RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	PAGR1	Q9BTK6	254 aa		12.72	□□□□□ -0.37
APTX-223	ENST00000479656	NUP62CL	Q9H1M0	184 aa		12.72	□□□□□ -0.37
APTX-223	ENST00000479656	FAM13B	Q9NYF5	915 aa		12.72	□□□□□ -0.37
APTX-223	ENST00000479656	CYP3A7-CYP3A51P	A0A087WV96	503 aa		12.71	□□□□□ -0.37
APTX-223	ENST00000479656	FAM237A	A0A1B0GTK4	181 aa		12.71	□□□□□ -0.37
APTX-223	ENST00000479656	GCFC2	P16383	781 aa	Known RBP	12.71	□□□□□ -0.37
APTX-223	ENST00000479656	CYP3A7	P24462	503 aa		12.71	□□□□□ -0.37
APTX-223	ENST00000479656	PRPH	P41219	470 aa		12.71	□□□□□ -0.37
APTX-223	ENST00000479656	TXK	P42681	527 aa		12.71	□□□□□ -0.37
APTX-223	ENST00000479656	SYK	P43405	635 aa		12.71	□□□□□ -0.37
APTX-223	ENST00000479656	GHRHR	Q02643	423 aa		12.71	□□□□□ -0.37
APTX-223	ENST00000479656	BAAT	Q14032	418 aa	Predicted RBP	12.71	□□□□□ -0.37
APTX-223	ENST00000479656	GSE1	Q14687	1217 aa		12.71	□□□□□ -0.37
APTX-223	ENST00000479656	SLC30A10	Q6XR72	485 aa		12.71	□□□□□ -0.37
APTX-223	ENST00000479656	SAMD3	Q8N6K7	520 aa		12.71	□□□□□ -0.37
APTX-223	ENST00000479656	MB21D1	Q8N884	522 aa		12.71	□□□□□ -0.37
APTX-223	ENST00000479656	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.71	□□□□□ -0.37
APTX-223	ENST00000479656	BRI3BP	Q8WY22	251 aa		12.71	□□□□□ -0.37
APTX-223	ENST00000479656	TAAR1	Q96RJ0	339 aa		12.71	□□□□□ -0.37
APTX-223	ENST00000479656	UIMC1	Q96RL1	719 aa		12.71	□□□□□ -0.37
APTX-223	ENST00000479656	NAP1L4	Q99733	375 aa	Known RBP	12.71	□□□□□ -0.37
APTX-223	ENST00000479656	CLSTN2	Q9H4D0	955 aa		12.71	□□□□□ -0.37
APTX-223	ENST00000479656	MAP3K20	Q9NYL2	800 aa	Known RBP	12.71	□□□□□ -0.37
APTX-223	ENST00000479656	KCNH3	Q9ULD8	1083 aa		12.71	□□□□□ -0.37
APTX-223	ENST00000479656	PASK	Q96RG2	1323 aa		12.71	□□□□□ -0.38
APTX-223	ENST00000479656	MYH7B	A7E2Y1	1941 aa		12.71	□□□□□ -0.38
APTX-223	ENST00000479656	BTBD19	C9JJ37	291 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	KIN	O60870	393 aa	Known RBP	12.7	□□□□□ -0.38
APTX-223	ENST00000479656	CNMD	O75829	334 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	CYP3A4	P08684	503 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	ZBTB48	P10074	688 aa	Predicted RBP	12.7	□□□□□ -0.38
APTX-223	ENST00000479656	CDC25A	P30304	524 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	ZNF76	P36508	570 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	LONP1	P36776	959 aa	Known RBP	12.7	□□□□□ -0.38
APTX-223	ENST00000479656	TEC	P42680	631 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	ZNF157	P51786	506 aa	Predicted RBP	12.7	□□□□□ -0.38
APTX-223	ENST00000479656	TKFC	Q3LXA3	575 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	SAPCD2	Q86UD0	394 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	SYMPK	Q92797	1274 aa	Known RBP	12.7	□□□□□ -0.38
APTX-223	ENST00000479656	ZFP91	Q96JP5	570 aa	Predicted RBP	12.7	□□□□□ -0.38
APTX-223	ENST00000479656	MBOAT7	Q96N66	472 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	PURB	Q96QR8	312 aa	Known RBP	12.7	□□□□□ -0.38
APTX-223	ENST00000479656	TNMD	Q9H2S6	317 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	RBPJL	Q9UBG7	517 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	FAM86B1	E9PN63	330 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	PDHX	O00330	501 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	POLR2D	O15514	142 aa	Known RBP	12.7	□□□□□ -0.38
APTX-223	ENST00000479656	MARCH6	O60337	910 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	LETM1	O95202	739 aa	Predicted RBP	12.7	□□□□□ -0.38
APTX-223	ENST00000479656	FAM86B2	P0C5J1	330 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	CYP2C8	P10632	490 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	CIITA	P33076	1130 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	ZNF445	P59923	1031 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656		Q3C1V9	767 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	PRR16	Q569H4	304 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	MOXD1	Q6UVY6	613 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	RIOX2	Q8IUF8	465 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	PDILT	Q8N807	584 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	CYP2W1	Q8TAV3	490 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	HAS1	Q92839	578 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	GJA10	Q969M2	543 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	SPATC1L	Q9H0A9	340 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	ACAD9	Q9H845	621 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	EHMT1	Q9H9B1	1298 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	TXNRD2	Q9NNW7	524 aa		12.7	□□□□□ -0.38
APTX-223	ENST00000479656	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.69	□□□□□ -0.38
APTX-223	ENST00000479656	PP2D1	A8MPX8	630 aa		12.69	□□□□□ -0.38
APTX-223	ENST00000479656	LONRF3	Q496Y0	759 aa		12.69	□□□□□ -0.38
APTX-223	ENST00000479656		Q4G0T1	1027 aa		12.69	□□□□□ -0.38
APTX-223	ENST00000479656	CKAP2L	Q8IYA6	745 aa		12.69	□□□□□ -0.38
APTX-223	ENST00000479656	SMC1B	Q8NDV3	1235 aa		12.69	□□□□□ -0.38
APTX-223	ENST00000479656	CHST13	Q8NET6	341 aa		12.69	□□□□□ -0.38
APTX-223	ENST00000479656	SDF4	Q9BRK5	362 aa		12.69	□□□□□ -0.38
APTX-223	ENST00000479656	TRPM7	Q96QT4	1865 aa		12.69	□□□□□ -0.38
APTX-223	ENST00000479656		A0A087X0B3	334 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	RGMB	Q6NW40	437 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	ANKRD23	Q86SG2	305 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	NCAPG2	Q86XI2	1143 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	GAS2L3	Q86XJ1	694 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	RASAL3	Q86YV0	1011 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	FAM43A	Q8N2R8	423 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	LENG9	Q96B70	501 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	PTPN18	Q99952	460 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	MOV10L1	Q9BXT6	1211 aa	Known RBP	12.68	□□□□□ -0.38
APTX-223	ENST00000479656	R3HDML	Q9H3Y0	253 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	TTC12	Q9H892	705 aa	Predicted RBP	12.68	□□□□□ -0.38
APTX-223	ENST00000479656	A1CF	Q9NQ94	594 aa	Known RBP	12.68	□□□□□ -0.38
APTX-223	ENST00000479656	CYP39A1	Q9NYL5	469 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	PNMA3	Q9UL41	463 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	RABGAP1	Q9Y3P9	1069 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	EIF2AK2	P19525	551 aa	Known RBP	12.68	□□□□□ -0.38
APTX-223	ENST00000479656	LRSAM1	Q6UWE0	723 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	TIGD1	Q96MW7	591 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	RMDN3	Q96TC7	470 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	KCNMB3	Q9NPA1	279 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	SERTAD1	Q9UHV2	236 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	PCDHA12	Q9UN75	941 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	SLC45A1	Q9Y2W3	748 aa		12.68	□□□□□ -0.38
APTX-223	ENST00000479656	RPTOR	Q8N122	1335 aa		12.67	□□□□□ -0.38
APTX-223	ENST00000479656	IGLV3-22	A0A075B6J6	115 aa		12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms