RNA–Protein interactions for RNA: ENST00000480602.1

PUM1-209, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 5

Gene PUM1, Length 906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-209ENST00000480602 FAM133AQ8N9E0 248 aa9.02□□□□□ -0.97
PUM1-209ENST00000480602 RIN2Q8WYP3 895 aaPredicted RBP9.02□□□□□ -0.97
PUM1-209ENST00000480602 DHX38Q92620 1227 aaKnown RBP9.02□□□□□ -0.97
PUM1-209ENST00000480602 CTAGE1Q96RT6 745 aa9.02□□□□□ -0.97
PUM1-209ENST00000480602 EHD4Q9H223 541 aa9.02□□□□□ -0.97
PUM1-209ENST00000480602 POLR3EQ9NVU0 708 aa9.02□□□□□ -0.97
PUM1-209ENST00000480602 NOD1Q9Y239 953 aa9.02□□□□□ -0.97
PUM1-209ENST00000480602 Q9Y3F1 56 aa9.02□□□□□ -0.97
PUM1-209ENST00000480602 ITPR1Q14643 2758 aa9.01□□□□□ -0.97
PUM1-209ENST00000480602 WDR46O15213 610 aaKnown RBP9.01□□□□□ -0.97
PUM1-209ENST00000480602 LGR5O75473 907 aa9.01□□□□□ -0.97
PUM1-209ENST00000480602 PARNO95453 639 aaKnown RBP9.01□□□□□ -0.97
PUM1-209ENST00000480602 MMP1P03956 469 aa9.01□□□□□ -0.97
PUM1-209ENST00000480602 MYL3P08590 195 aa9.01□□□□□ -0.97
PUM1-209ENST00000480602 LINC00271P0C7V0 271 aa9.01□□□□□ -0.97
PUM1-209ENST00000480602 PMLP29590 882 aa9.01□□□□□ -0.97
PUM1-209ENST00000480602 PPP4CP60510 307 aa9.01□□□□□ -0.97
PUM1-209ENST00000480602 CAMK1Q14012 370 aa9.01□□□□□ -0.97
PUM1-209ENST00000480602 ERICH6BQ5W0A0 696 aa9.01□□□□□ -0.97
PUM1-209ENST00000480602 SNRNP48Q6IEG0 339 aaKnown RBP9.01□□□□□ -0.97
PUM1-209ENST00000480602 ADGRA1Q86SQ6 560 aa9.01□□□□□ -0.97
PUM1-209ENST00000480602 GPR161Q8N6U8 529 aaKnown RBP9.01□□□□□ -0.97
PUM1-209ENST00000480602 MTG1Q9BT17 334 aaPredicted RBP9.01□□□□□ -0.97
PUM1-209ENST00000480602 TEX13BQ9BXU2 312 aa9.01□□□□□ -0.97
PUM1-209ENST00000480602 SRCIN1Q9C0H9 1055 aa9.01□□□□□ -0.97
PUM1-209ENST00000480602 PDGFCQ9NRA1 345 aa9.01□□□□□ -0.97
PUM1-209ENST00000480602 HMG20BQ9P0W2 317 aa9.01□□□□□ -0.97
PUM1-209ENST00000480602 CEP126Q9P2H0 1117 aa9.01□□□□□ -0.97
PUM1-209ENST00000480602 NCDNQ9UBB6 729 aa9.01□□□□□ -0.97
PUM1-209ENST00000480602 PPP1R9AQ9ULJ8 1098 aa9.01□□□□□ -0.97
PUM1-209ENST00000480602 DDX49Q9Y6V7 483 aaKnown RBP9.01□□□□□ -0.97
PUM1-209ENST00000480602 RB1P06400 928 aa9□□□□□ -0.97
PUM1-209ENST00000480602 SHC2P98077 582 aa9□□□□□ -0.97
PUM1-209ENST00000480602 PTPN11Q06124 597 aaPredicted RBP9□□□□□ -0.97
PUM1-209ENST00000480602 PTGISQ16647 500 aa9□□□□□ -0.97
PUM1-209ENST00000480602 CCDC27Q2M243 656 aa9□□□□□ -0.97
PUM1-209ENST00000480602 SLC4A10Q6U841 1118 aa9□□□□□ -0.97
PUM1-209ENST00000480602 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9□□□□□ -0.97
PUM1-209ENST00000480602 CLEC10AQ8IUN9 316 aa9□□□□□ -0.97
PUM1-209ENST00000480602 RTP3Q9BQQ7 232 aa9□□□□□ -0.97
PUM1-209ENST00000480602 VCPKMTQ9H867 229 aa9□□□□□ -0.97
PUM1-209ENST00000480602 WDFY3Q8IZQ1 3526 aa9□□□□□ -0.97
PUM1-209ENST00000480602 TAF4O00268 1085 aa8.99□□□□□ -0.97
PUM1-209ENST00000480602 MPHOSPH10O00566 681 aaKnown RBP8.99□□□□□ -0.97
PUM1-209ENST00000480602 CKBP12277 381 aa8.99□□□□□ -0.97
PUM1-209ENST00000480602 BMPR1AP36894 532 aa8.99□□□□□ -0.97
PUM1-209ENST00000480602 NRIP1P48552 1158 aa8.99□□□□□ -0.97
PUM1-209ENST00000480602 RBM10P98175 930 aaKnown RBP8.99□□□□□ -0.97
PUM1-209ENST00000480602 CNTN2Q02246 1040 aa8.99□□□□□ -0.97
PUM1-209ENST00000480602 RING1Q06587 406 aa8.99□□□□□ -0.97
PUM1-209ENST00000480602 RBL2Q08999 1139 aa8.99□□□□□ -0.97
PUM1-209ENST00000480602 MBTPS1Q14703 1052 aa8.99□□□□□ -0.97
PUM1-209ENST00000480602 VARS2Q5ST30 1063 aaKnown RBP8.99□□□□□ -0.97
PUM1-209ENST00000480602 IQSEC1Q6DN90 963 aa8.99□□□□□ -0.97
PUM1-209ENST00000480602 TAPT1Q6NXT6 567 aa8.99□□□□□ -0.97
PUM1-209ENST00000480602 TRAF7Q6Q0C0 670 aa8.99□□□□□ -0.97
PUM1-209ENST00000480602 SIAH1Q8IUQ4 282 aa8.99□□□□□ -0.97
PUM1-209ENST00000480602 FBXO16Q8IX29 292 aaPredicted RBP8.99□□□□□ -0.97
PUM1-209ENST00000480602 ANKRD35Q8N283 1001 aa8.99□□□□□ -0.97
PUM1-209ENST00000480602 PPP2R3CQ969Q6 453 aa8.99□□□□□ -0.97
PUM1-209ENST00000480602 YTHDC1Q96MU7 727 aaKnown RBP8.99□□□□□ -0.97
PUM1-209ENST00000480602 LHX6Q9UPM6 363 aa8.99□□□□□ -0.97
PUM1-209ENST00000480602 IGSF10Q6WRI0 2623 aa8.98□□□□□ -0.97
PUM1-209ENST00000480602 E9PSI1 815 aa8.98□□□□□ -0.97
PUM1-209ENST00000480602 CIAO1O76071 339 aa8.98□□□□□ -0.97
PUM1-209ENST00000480602 UPP2O95045 317 aa8.98□□□□□ -0.97
PUM1-209ENST00000480602 ASGR2P07307 311 aa8.98□□□□□ -0.97
PUM1-209ENST00000480602 SP9P0CG40 484 aa8.98□□□□□ -0.97
PUM1-209ENST00000480602 DNAJB1P25685 340 aa8.98□□□□□ -0.97
PUM1-209ENST00000480602 NAA16Q6N069 864 aaPredicted RBP8.98□□□□□ -0.97
PUM1-209ENST00000480602 SPATA5Q8NB90 893 aa8.98□□□□□ -0.97
PUM1-209ENST00000480602 VN1R2Q8NFZ6 395 aa8.98□□□□□ -0.97
PUM1-209ENST00000480602 TOP1MTQ969P6 601 aa8.98□□□□□ -0.97
PUM1-209ENST00000480602 GPHNQ9NQX3 736 aaPredicted RBP8.98□□□□□ -0.97
PUM1-209ENST00000480602 TMX2Q9Y320 296 aa8.98□□□□□ -0.97
PUM1-209ENST00000480602 COL4A3Q01955 1670 aa8.97□□□□□ -0.97
PUM1-209ENST00000480602 DMXL2Q8TDJ6 3036 aa8.97□□□□□ -0.97
PUM1-209ENST00000480602 C1QTNF9BB2RNN3 333 aa8.97□□□□□ -0.97
PUM1-209ENST00000480602 C2CD4DB7Z1M9 353 aa8.97□□□□□ -0.97
PUM1-209ENST00000480602 SLC30A4O14863 429 aa8.97□□□□□ -0.97
PUM1-209ENST00000480602 C1QTNF9P0C862 333 aa8.97□□□□□ -0.97
PUM1-209ENST00000480602 TGM1P22735 817 aa8.97□□□□□ -0.97
PUM1-209ENST00000480602 SLC4A3P48751 1232 aa8.97□□□□□ -0.97
PUM1-209ENST00000480602 CPT1AP50416 773 aa8.97□□□□□ -0.97
PUM1-209ENST00000480602 TIMM10P62072 90 aa8.97□□□□□ -0.97
PUM1-209ENST00000480602 GDF6Q6KF10 455 aaPredicted RBP8.97□□□□□ -0.97
PUM1-209ENST00000480602 EEPD1Q7L9B9 569 aa8.97□□□□□ -0.97
PUM1-209ENST00000480602 RBM23Q86U06 439 aaKnown RBP8.97□□□□□ -0.97
PUM1-209ENST00000480602 FIBCD1Q8N539 461 aa8.97□□□□□ -0.97
PUM1-209ENST00000480602 LRP2BPQ9P2M1 347 aa8.97□□□□□ -0.97
PUM1-209ENST00000480602 USP18Q9UMW8 372 aa8.97□□□□□ -0.97
PUM1-209ENST00000480602 NR2E1Q9Y466 385 aa8.97□□□□□ -0.97
PUM1-209ENST00000480602 USP9XQ93008 2570 aaPredicted RBP8.97□□□□□ -0.97
PUM1-209ENST00000480602 NAV1Q8NEY1 1877 aa8.96□□□□□ -0.97
PUM1-209ENST00000480602 ASB14A6NK59 587 aa8.96□□□□□ -0.98
PUM1-209ENST00000480602 APAF1O14727 1248 aa8.96□□□□□ -0.98
PUM1-209ENST00000480602 KINO60870 393 aaKnown RBP8.96□□□□□ -0.98
PUM1-209ENST00000480602 KCNA4P22459 653 aa8.96□□□□□ -0.98
PUM1-209ENST00000480602 PLCD1P51178 756 aa8.96□□□□□ -0.98
PUM1-209ENST00000480602 DYNLL1P63167 89 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms