RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 MTMR3Q13615 1198 aa11.76□□□□□ -0.53
SIK3-210ENST00000480468 ZNF268Q14587 947 aaPredicted RBP11.76□□□□□ -0.53
SIK3-210ENST00000480468 ITIH4Q14624 930 aa11.76□□□□□ -0.53
SIK3-210ENST00000480468 PPP1R7Q15435 360 aa11.76□□□□□ -0.53
SIK3-210ENST00000480468 KIRREL3Q8IZU9 778 aa11.76□□□□□ -0.53
SIK3-210ENST00000480468 CCDC63Q8NA47 563 aa11.76□□□□□ -0.53
SIK3-210ENST00000480468 CNKSR1Q969H4 720 aa11.76□□□□□ -0.53
SIK3-210ENST00000480468 ZNF512BQ96KM6 892 aaPredicted RBP11.76□□□□□ -0.53
SIK3-210ENST00000480468 ANKRD27Q96NW4 1050 aa11.76□□□□□ -0.53
SIK3-210ENST00000480468 SLC52A2Q9HAB3 445 aa11.76□□□□□ -0.53
SIK3-210ENST00000480468 CWC25Q9NXE8 425 aaPredicted RBP11.76□□□□□ -0.53
SIK3-210ENST00000480468 ARHGAP20Q9P2F6 1191 aa11.76□□□□□ -0.53
SIK3-210ENST00000480468 SCN11AQ9UI33 1791 aa11.76□□□□□ -0.53
SIK3-210ENST00000480468 KIF1AQ12756 1690 aa11.76□□□□□ -0.53
SIK3-210ENST00000480468 MYH6P13533 1939 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 ESYT3A0FGR9 886 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 EME2A4GXA9 379 aaPredicted RBP11.75□□□□□ -0.53
SIK3-210ENST00000480468 FAM205CA6NFA0 338 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 ZSCAN5CA6NGD5 496 aaPredicted RBP11.75□□□□□ -0.53
SIK3-210ENST00000480468 BHMG1C9JSJ3 638 aaPredicted RBP11.75□□□□□ -0.53
SIK3-210ENST00000480468 CES2O00748 559 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 SKAP2O75563 359 aaPredicted RBP11.75□□□□□ -0.53
SIK3-210ENST00000480468 PECAM1P16284 738 aaPredicted RBP11.75□□□□□ -0.53
SIK3-210ENST00000480468 TRAPPC10P48553 1259 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 TRAF1Q13077 416 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 TTC38Q5R3I4 469 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 CPLX4Q7Z7G2 160 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 ANKS4BQ8N8V4 417 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 FANCBQ8NB91 859 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 CCDC197Q8NCU1 140 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 TNFRSF25Q93038 417 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 F8W031 263 aaPredicted RBP11.75□□□□□ -0.53
SIK3-210ENST00000480468 ASAP2O43150 1006 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 NCK2O43639 380 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 FESP07332 822 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 MAGEA1P43355 309 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 PMS1P54277 932 aaKnown RBP11.75□□□□□ -0.53
SIK3-210ENST00000480468 PTGDRQ13258 359 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 WTAPQ15007 396 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 GIMAP8Q8ND71 665 aaPredicted RBP11.75□□□□□ -0.53
SIK3-210ENST00000480468 TBC1D31Q96DN5 1066 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 CHMP6Q96FZ7 201 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 INPP4AQ96PE3 977 aaPredicted RBP11.75□□□□□ -0.53
SIK3-210ENST00000480468 KCNMB3Q9NPA1 279 aa11.75□□□□□ -0.53
SIK3-210ENST00000480468 AKAP11Q9UKA4 1901 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 BICDL2A1A5D9 508 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 IRF6O14896 467 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 AHCYL1O43865 530 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 AKR1B10O60218 316 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 RHOBTB3O94955 611 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 LUC7L3O95232 432 aaKnown RBP11.74□□□□□ -0.53
SIK3-210ENST00000480468 ECHS1P30084 290 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 EIF4A3P38919 411 aaKnown RBP11.74□□□□□ -0.53
SIK3-210ENST00000480468 SLC39A6Q13433 755 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 BLMHQ13867 455 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 UAP1Q16222 522 aaPredicted RBP11.74□□□□□ -0.53
SIK3-210ENST00000480468 EARS2Q5JPH6 523 aaKnown RBP11.74□□□□□ -0.53
SIK3-210ENST00000480468 FKBP15Q5T1M5 1219 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 AKNAD1Q5T1N1 836 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 ERMARDQ5T6L9 678 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 ARL6IP4Q66PJ3 421 aaKnown RBP11.74□□□□□ -0.53
SIK3-210ENST00000480468 TYW1BQ6NUM6 668 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 ARHGAP27Q6ZUM4 889 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 CACNA2D4Q7Z3S7 1137 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 ANKLE2Q86XL3 938 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 SHISA4Q96DD7 197 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 THOC1Q96FV9 657 aaKnown RBP11.74□□□□□ -0.53
SIK3-210ENST00000480468 ZNF496Q96IT1 587 aaPredicted RBP11.74□□□□□ -0.53
SIK3-210ENST00000480468 ZNF594Q96JF6 807 aaPredicted RBP11.74□□□□□ -0.53
SIK3-210ENST00000480468 PSMB7Q99436 277 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 KRT12Q99456 494 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 DUSP9Q99956 384 aaKnown RBP11.74□□□□□ -0.53
SIK3-210ENST00000480468 PUS3Q9BZE2 481 aaKnown RBP11.74□□□□□ -0.53
SIK3-210ENST00000480468 TMEM59LQ9UK28 342 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 COL22A1Q8NFW1 1626 aaPredicted RBP11.74□□□□□ -0.53
SIK3-210ENST00000480468 A0A0G2JS52 829 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 RBAK-RBAKDNI3L0D1 243 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 PLEKP08567 350 aaPredicted RBP11.74□□□□□ -0.53
SIK3-210ENST00000480468 TMOD1P28289 359 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 CTNNA1P35221 906 aaKnown RBP11.74□□□□□ -0.53
SIK3-210ENST00000480468 LONP1P36776 959 aaKnown RBP11.74□□□□□ -0.53
SIK3-210ENST00000480468 PPP1R2P41236 205 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 KLK7P49862 253 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 CCNG1P51959 295 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 MIIPQ5JXC2 388 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 CSGALNACT2Q8N6G5 542 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 ITFG2Q969R8 447 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 MTMR8Q96EF0 704 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 MS4A14Q96JA4 679 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 FAM210AQ96ND0 272 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 ZNF570Q96NI8 536 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 STRBPQ96SI9 672 aaKnown RBP11.74□□□□□ -0.53
SIK3-210ENST00000480468 UBAC1Q9BSL1 405 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 FAM129AQ9BZQ8 928 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 SLC5A4Q9NY91 659 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 CPSF2Q9P2I0 782 aaKnown RBP11.74□□□□□ -0.53
SIK3-210ENST00000480468 CNOT8Q9UFF9 292 aaKnown RBP11.74□□□□□ -0.53
SIK3-210ENST00000480468 MAPK8IP1Q9UQF2 711 aa11.74□□□□□ -0.53
SIK3-210ENST00000480468 SETD1BQ9UPS6 1966 aaKnown RBP11.73□□□□□ -0.53
SIK3-210ENST00000480468 SSU72P8A0A1W2PR75 194 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms