RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 SAPCD2Q86UD0 394 aa5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 SMARCC2Q8TAQ2 1214 aa5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 PEX11GQ96HA9 241 aa5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 SEC16BQ96JE7 1060 aa5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 NOX5Q96PH1 765 aa5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 APBA2Q99767 749 aa5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 NUDT5Q9UKK9 219 aa5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 INPP5FQ9Y2H2 1132 aa5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 EMC9Q9Y3B6 208 aa5.28□□□□□ -1.56
LAPTM4A-202ENST00000483117 TRIM26Q12899 539 aaPredicted RBP5.27□□□□□ -1.57
LAPTM4A-202ENST00000483117 RTP5Q14D33 572 aa5.27□□□□□ -1.57
LAPTM4A-202ENST00000483117 NT5DC1Q5TFE4 455 aa5.27□□□□□ -1.57
LAPTM4A-202ENST00000483117 BVESQ8NE79 360 aa5.27□□□□□ -1.57
LAPTM4A-202ENST00000483117 DPF3Q92784 378 aa5.27□□□□□ -1.57
LAPTM4A-202ENST00000483117 COPS5Q92905 334 aa5.27□□□□□ -1.57
LAPTM4A-202ENST00000483117 PPP1R14AQ96A00 147 aa5.27□□□□□ -1.57
LAPTM4A-202ENST00000483117 SYT3Q9BQG1 590 aa5.27□□□□□ -1.57
LAPTM4A-202ENST00000483117 BDH2Q9BUT1 245 aa5.27□□□□□ -1.57
LAPTM4A-202ENST00000483117 TGIF2Q9GZN2 237 aa5.27□□□□□ -1.57
LAPTM4A-202ENST00000483117 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.27□□□□□ -1.572e-10■■■■■ 29.3
LAPTM4A-202ENST00000483117 MARCH2Q9P0N8 246 aa5.27□□□□□ -1.57
LAPTM4A-202ENST00000483117 TRBV23OR9-2A0A075B6M9 112 aa5.26□□□□□ -1.57
LAPTM4A-202ENST00000483117 SH3D21A4FU49 640 aa5.26□□□□□ -1.57
LAPTM4A-202ENST00000483117 THBDP07204 575 aa5.26□□□□□ -1.57
LAPTM4A-202ENST00000483117 KRTAP10-2P60368 255 aa5.26□□□□□ -1.57
LAPTM4A-202ENST00000483117 CACNB2Q08289 660 aaPredicted RBP5.26□□□□□ -1.57
LAPTM4A-202ENST00000483117 SLC9A5Q14940 896 aa5.26□□□□□ -1.57
LAPTM4A-202ENST00000483117 INF2Q27J81 1249 aa5.26□□□□□ -1.57
LAPTM4A-202ENST00000483117 GTF2IRD2BQ6EKJ0 949 aa5.26□□□□□ -1.57
LAPTM4A-202ENST00000483117 GTF2IRD2Q86UP8 949 aa5.26□□□□□ -1.57
LAPTM4A-202ENST00000483117 FERMT3Q86UX7 667 aa5.26□□□□□ -1.57
LAPTM4A-202ENST00000483117 TRIM59Q8IWR1 403 aa5.26□□□□□ -1.57
LAPTM4A-202ENST00000483117 PLEKHO2Q8TD55 490 aa5.26□□□□□ -1.57
LAPTM4A-202ENST00000483117 DDX11Q96FC9 970 aa5.26□□□□□ -1.57
LAPTM4A-202ENST00000483117 MMP19Q99542 508 aa5.26□□□□□ -1.57
LAPTM4A-202ENST00000483117 BTG4Q9NY30 223 aa5.26□□□□□ -1.57
LAPTM4A-202ENST00000483117 NOP56O00567 594 aaKnown RBP5.25□□□□□ -1.57
LAPTM4A-202ENST00000483117 ZBTB7AO95365 584 aa5.25□□□□□ -1.57
LAPTM4A-202ENST00000483117 ATF4P18848 351 aaPredicted RBP5.25□□□□□ -1.57
LAPTM4A-202ENST00000483117 CYP4F3Q08477 520 aa5.25□□□□□ -1.57
LAPTM4A-202ENST00000483117 ERICH6BQ5W0A0 696 aa5.25□□□□□ -1.57
LAPTM4A-202ENST00000483117 POMZP3Q6PJE2 187 aa5.25□□□□□ -1.57
LAPTM4A-202ENST00000483117 TEX2Q8IWB9 1127 aa5.25□□□□□ -1.57
LAPTM4A-202ENST00000483117 CARFQ8N187 725 aa5.25□□□□□ -1.57
LAPTM4A-202ENST00000483117 CPA5Q8WXQ8 436 aa5.25□□□□□ -1.57
LAPTM4A-202ENST00000483117 MRGPRX3Q96LB0 322 aa5.25□□□□□ -1.57
LAPTM4A-202ENST00000483117 CCSER2Q9H7U1 834 aa5.25□□□□□ -1.57
LAPTM4A-202ENST00000483117 USP40Q9NVE5 1235 aa5.25□□□□□ -1.57
LAPTM4A-202ENST00000483117 SPATA6Q9NWH7 488 aaPredicted RBP5.25□□□□□ -1.57
LAPTM4A-202ENST00000483117 STRIP2Q9ULQ0 834 aa5.25□□□□□ -1.57
LAPTM4A-202ENST00000483117 MRVI1Q9Y6F6 885 aa5.25□□□□□ -1.57
LAPTM4A-202ENST00000483117 SMAD7O15105 426 aaKnown RBP5.24□□□□□ -1.57
LAPTM4A-202ENST00000483117 TBX1O43435 398 aa5.24□□□□□ -1.57
LAPTM4A-202ENST00000483117 C8BP07358 591 aa5.24□□□□□ -1.57
LAPTM4A-202ENST00000483117 NAT2P11245 290 aa5.24□□□□□ -1.57
LAPTM4A-202ENST00000483117 ZNF143P52747 638 aaPredicted RBP5.24□□□□□ -1.57
LAPTM4A-202ENST00000483117 NFKB2Q00653 900 aa5.24□□□□□ -1.57
LAPTM4A-202ENST00000483117 PLP2Q04941 152 aa5.24□□□□□ -1.57
LAPTM4A-202ENST00000483117 SMAD4Q13485 552 aaKnown RBP5.24□□□□□ -1.57
LAPTM4A-202ENST00000483117 NCAPHQ15003 741 aa5.24□□□□□ -1.57
LAPTM4A-202ENST00000483117 UBXN11Q5T124 520 aa5.24□□□□□ -1.57
LAPTM4A-202ENST00000483117 CRACR2BQ8N4Y2 399 aaPredicted RBP5.24□□□□□ -1.57
LAPTM4A-202ENST00000483117 FRS2Q8WU20 508 aa5.24□□□□□ -1.57
LAPTM4A-202ENST00000483117 BTN2A2Q8WVV5 523 aa5.24□□□□□ -1.57
LAPTM4A-202ENST00000483117 DDX1Q92499 740 aaKnown RBP5.24□□□□□ -1.57
LAPTM4A-202ENST00000483117 ZBTB8AQ96BR9 441 aa5.24□□□□□ -1.57
LAPTM4A-202ENST00000483117 CYP26B1Q9NR63 512 aa5.24□□□□□ -1.57
LAPTM4A-202ENST00000483117 DUSP10Q9Y6W6 482 aa5.24□□□□□ -1.57
LAPTM4A-202ENST00000483117 B2RBV5 119 aa5.23□□□□□ -1.57
LAPTM4A-202ENST00000483117 C22orf46C9J442 243 aa5.23□□□□□ -1.57
LAPTM4A-202ENST00000483117 ARNTLO00327 626 aa5.23□□□□□ -1.57
LAPTM4A-202ENST00000483117 SGSM2O43147 1006 aa5.23□□□□□ -1.57
LAPTM4A-202ENST00000483117 FPR2P25090 351 aa5.23□□□□□ -1.57
LAPTM4A-202ENST00000483117 SARSP49591 514 aaKnown RBP5.23□□□□□ -1.57
LAPTM4A-202ENST00000483117 ZFYVE27Q5T4F4 411 aa5.23□□□□□ -1.57
LAPTM4A-202ENST00000483117 C6orf15Q6UXA7 325 aaPredicted RBP5.23□□□□□ -1.57
LAPTM4A-202ENST00000483117 DCP2Q8IU60 420 aaKnown RBP5.23□□□□□ -1.57
LAPTM4A-202ENST00000483117 FAM26EQ8N5C1 309 aa5.23□□□□□ -1.57
LAPTM4A-202ENST00000483117 NPLOC4Q8TAT6 608 aa5.23□□□□□ -1.57
LAPTM4A-202ENST00000483117 GORASP1Q9BQQ3 440 aa5.23□□□□□ -1.57
LAPTM4A-202ENST00000483117 NKX2-4Q9H2Z4 354 aa5.23□□□□□ -1.57
LAPTM4A-202ENST00000483117 TMEFF2Q9UIK5 374 aaPredicted RBP5.23□□□□□ -1.57
LAPTM4A-202ENST00000483117 NOBOXO60393 691 aa5.22□□□□□ -1.57
LAPTM4A-202ENST00000483117 CYP2C8P10632 490 aa5.22□□□□□ -1.57
LAPTM4A-202ENST00000483117 CNR2P34972 360 aa5.22□□□□□ -1.57
LAPTM4A-202ENST00000483117 SV2CQ496J9 727 aa5.22□□□□□ -1.57
LAPTM4A-202ENST00000483117 LARP1BQ659C4 914 aaKnown RBP5.22□□□□□ -1.57
LAPTM4A-202ENST00000483117 TTLL7Q6ZT98 887 aa5.22□□□□□ -1.57
LAPTM4A-202ENST00000483117 STK32CQ86UX6 486 aa5.22□□□□□ -1.57
LAPTM4A-202ENST00000483117 CCDC103Q8IW40 242 aa5.22□□□□□ -1.57
LAPTM4A-202ENST00000483117 NTMQ9P121 344 aa5.22□□□□□ -1.57
LAPTM4A-202ENST00000483117 ITGAVP06756 1048 aa5.21□□□□□ -1.58
LAPTM4A-202ENST00000483117 ECI1P42126 302 aa5.21□□□□□ -1.58
LAPTM4A-202ENST00000483117 PRSS53Q2L4Q9 553 aa5.21□□□□□ -1.58
LAPTM4A-202ENST00000483117 CD300LDQ6UXZ3 194 aa5.21□□□□□ -1.58
LAPTM4A-202ENST00000483117 ETV3LQ6ZN32 361 aa5.21□□□□□ -1.58
LAPTM4A-202ENST00000483117 GGNQ86UU5 652 aa5.21□□□□□ -1.58
LAPTM4A-202ENST00000483117 ZNF227Q86WZ6 799 aa5.21□□□□□ -1.58
LAPTM4A-202ENST00000483117 ZNF761Q86XN6 746 aaPredicted RBP5.21□□□□□ -1.58
LAPTM4A-202ENST00000483117 FAM178BQ8IXR5 827 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms