RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 RAPGEF5Q92565 580 aa13.06□□□□□ -0.32
VTI1A-205ENST00000483122 MTMR8Q96EF0 704 aa13.06□□□□□ -0.32
VTI1A-205ENST00000483122 RSRC1Q96IZ7 334 aaKnown RBP13.06□□□□□ -0.32
VTI1A-205ENST00000483122 DUSP9Q99956 384 aaKnown RBP13.06□□□□□ -0.32
VTI1A-205ENST00000483122 KIF9Q9HAQ2 790 aa13.06□□□□□ -0.32
VTI1A-205ENST00000483122 NLRP2Q9NX02 1062 aa13.06□□□□□ -0.32
VTI1A-205ENST00000483122 BCCIPQ9P287 314 aaKnown RBP eCLIP13.06□□□□□ -0.32
VTI1A-205ENST00000483122 DISP2A7MBM2 1401 aa13.06□□□□□ -0.32
VTI1A-205ENST00000483122 ATRNO75882 1429 aa13.06□□□□□ -0.32
VTI1A-205ENST00000483122 MYH2Q9UKX2 1941 aa13.06□□□□□ -0.32
VTI1A-205ENST00000483122 DNAJC8O75937 253 aaPredicted RBP13.05□□□□□ -0.32
VTI1A-205ENST00000483122 HSPA9P38646 679 aaKnown RBP13.05□□□□□ -0.32
VTI1A-205ENST00000483122 RNASE9P60153 205 aaKnown RBP13.05□□□□□ -0.32
VTI1A-205ENST00000483122 MYO1EQ12965 1108 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 VPS72Q15906 364 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 CFAP221Q4G0U5 840 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 MSL1Q68DK7 614 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 HIBCHQ6NVY1 386 aaPredicted RBP13.05□□□□□ -0.32
VTI1A-205ENST00000483122 TTI2Q6NXR4 508 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 TTC5Q8N0Z6 440 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 ARMC2Q8NEN0 867 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 WHAMMQ8TF30 809 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 NSMCE1Q8WV22 266 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 SPDL1Q96EA4 605 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 GOLGA6L10A6NI86 522 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 PHF20L1A8MW92 1017 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 NBPF26B4DH59 902 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 GCOM1H8Y6P7 765 aaPredicted RBP13.05□□□□□ -0.32
VTI1A-205ENST00000483122 BMP15O95972 392 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 MYZAPP0CAP1 466 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 PDE6AP16499 860 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 HSD17B3P37058 310 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 CCDC57Q2TAC2 916 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 AKNAD1Q5T1N1 836 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 RCSD1Q6JBY9 416 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 NBPF10Q6P3W6 841 aaKnown RBP13.05□□□□□ -0.32
VTI1A-205ENST00000483122 NBPF15Q8N660 670 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 RETREG2Q8NC44 543 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 C3orf20Q8ND61 904 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 LMBR1Q8WVP7 490 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 CUL5Q93034 780 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 NAPBQ9H115 298 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 PLCB1Q9NQ66 1216 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 SCN11AQ9UI33 1791 aa13.05□□□□□ -0.32
VTI1A-205ENST00000483122 H0YGN5 161 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 EPHB6O15197 1021 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 BUB1BO60566 1050 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-205ENST00000483122 CLSTN1O94985 981 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 CDC25CP30307 473 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 PDE6BP35913 854 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 UBE3CQ15386 1083 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 UAP1Q16222 522 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-205ENST00000483122 KCTD19Q17RG1 926 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-205ENST00000483122 MIIPQ5JXC2 388 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 ZNF772Q68DY9 489 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-205ENST00000483122 MFSD6Q6ZSS7 791 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 TMC4Q7Z404 712 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 TATDN2Q93075 761 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 HOOK2Q96ED9 719 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 CNOT6LQ96LI5 555 aaKnown RBP13.04□□□□□ -0.32
VTI1A-205ENST00000483122 IQSEC3Q9UPP2 1182 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-205ENST00000483122 NFS1Q9Y697 457 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 ABCC12Q96J65 1359 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 TCRBV5S4A2TA0A5A2 114 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 PPIP5K2O43314 1243 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 RAD51CO43502 376 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 MCM7P33993 719 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 PEX19P40855 299 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 MAGEA1P43355 309 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 SF3A3Q12874 501 aaKnown RBP eCLIP13.04□□□□□ -0.32
VTI1A-205ENST00000483122 PPP1R7Q15435 360 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 CDCA2Q69YH5 1023 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-205ENST00000483122 CSGALNACT2Q8N6G5 542 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 LPIN2Q92539 896 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 TNFRSF25Q93038 417 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 RNF26Q9BY78 433 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-205ENST00000483122 ZBTB3Q9H5J0 574 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 EBF2Q9HAK2 575 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 SLC39A2Q9NP94 309 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 RBM28Q9NW13 759 aaKnown RBP13.04□□□□□ -0.32
VTI1A-205ENST00000483122 TRPC5Q9UL62 973 aaPredicted RBP13.04□□□□□ -0.32
VTI1A-205ENST00000483122 L3MBTL1Q9Y468 752 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 SPATA31A5Q5VU36 1347 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 SPATA31A7Q8IWB4 1347 aa13.04□□□□□ -0.32
VTI1A-205ENST00000483122 A0A1W2PQJ5 194 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 DCDC2CA8MYV0 355 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 KLRC4O43908 158 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 AKR1B10O60218 316 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 MTIF2P46199 727 aaKnown RBP13.03□□□□□ -0.32
VTI1A-205ENST00000483122 RASSF7Q02833 373 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 ZNF844Q08AG5 666 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 ALX1Q15699 326 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 NPY5RQ15761 445 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 CHADLQ6NUI6 762 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 LRIG3Q6UXM1 1119 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 NOC4LQ9BVI4 516 aaKnown RBP13.03□□□□□ -0.32
VTI1A-205ENST00000483122 KRT23Q9C075 422 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 KDM4CQ9H3R0 1056 aa13.03□□□□□ -0.32
VTI1A-205ENST00000483122 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.03□□□□□ -0.32
VTI1A-205ENST00000483122 PLAGL2Q9UPG8 496 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms