RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 SLC26A8Q96RN1 970 aa7.89□□□□□ -1.15
CALD1-219ENST00000480638 CDC6Q99741 560 aa7.89□□□□□ -1.15
CALD1-219ENST00000480638 BTG4Q9NY30 223 aa7.89□□□□□ -1.15
CALD1-219ENST00000480638 USP35Q9P2H5 1018 aa7.89□□□□□ -1.15
CALD1-219ENST00000480638 BLACEA4D250 179 aa7.88□□□□□ -1.15
CALD1-219ENST00000480638 ABLIM1O14639 778 aa7.88□□□□□ -1.15
CALD1-219ENST00000480638 VIPR1P32241 457 aa7.88□□□□□ -1.15
CALD1-219ENST00000480638 GTF2A2P52657 109 aa7.88□□□□□ -1.15
CALD1-219ENST00000480638 TMEM62Q0P6H9 643 aa7.88□□□□□ -1.15
CALD1-219ENST00000480638 CBX2Q14781 532 aaPredicted RBP7.88□□□□□ -1.15
CALD1-219ENST00000480638 NR1I3Q14994 352 aa7.88□□□□□ -1.15
CALD1-219ENST00000480638 PLEKHN1Q494U1 663 aaPredicted RBP7.88□□□□□ -1.15
CALD1-219ENST00000480638 OLFML2BQ68BL8 750 aa7.88□□□□□ -1.15
CALD1-219ENST00000480638 NLRP10Q86W26 655 aa7.88□□□□□ -1.15
CALD1-219ENST00000480638 TEX2Q8IWB9 1127 aa7.88□□□□□ -1.15
CALD1-219ENST00000480638 Q8N1Y9 231 aa7.88□□□□□ -1.15
CALD1-219ENST00000480638 JMYQ8N9B5 988 aa7.88□□□□□ -1.15
CALD1-219ENST00000480638 PLEKHO2Q8TD55 490 aa7.88□□□□□ -1.15
CALD1-219ENST00000480638 PIF1Q9H611 641 aa7.88□□□□□ -1.15
CALD1-219ENST00000480638 TRBV23-1A0A0A0MS06 115 aa7.87□□□□□ -1.15
CALD1-219ENST00000480638 FPR2P25090 351 aa7.87□□□□□ -1.15
CALD1-219ENST00000480638 MAPKAPK2P49137 400 aa7.87□□□□□ -1.15
CALD1-219ENST00000480638 SUMO1P63165 101 aaKnown RBP7.87□□□□□ -1.15
CALD1-219ENST00000480638 C2orf27AQ580R0 203 aa7.87□□□□□ -1.15
CALD1-219ENST00000480638 FAM209AQ5JX71 171 aa7.87□□□□□ -1.15
CALD1-219ENST00000480638 WWC2Q6AWC2 1192 aa7.87□□□□□ -1.15
CALD1-219ENST00000480638 RSPO2Q6UXX9 243 aaPredicted RBP7.87□□□□□ -1.15
CALD1-219ENST00000480638 SYDE1Q6ZW31 735 aaPredicted RBP7.87□□□□□ -1.15
CALD1-219ENST00000480638 SCUBE1Q8IWY4 988 aa7.87□□□□□ -1.15
CALD1-219ENST00000480638 LILRB2Q8N423 598 aa7.87□□□□□ -1.15
CALD1-219ENST00000480638 NETO2Q8NC67 525 aa7.87□□□□□ -1.15
CALD1-219ENST00000480638 USP33Q8TEY7 942 aa7.87□□□□□ -1.15
CALD1-219ENST00000480638 THAP3Q8WTV1 239 aaPredicted RBP7.87□□□□□ -1.15
CALD1-219ENST00000480638 DCAF4Q8WV16 495 aa7.87□□□□□ -1.15
CALD1-219ENST00000480638 PHF20Q9BVI0 1012 aa7.87□□□□□ -1.15
CALD1-219ENST00000480638 GPR27Q9NS67 375 aa7.87□□□□□ -1.15
CALD1-219ENST00000480638 PCDHA2Q9Y5H9 948 aa7.87□□□□□ -1.15
CALD1-219ENST00000480638 TEX51A0A1B0GUA7 166 aa7.86□□□□□ -1.15
CALD1-219ENST00000480638 C22orf46C9J442 243 aa7.86□□□□□ -1.15
CALD1-219ENST00000480638 MSCO60682 206 aa7.86□□□□□ -1.15
CALD1-219ENST00000480638 SEMA7AO75326 666 aa7.86□□□□□ -1.15
CALD1-219ENST00000480638 BCL6P41182 706 aa7.86□□□□□ -1.15
CALD1-219ENST00000480638 SRSF3P84103 164 aaKnown RBP7.86□□□□□ -1.15
CALD1-219ENST00000480638 STYK1Q6J9G0 422 aa7.86□□□□□ -1.15
CALD1-219ENST00000480638 ZC3H14Q6PJT7 736 aaKnown RBP7.86□□□□□ -1.15
CALD1-219ENST00000480638 TMC6Q7Z403 805 aa7.86□□□□□ -1.15
CALD1-219ENST00000480638 SLC38A3Q99624 504 aa7.86□□□□□ -1.15
CALD1-219ENST00000480638 RXFP1Q9HBX9 757 aa7.86□□□□□ -1.15
CALD1-219ENST00000480638 ZC3H12DA2A288 527 aaKnown RBP7.85□□□□□ -1.15
CALD1-219ENST00000480638 NTRK1P04629 796 aa7.85□□□□□ -1.15
CALD1-219ENST00000480638 ZC3H12BQ5HYM0 836 aaKnown RBP7.85□□□□□ -1.15
CALD1-219ENST00000480638 KCNT2Q6UVM3 1135 aa7.85□□□□□ -1.15
CALD1-219ENST00000480638 CEP68Q76N32 757 aa7.85□□□□□ -1.15
CALD1-219ENST00000480638 KISS1RQ969F8 398 aaPredicted RBP7.85□□□□□ -1.15
CALD1-219ENST00000480638 IPO9Q96P70 1041 aaKnown RBP7.85□□□□□ -1.15
CALD1-219ENST00000480638 PPP1R16BQ96T49 567 aa7.85□□□□□ -1.15
CALD1-219ENST00000480638 DHRS4Q9BTZ2 278 aa7.85□□□□□ -1.15
CALD1-219ENST00000480638 MBD1Q9UIS9 605 aaPredicted RBP7.85□□□□□ -1.15
CALD1-219ENST00000480638 MRPS23Q9Y3D9 190 aaKnown RBP7.85□□□□□ -1.15
CALD1-219ENST00000480638 HCFC2Q9Y5Z7 792 aa7.85□□□□□ -1.15
CALD1-219ENST00000480638 PTCH2Q9Y6C5 1203 aa7.85□□□□□ -1.15
CALD1-219ENST00000480638 X6R8D5 127 aa7.85□□□□□ -1.15
CALD1-219ENST00000480638 F8W031 263 aaPredicted RBP7.84□□□□□ -1.15
CALD1-219ENST00000480638 C6orf222P0C671 652 aaPredicted RBP7.84□□□□□ -1.15
CALD1-219ENST00000480638 LSAMPQ13449 338 aa7.84□□□□□ -1.15
CALD1-219ENST00000480638 RIOX2Q8IUF8 465 aa7.84□□□□□ -1.15
CALD1-219ENST00000480638 ZSWIM2Q8NEG5 633 aa7.84□□□□□ -1.15
CALD1-219ENST00000480638 BHLHE22Q8NFJ8 381 aaPredicted RBP7.84□□□□□ -1.15
CALD1-219ENST00000480638 TRMT2BQ96GJ1 504 aaKnown RBP7.84□□□□□ -1.15
CALD1-219ENST00000480638 TMEM169Q96HH4 297 aa7.84□□□□□ -1.15
CALD1-219ENST00000480638 CHAMP1Q96JM3 812 aa7.84□□□□□ -1.15
CALD1-219ENST00000480638 ZFYVE21Q9BQ24 234 aa7.84□□□□□ -1.15
CALD1-219ENST00000480638 GCM1Q9NP62 436 aa7.84□□□□□ -1.15
CALD1-219ENST00000480638 SIRT5Q9NXA8 310 aa7.84□□□□□ -1.15
CALD1-219ENST00000480638 NUDT5Q9UKK9 219 aa7.84□□□□□ -1.15
CALD1-219ENST00000480638 H7BY64 318 aa7.83□□□□□ -1.16
CALD1-219ENST00000480638 ETV2O00321 342 aaPredicted RBP7.83□□□□□ -1.16
CALD1-219ENST00000480638 TSPAN15O95858 294 aa7.83□□□□□ -1.16
CALD1-219ENST00000480638 KRT1P04264 644 aa7.83□□□□□ -1.16
CALD1-219ENST00000480638 C8AP07357 584 aa7.83□□□□□ -1.16
CALD1-219ENST00000480638 MED14OSP0DP75 135 aa7.83□□□□□ -1.16
CALD1-219ENST00000480638 GLDCP23378 1020 aa7.83□□□□□ -1.16
CALD1-219ENST00000480638 GPR85P60893 370 aa7.83□□□□□ -1.16
CALD1-219ENST00000480638 MROH9Q5TGP6 573 aa7.83□□□□□ -1.16
CALD1-219ENST00000480638 TMEM132EQ6IEE7 984 aa7.83□□□□□ -1.16
CALD1-219ENST00000480638 DCP2Q8IU60 420 aaKnown RBP7.83□□□□□ -1.16
CALD1-219ENST00000480638 SGPP1Q9BX95 441 aa7.83□□□□□ -1.16
CALD1-219ENST00000480638 CNTD2Q9H8S5 307 aa7.83□□□□□ -1.16
CALD1-219ENST00000480638 CLDND1Q9NY35 253 aa7.83□□□□□ -1.16
CALD1-219ENST00000480638 DBR1Q9UK59 544 aaKnown RBP7.83□□□□□ -1.16
CALD1-219ENST00000480638 ASXL2Q76L83 1435 aa7.83□□□□□ -1.16
CALD1-219ENST00000480638 PRR5P85299 388 aa7.82□□□□□ -1.16
CALD1-219ENST00000480638 ZNF200P98182 395 aaPredicted RBP7.82□□□□□ -1.16
CALD1-219ENST00000480638 LBX2Q6XYB7 198 aa7.82□□□□□ -1.16
CALD1-219ENST00000480638 MAMDC2Q7Z304 686 aaPredicted RBP7.82□□□□□ -1.16
CALD1-219ENST00000480638 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.82□□□□□ -1.16
CALD1-219ENST00000480638 KCNN1Q92952 543 aa7.82□□□□□ -1.16
CALD1-219ENST00000480638 TSPAN17Q96FV3 270 aa7.82□□□□□ -1.16
CALD1-219ENST00000480638 PEX11GQ96HA9 241 aa7.82□□□□□ -1.16
CALD1-219ENST00000480638 CDIP1Q9H305 208 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms