RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 UBN2Q6ZU65 1347 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 SYNRGQ9UMZ2 1314 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 VGLL3A8MV65 326 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 EFSO43281 561 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 RANBP6O60518 1105 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 FGAP02671 866 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 MYL6BP14649 208 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 MCM3P25205 808 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 MARCKSP29966 332 aaPredicted RBP5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 LIFRP42702 1097 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 MAGEA9P43362 315 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 LMAN1P49257 510 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 SNRPNP63162 240 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 PIP4K2BP78356 416 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 GOLGA8FQ08AF8 430 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 GOLGA8DPQ0D2H9 430 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 SFSWAPQ12872 951 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 CUL4BQ13620 913 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 LAMC2Q13753 1193 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 GNL2Q13823 731 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 TRIM29Q14134 588 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 TRIM14Q14142 442 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 GRIN2CQ14957 1233 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 ALX1Q15699 326 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 NOM1Q5C9Z4 860 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 RILPL1Q5EBL4 403 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 FAM182BQ5T319 152 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 SPATA1Q5VX52 437 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 APOA5Q6Q788 366 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 RAD9BQ6WBX8 426 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 TMTC1Q8IUR5 882 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 NOSTRINQ8IVI9 506 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 ZNF280CQ8ND82 737 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 CTCFLQ8NI51 663 aaPredicted RBP5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 WASF1Q92558 559 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 CCDC97Q96F63 343 aaPredicted RBP5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 DCAF5Q96JK2 942 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 SUSD3Q96L08 255 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 MED15Q96RN5 788 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 CTAGE1Q96RT6 745 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 DESI2Q9BSY9 194 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 EPC1Q9H2F5 836 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 FOXP1Q9H334 677 aaPredicted RBP5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 PDE11AQ9HCR9 933 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 BRMS1Q9HCU9 246 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 ZCCHC17Q9NP64 241 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 BRD7Q9NPI1 651 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 ADD3Q9UEY8 706 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 RSPH14Q9UHP6 348 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 LCMT1Q9UIC8 334 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 NOVA2Q9UNW9 492 aaKnown RBP5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 AKAP2Q9Y2D5 859 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 MYH7P12883 1935 aa5.3□□□□□ -1.56
SMARCC1-206ENST00000485737 ATXN2Q99700 1313 aaKnown RBP5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 PLCH1Q4KWH8 1693 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 RREB1Q92766 1687 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 TARSL2A2RTX5 802 aaKnown RBP5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 CTAGE15A4D2H0 777 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 CTAGE9A4FU28 777 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 SOWAHDA6NJG2 315 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 GOLGA8AA7E2F4 631 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 ZNF213O14771 459 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 FOXN1O15353 648 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 GPAA1O43292 621 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 ZBTB43O43298 467 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 SHOX2O60902 331 aaPredicted RBP5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 MMP1P03956 469 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 CTAGE8P0CG41 777 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 EPXP11678 715 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 IFNAR1P17181 557 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 IGFBP4P22692 258 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 ARHGAP25P42331 645 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 ADKP55263 362 aaKnown RBP5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 CORO7P57737 925 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 HAND2P61296 217 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 VSNL1P62760 191 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 SPAG1Q07617 926 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 TRDNQ13061 729 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 SLC39A6Q13433 755 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 CASP8Q14790 479 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 KARSQ15046 597 aaKnown RBP5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 ZNF468Q5VIY5 522 aaPredicted RBP5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 ICE2Q659A1 982 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 CYB5RLQ6IPT4 315 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 ZNF662Q6ZS27 426 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 RAB44Q7Z6P3 723 aaPredicted RBP5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 SYT9Q86SS6 491 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 C14orf37Q86TY3 774 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 CTAGE6Q86UF2 777 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 TBC1D10CQ8IV04 446 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 CTAGE4Q8IX94 777 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 IFNL2Q8IZJ0 200 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 TTC5Q8N0Z6 440 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 STAG2Q8N3U4 1231 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 PDILTQ8N807 584 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 IGSF22Q8N9C0 903 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 C7orf43Q8WVR3 580 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 RAPGEF4Q8WZA2 1011 aa5.29□□□□□ -1.56
SMARCC1-206ENST00000485737 RUBCNQ92622 972 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms