RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 NT5C2P49902 561 aa22.37■■□□□ 1.17
NDUFA3-213ENST00000484103 PURAQ00577 322 aaKnown RBP22.37■■□□□ 1.17
NDUFA3-213ENST00000484103 TMEM240Q5SV17 173 aa22.37■■□□□ 1.17
NDUFA3-213ENST00000484103 ZNF365Q70YC5 407 aa22.37■■□□□ 1.17
NDUFA3-213ENST00000484103 SLC43A3Q8NBI5 491 aa22.37■■□□□ 1.17
NDUFA3-213ENST00000484103 SCFD2Q8WU76 684 aa22.37■■□□□ 1.17
NDUFA3-213ENST00000484103 MYLIPQ8WY64 445 aa22.37■■□□□ 1.17
NDUFA3-213ENST00000484103 RMDN3Q96TC7 470 aa22.37■■□□□ 1.17
NDUFA3-213ENST00000484103 MAD2L2Q9UI95 211 aa22.37■■□□□ 1.17
NDUFA3-213ENST00000484103 MRPL11Q9Y3B7 192 aaKnown RBP22.37■■□□□ 1.17
NDUFA3-213ENST00000484103 MYH6P13533 1939 aa22.37■■□□□ 1.17
NDUFA3-213ENST00000484103 RBM47A0AV96 593 aaKnown RBP22.36■■□□□ 1.17
NDUFA3-213ENST00000484103 ERICH2A1L162 156 aa22.36■■□□□ 1.17
NDUFA3-213ENST00000484103 B4DLN1 442 aa22.36■■□□□ 1.17
NDUFA3-213ENST00000484103 E7EWF7 191 aa22.36■■□□□ 1.17
NDUFA3-213ENST00000484103 SGSM2O43147 1006 aa22.36■■□□□ 1.17
NDUFA3-213ENST00000484103 SORBS3O60504 671 aa22.36■■□□□ 1.17
NDUFA3-213ENST00000484103 MRPL12P52815 198 aaKnown RBP22.36■■□□□ 1.17
NDUFA3-213ENST00000484103 LY6KQ17RY6 165 aa22.36■■□□□ 1.17
NDUFA3-213ENST00000484103 ARHGEF16Q5VV41 709 aa22.36■■□□□ 1.17
NDUFA3-213ENST00000484103 STOX1Q6ZVD7 989 aa22.36■■□□□ 1.17
NDUFA3-213ENST00000484103 MCF2L2Q86YR7 1114 aa22.36■■□□□ 1.17
NDUFA3-213ENST00000484103 SCLYQ96I15 445 aa22.36■■□□□ 1.17
NDUFA3-213ENST00000484103 ALDH8A1Q9H2A2 487 aaPredicted RBP22.36■■□□□ 1.17
NDUFA3-213ENST00000484103 POLR3EQ9NVU0 708 aa22.36■■□□□ 1.17
NDUFA3-213ENST00000484103 PPP1R11O60927 126 aaPredicted RBP22.35■■□□□ 1.17
NDUFA3-213ENST00000484103 HOXA13P31271 388 aaPredicted RBP22.35■■□□□ 1.17
NDUFA3-213ENST00000484103 TTLL4Q14679 1199 aa22.35■■□□□ 1.17
NDUFA3-213ENST00000484103 ZFP91Q96JP5 570 aaPredicted RBP22.35■■□□□ 1.17
NDUFA3-213ENST00000484103 MTG1Q9BT17 334 aaPredicted RBP22.35■■□□□ 1.17
NDUFA3-213ENST00000484103 AMNQ9BXJ7 453 aa22.35■■□□□ 1.17
NDUFA3-213ENST00000484103 LOC102724159A0A0B4J2E5 919 aa22.34■■□□□ 1.17
NDUFA3-213ENST00000484103 DNAJB2P25686 324 aa22.34■■□□□ 1.17
NDUFA3-213ENST00000484103 PBX2P40425 430 aa22.34■■□□□ 1.17
NDUFA3-213ENST00000484103 WTAPQ15007 396 aa22.34■■□□□ 1.17
NDUFA3-213ENST00000484103 PWP2Q15269 919 aaKnown RBP22.34■■□□□ 1.17
NDUFA3-213ENST00000484103 BRDTQ58F21 947 aaPredicted RBP22.34■■□□□ 1.17
NDUFA3-213ENST00000484103 TMEM67Q5HYA8 995 aa22.34■■□□□ 1.17
NDUFA3-213ENST00000484103 OTOP2Q7RTS6 562 aa22.34■■□□□ 1.17
NDUFA3-213ENST00000484103 RGS22Q8NE09 1264 aa22.34■■□□□ 1.17
NDUFA3-213ENST00000484103 NCOA7Q8NI08 942 aa22.34■■□□□ 1.17
NDUFA3-213ENST00000484103 NSUN6Q8TEA1 469 aaKnown RBP22.34■■□□□ 1.17
NDUFA3-213ENST00000484103 PIGSQ96S52 555 aa22.34■■□□□ 1.17
NDUFA3-213ENST00000484103 NOC4LQ9BVI4 516 aaKnown RBP22.34■■□□□ 1.17
NDUFA3-213ENST00000484103 RBM8AQ9Y5S9 174 aaKnown RBP22.34■■□□□ 1.17
NDUFA3-213ENST00000484103 EYSQ5T1H1 3165 aa22.34■■□□□ 1.17
NDUFA3-213ENST00000484103 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.33■■□□□ 1.17
NDUFA3-213ENST00000484103 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.33■■□□□ 1.17
NDUFA3-213ENST00000484103 MYCLP12524 364 aaPredicted RBP22.33■■□□□ 1.17
NDUFA3-213ENST00000484103 NBPF20Q3BBV1 942 aa22.33■■□□□ 1.17
NDUFA3-213ENST00000484103 AFG1LQ8WV93 481 aa22.33■■□□□ 1.17
NDUFA3-213ENST00000484103 MYL10Q9BUA6 226 aa22.33■■□□□ 1.17
NDUFA3-213ENST00000484103 WNT8AQ9H1J5 351 aa22.33■■□□□ 1.17
NDUFA3-213ENST00000484103 IL23AQ9NPF7 189 aa22.33■■□□□ 1.17
NDUFA3-213ENST00000484103 PCDHA1Q9Y5I3 950 aa22.33■■□□□ 1.17
NDUFA3-213ENST00000484103 CDH23Q9H251 3354 aa22.32■■□□□ 1.16
NDUFA3-213ENST00000484103 DLL1O00548 723 aa22.32■■□□□ 1.16
NDUFA3-213ENST00000484103 OPLAHO14841 1288 aa22.32■■□□□ 1.16
NDUFA3-213ENST00000484103 ZBTB5O15062 677 aa22.32■■□□□ 1.16
NDUFA3-213ENST00000484103 NKRFO15226 690 aaKnown RBP eCLIP22.32■■□□□ 1.16
NDUFA3-213ENST00000484103 GRM4Q14833 912 aa22.32■■□□□ 1.16
NDUFA3-213ENST00000484103 SART3Q15020 963 aaKnown RBP22.32■■□□□ 1.16
NDUFA3-213ENST00000484103 STXBP2Q15833 593 aa22.32■■□□□ 1.16
NDUFA3-213ENST00000484103 SLC35G1Q2M3R5 365 aa22.32■■□□□ 1.16
NDUFA3-213ENST00000484103 PSRC1Q6PGN9 363 aaPredicted RBP22.32■■□□□ 1.16
NDUFA3-213ENST00000484103 PXMP2Q9NR77 195 aa22.32■■□□□ 1.16
NDUFA3-213ENST00000484103 CXXC1Q9P0U4 656 aaPredicted RBP22.32■■□□□ 1.16
NDUFA3-213ENST00000484103 PALM3A6NDB9 673 aaPredicted RBP22.31■■□□□ 1.16
NDUFA3-213ENST00000484103 RBAK-RBAKDNI3L0D1 243 aa22.31■■□□□ 1.16
NDUFA3-213ENST00000484103 ANTXR2P58335 489 aa22.31■■□□□ 1.16
NDUFA3-213ENST00000484103 DEFB128Q7Z7B8 93 aa22.31■■□□□ 1.16
NDUFA3-213ENST00000484103 FCHSD1Q86WN1 690 aa22.31■■□□□ 1.16
NDUFA3-213ENST00000484103 TIFAQ96CG3 184 aa22.31■■□□□ 1.16
NDUFA3-213ENST00000484103 ZBBXA8MT70 800 aa22.3■■□□□ 1.16
NDUFA3-213ENST00000484103 FGBP02675 491 aa22.3■■□□□ 1.16
NDUFA3-213ENST00000484103 FOSL2P15408 326 aa22.3■■□□□ 1.16
NDUFA3-213ENST00000484103 CATIPQ7Z7H3 387 aa22.3■■□□□ 1.16
NDUFA3-213ENST00000484103 NOD1Q9Y239 953 aa22.3■■□□□ 1.16
NDUFA3-213ENST00000484103 MRVI1Q9Y6F6 885 aa22.3■■□□□ 1.16
NDUFA3-213ENST00000484103 GH1P01241 217 aa22.29■■□□□ 1.16
NDUFA3-213ENST00000484103 NR3C2P08235 984 aa22.29■■□□□ 1.16
NDUFA3-213ENST00000484103 MMP3P08254 477 aa22.29■■□□□ 1.16
NDUFA3-213ENST00000484103 GRIN2CQ14957 1233 aa22.29■■□□□ 1.16
NDUFA3-213ENST00000484103 CCDC62Q6P9F0 684 aa22.29■■□□□ 1.16
NDUFA3-213ENST00000484103 RAB11FIP4Q86YS3 637 aa22.29■■□□□ 1.16
NDUFA3-213ENST00000484103 MAFAQ8NHW3 353 aaPredicted RBP22.29■■□□□ 1.16
NDUFA3-213ENST00000484103 MAP4K1Q92918 833 aa22.29■■□□□ 1.16
NDUFA3-213ENST00000484103 PBX4Q9BYU1 374 aa22.29■■□□□ 1.16
NDUFA3-213ENST00000484103 A6NJR5 290 aa22.28■■□□□ 1.16
NDUFA3-213ENST00000484103 CYTH3O43739 400 aa22.28■■□□□ 1.16
NDUFA3-213ENST00000484103 SUPT20HL2P0C7V6 817 aa22.28■■□□□ 1.16
NDUFA3-213ENST00000484103 HSD17B4P51659 736 aa22.28■■□□□ 1.16
NDUFA3-213ENST00000484103 ARHGAP1Q07960 439 aa22.28■■□□□ 1.16
NDUFA3-213ENST00000484103 NFXL1Q6ZNB6 911 aa22.28■■□□□ 1.16
NDUFA3-213ENST00000484103 MB21D2Q8IYB1 491 aaPredicted RBP22.28■■□□□ 1.16
NDUFA3-213ENST00000484103 IL31RAQ8NI17 732 aa22.28■■□□□ 1.16
NDUFA3-213ENST00000484103 IWS1Q96ST2 819 aa22.28■■□□□ 1.16
NDUFA3-213ENST00000484103 PRC1O43663 620 aa22.27■■□□□ 1.16
NDUFA3-213ENST00000484103 RXRAP19793 462 aa22.27■■□□□ 1.16
NDUFA3-213ENST00000484103 RABGGTBP53611 331 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms