RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 C12orf42Q96LP6 360 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 CCDC17Q96LX7 622 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 PNMA5Q96PV4 448 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 CRBNQ96SW2 442 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 SAP130Q9H0E3 1048 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 DCP1AQ9NPI6 582 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-213ENST00000480102 C11orf16Q9NQ32 467 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 AATFQ9NY61 560 aaKnown RBP eCLIP5.88□□□□□ -1.47
PTCD3-213ENST00000480102 SWAP70Q9UH65 585 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 AFG3L2Q9Y4W6 797 aa5.88□□□□□ -1.47
PTCD3-213ENST00000480102 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.88□□□□□ -1.47
PTCD3-213ENST00000480102 HIP1O00291 1037 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 GOLIM4O00461 696 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 TLR2O60603 784 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 PCP11498 1178 aaKnown RBP5.87□□□□□ -1.47
PTCD3-213ENST00000480102 PTPRAP18433 802 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 NFKB1P19838 968 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 COL8A1P27658 744 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 PDE1AP54750 535 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 PABPC4Q13310 644 aaKnown RBP eCLIP5.87□□□□□ -1.47
PTCD3-213ENST00000480102 MOGSQ13724 837 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 PRAMEF18Q5VWM3 479 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 DLK2Q6UY11 383 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 LBX2Q6XYB7 198 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 ALYREFQ86V81 257 aaKnown RBP5.87□□□□□ -1.47
PTCD3-213ENST00000480102 CHD1LQ86WJ1 897 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 ZFPM1Q8IX07 1006 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 SH3RF3Q8TEJ3 882 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-213ENST00000480102 BRI3BPQ8WY22 251 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 CLMNQ96JQ2 1002 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 ANTXR1Q9H6X2 564 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 AS3MTQ9HBK9 375 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 ZNF287Q9HBT7 754 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 PICK1Q9NRD5 415 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 HELLSQ9NRZ9 838 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 ARPP21Q9UBL0 812 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-213ENST00000480102 ZNF532Q9HCE3 1301 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 ROBO3Q96MS0 1386 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 SPEF2Q9C093 1822 aa5.87□□□□□ -1.47
PTCD3-213ENST00000480102 MYPNQ86TC9 1320 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 ADGRA2Q96PE1 1338 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 TNFRSF10BO14763 440 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 OPLAHO14841 1288 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 RNF113AO15541 343 aaKnown RBP5.86□□□□□ -1.47
PTCD3-213ENST00000480102 FGRP09769 529 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 BRD2P25440 801 aaKnown RBP5.86□□□□□ -1.47
PTCD3-213ENST00000480102 GCLCP48506 637 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-213ENST00000480102 CACNB3P54284 484 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 USP14P54578 494 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 BACE1P56817 501 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 ALX1Q15699 326 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 ZMYM1Q5SVZ6 1142 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 C12orf60Q5U649 245 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 C17orf99Q6UX52 265 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 MOB2Q70IA6 237 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 CTU1Q7Z7A3 348 aaKnown RBP5.86□□□□□ -1.47
PTCD3-213ENST00000480102 ETFBKMTQ8IXQ9 262 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 AMOTL1Q8IY63 956 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 LPAR1Q92633 364 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 STRBPQ96SI9 672 aaKnown RBP5.86□□□□□ -1.47
PTCD3-213ENST00000480102 PARK7Q99497 189 aaKnown RBP5.86□□□□□ -1.47
PTCD3-213ENST00000480102 PTPN18Q99952 460 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 UBE2OQ9C0C9 1292 aaKnown RBP5.86□□□□□ -1.47
PTCD3-213ENST00000480102 KIAA1683Q9H0B3 1180 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 BOLA2Q9H3K6 86 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 SUV39H2Q9H5I1 410 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 ZFYVE28Q9HCC9 887 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 NOP53Q9NZM5 478 aaKnown RBP5.86□□□□□ -1.47
PTCD3-213ENST00000480102 ANAPC4Q9UJX5 808 aa5.86□□□□□ -1.47
PTCD3-213ENST00000480102 CCL15-CCL14A0A0B4J2E2 113 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 IGF2BP3O00425 579 aaKnown RBP eCLIP5.85□□□□□ -1.47
PTCD3-213ENST00000480102 FKTNO75072 461 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 ALBP02768 609 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 NOVP48745 357 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 LBX1P52954 281 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 MFAP1P55081 439 aaKnown RBP5.85□□□□□ -1.47
PTCD3-213ENST00000480102 TCP10Q12799 353 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 NAA30Q147X3 362 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-213ENST00000480102 CCL15Q16663 113 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 FAM110CQ1W6H9 321 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 PLA2G4EQ3MJ16 856 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 FAM26DQ5JW98 314 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 ANKRD45Q5TZF3 282 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 GPAT2Q6NUI2 795 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 TMEM179Q6ZVK1 233 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 C16orf86Q6ZW13 317 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 MIGA2Q7L4E1 593 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 ZSCAN29Q8IWY8 852 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-213ENST00000480102 RGL4Q8IZJ4 473 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 TGFBRAP1Q8WUH2 860 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 ZKSCAN4Q969J2 545 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-213ENST00000480102 TRIM11Q96F44 468 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 ERO1AQ96HE7 468 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 DNAJC2Q99543 621 aaKnown RBP5.85□□□□□ -1.47
PTCD3-213ENST00000480102 NACAP1Q9BZK3 213 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 SH2D4AQ9H788 454 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 DNAJC18Q9H819 358 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 ELP3Q9H9T3 547 aa5.85□□□□□ -1.47
PTCD3-213ENST00000480102 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.85□□□□□ -1.47
PTCD3-213ENST00000480102 ZBTB21Q9ULJ3 1066 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms