1.41
SNRNP40-205	ENST00000486941		A0A1B0GTL3	188 aa		6.26	□□□□□ -1.41
SNRNP40-205	ENST00000486941	PPP1R11	O60927	126 aa	Predicted RBP	6.26	□□□□□ -1.41
SNRNP40-205	ENST00000486941	SYN1	P17600	705 aa		6.26	□□□□□ -1.41
SNRNP40-205	ENST00000486941	CD247	P20963	164 aa		6.26	□□□□□ -1.41
SNRNP40-205	ENST00000486941	ZNF326	Q5BKZ1	582 aa	Known RBP	6.26	□□□□□ -1.41
SNRNP40-205	ENST00000486941	DHRS1	Q96LJ7	313 aa		6.26	□□□□□ -1.41
SNRNP40-205	ENST00000486941	DHX29	Q7Z478	1369 aa	Known RBP	6.26	□□□□□ -1.41
SNRNP40-205	ENST00000486941	TCOF1	Q13428	1488 aa	Known RBP	6.26	□□□□□ -1.41
SNRNP40-205	ENST00000486941	TIAM1	Q13009	1591 aa		6.26	□□□□□ -1.41
SNRNP40-205	ENST00000486941	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	6.25	□□□□□ -1.41
SNRNP40-205	ENST00000486941	CEP162	Q5TB80	1403 aa		6.25	□□□□□ -1.41
SNRNP40-205	ENST00000486941	EHBP1L1	Q8N3D4	1523 aa		6.25	□□□□□ -1.41
SNRNP40-205	ENST00000486941	PRICKLE3	O43900	615 aa	Predicted RBP	6.25	□□□□□ -1.41
SNRNP40-205	ENST00000486941	SASH1	O94885	1247 aa		6.25	□□□□□ -1.41
SNRNP40-205	ENST00000486941	DLX2	Q07687	328 aa	Predicted RBP	6.25	□□□□□ -1.41
SNRNP40-205	ENST00000486941	FIBCD1	Q8N539	461 aa		6.25	□□□□□ -1.41
SNRNP40-205	ENST00000486941	RBBP8NL	Q8NC74	664 aa	Predicted RBP	6.25	□□□□□ -1.41
SNRNP40-205	ENST00000486941	RXFP1	Q9HBX9	757 aa		6.25	□□□□□ -1.41
SNRNP40-205	ENST00000486941	LUC7L	Q9NQ29	371 aa	Known RBP	6.25	□□□□□ -1.41
SNRNP40-205	ENST00000486941	FHOD1	Q9Y613	1164 aa		6.25	□□□□□ -1.41
SNRNP40-205	ENST00000486941	A2ML1	A8K2U0	1454 aa		6.25	□□□□□ -1.41
SNRNP40-205	ENST00000486941	SPATA31D1	Q6ZQQ2	1576 aa		6.24	□□□□□ -1.41
SNRNP40-205	ENST00000486941	KIF3B	O15066	747 aa		6.24	□□□□□ -1.41
SNRNP40-205	ENST00000486941	ENDOU	P21128	410 aa	Known RBP	6.24	□□□□□ -1.41
SNRNP40-205	ENST00000486941	TACR1	P25103	407 aa		6.24	□□□□□ -1.41
SNRNP40-205	ENST00000486941	HLA-DQA1	Q5Y7H0	255 aa		6.24	□□□□□ -1.41
SNRNP40-205	ENST00000486941	OLFML2B	Q68BL8	750 aa		6.24	□□□□□ -1.41
SNRNP40-205	ENST00000486941	ZC3H14	Q6PJT7	736 aa	Known RBP	6.24	□□□□□ -1.41
SNRNP40-205	ENST00000486941	GGN	Q86UU5	652 aa		6.24	□□□□□ -1.41
SNRNP40-205	ENST00000486941	USP48	Q86UV5	1035 aa		6.24	□□□□□ -1.41
SNRNP40-205	ENST00000486941	LSR	Q86X29	649 aa	Predicted RBP	6.24	□□□□□ -1.41
SNRNP40-205	ENST00000486941	PTCHD1	Q96NR3	888 aa		6.24	□□□□□ -1.41
SNRNP40-205	ENST00000486941	TM9SF2	Q99805	663 aa		6.24	□□□□□ -1.41
SNRNP40-205	ENST00000486941	BCAS3	Q9H6U6	928 aa		6.24	□□□□□ -1.41
SNRNP40-205	ENST00000486941	ZNF214	Q9UL59	606 aa	Predicted RBP	6.24	□□□□□ -1.41
SNRNP40-205	ENST00000486941	DNMT1	P26358	1616 aa	Known RBP	6.24	□□□□□ -1.41
SNRNP40-205	ENST00000486941	FAM135A	Q9P2D6	1515 aa		6.24	□□□□□ -1.41
SNRNP40-205	ENST00000486941	ZC3H12D	A2A288	527 aa	Known RBP	6.23	□□□□□ -1.41
SNRNP40-205	ENST00000486941	SRGAP3	O43295	1099 aa		6.23	□□□□□ -1.41
SNRNP40-205	ENST00000486941	GUCY2C	P25092	1073 aa		6.23	□□□□□ -1.41
SNRNP40-205	ENST00000486941	ZNF76	P36508	570 aa		6.23	□□□□□ -1.41
SNRNP40-205	ENST00000486941	ITGAE	P38570	1179 aa		6.23	□□□□□ -1.41
SNRNP40-205	ENST00000486941	MC3R	P41968	323 aa		6.23	□□□□□ -1.41
SNRNP40-205	ENST00000486941	SLURP1	P55000	103 aa		6.23	□□□□□ -1.41
SNRNP40-205	ENST00000486941	HTRA3	P83110	453 aa		6.23	□□□□□ -1.41
SNRNP40-205	ENST00000486941	PRR5	P85299	388 aa		6.23	□□□□□ -1.41
SNRNP40-205	ENST00000486941	NR1I3	Q14994	352 aa		6.23	□□□□□ -1.41
SNRNP40-205	ENST00000486941	PAQR3	Q6TCH7	311 aa		6.23	□□□□□ -1.41
SNRNP40-205	ENST00000486941	PDLIM7	Q9NR12	457 aa		6.23	□□□□□ -1.41
SNRNP40-205	ENST00000486941	DDX41	Q9UJV9	622 aa	Known RBP	6.23	□□□□□ -1.41
SNRNP40-205	ENST00000486941	WASHC2C	Q9Y4E1	1318 aa		6.23	□□□□□ -1.41
SNRNP40-205	ENST00000486941	CCDC141	Q6ZP82	1450 aa		6.22	□□□□□ -1.41
SNRNP40-205	ENST00000486941	POLR1A	O95602	1720 aa	Predicted RBP	6.22	□□□□□ -1.41
SNRNP40-205	ENST00000486941	TNR	Q92752	1358 aa		6.22	□□□□□ -1.41
SNRNP40-205	ENST00000486941	CYBB	P04839	570 aa		6.22	□□□□□ -1.41
SNRNP40-205	ENST00000486941	TSPY4	P0CV99	314 aa		6.22	□□□□□ -1.41
SNRNP40-205	ENST00000486941	TSPY10	P0CW01	314 aa		6.22	□□□□□ -1.41

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