RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 KIAA0825Q8IV33 1275 aa7.83□□□□□ -1.16
HOXB3-209ENST00000478644 SSH1Q8WYL5 1049 aa7.83□□□□□ -1.16
HOXB3-209ENST00000478644 CITED4Q96RK1 184 aa7.83□□□□□ -1.16
HOXB3-209ENST00000478644 DEFB129Q9H1M3 183 aa7.83□□□□□ -1.16
HOXB3-209ENST00000478644 GSC2O15499 205 aa7.82□□□□□ -1.16
HOXB3-209ENST00000478644 DHX15O43143 795 aaKnown RBP7.82□□□□□ -1.16
HOXB3-209ENST00000478644 FRAT2O75474 233 aaPredicted RBP7.82□□□□□ -1.16
HOXB3-209ENST00000478644 SERPINB4P48594 390 aa7.82□□□□□ -1.16
HOXB3-209ENST00000478644 ARL4DP49703 201 aa7.82□□□□□ -1.16
HOXB3-209ENST00000478644 RABL6Q3YEC7 729 aaPredicted RBP7.82□□□□□ -1.16
HOXB3-209ENST00000478644 LDLRAD1Q5T700 205 aa7.82□□□□□ -1.16
HOXB3-209ENST00000478644 GALNT12Q8IXK2 581 aa7.82□□□□□ -1.16
HOXB3-209ENST00000478644 TDRD7Q8NHU6 1098 aaKnown RBP7.82□□□□□ -1.16
HOXB3-209ENST00000478644 UBASH3BQ8TF42 649 aa7.82□□□□□ -1.16
HOXB3-209ENST00000478644 MCOLN1Q9GZU1 580 aa7.82□□□□□ -1.16
HOXB3-209ENST00000478644 ZBED9Q6R2W3 1325 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 SCN9AQ15858 1988 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 SCO2A0A1W2PP80 73 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 F6X3S4 739 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 HYAL3O43820 417 aaPredicted RBP7.81□□□□□ -1.16
HOXB3-209ENST00000478644 EIF4EBP3O60516 100 aaPredicted RBP7.81□□□□□ -1.16
HOXB3-209ENST00000478644 TAF5LO75529 589 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 PDE8BO95263 885 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 IFIT1P09914 478 aaKnown RBP7.81□□□□□ -1.16
HOXB3-209ENST00000478644 RBM5P52756 815 aaKnown RBP eCLIP7.81□□□□□ -1.16
HOXB3-209ENST00000478644 RARSP54136 660 aaKnown RBP7.81□□□□□ -1.16
HOXB3-209ENST00000478644 IKBKEQ14164 716 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 CFAP100Q494V2 611 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 MFSD14BQ5SR56 506 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 FKBP1CQ5VVH2 108 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 INTS3Q68E01 1043 aaKnown RBP7.81□□□□□ -1.16
HOXB3-209ENST00000478644 ANKRD34AQ69YU3 496 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 GLYCTKQ8IVS8 523 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 ANKRD13AQ8IZ07 590 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 ARHGAP45Q92619 1136 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 MYRFLQ96LU7 910 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 FAM129BQ96TA1 746 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 RNF208Q9H0X6 261 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 GNL3LQ9NVN8 582 aaKnown RBP7.81□□□□□ -1.16
HOXB3-209ENST00000478644 TMOD2Q9NZR1 351 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 BRPF3Q9ULD4 1205 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 RIPOR2Q9Y4F9 1068 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 AKAP11Q9UKA4 1901 aa7.81□□□□□ -1.16
HOXB3-209ENST00000478644 POLR2AP24928 1970 aaKnown RBP7.8□□□□□ -1.16
HOXB3-209ENST00000478644 IRS2Q9Y4H2 1338 aa7.8□□□□□ -1.16
HOXB3-209ENST00000478644 UBE2Q2LH0YL09 131 aa7.8□□□□□ -1.16
HOXB3-209ENST00000478644 H3BRB1 525 aa7.8□□□□□ -1.16
HOXB3-209ENST00000478644 IGHA2P01877 340 aa7.8□□□□□ -1.16
HOXB3-209ENST00000478644 NEFLP07196 543 aa7.8□□□□□ -1.16
HOXB3-209ENST00000478644 METTL24Q5JXM2 366 aa7.8□□□□□ -1.16
HOXB3-209ENST00000478644 HGSNATQ68CP4 663 aa7.8□□□□□ -1.16
HOXB3-209ENST00000478644 FBXO33Q7Z6M2 555 aa7.8□□□□□ -1.16
HOXB3-209ENST00000478644 CCNJLQ8IV13 435 aa7.8□□□□□ -1.16
HOXB3-209ENST00000478644 FAM177A1Q8N128 213 aaPredicted RBP7.8□□□□□ -1.16
HOXB3-209ENST00000478644 ZGPATQ8N5A5 531 aaKnown RBP7.8□□□□□ -1.16
HOXB3-209ENST00000478644 WDR66Q8TBY9 1149 aa7.8□□□□□ -1.16
HOXB3-209ENST00000478644 LPIN2Q92539 896 aa7.8□□□□□ -1.16
HOXB3-209ENST00000478644 FAM84BQ96KN1 310 aaPredicted RBP7.8□□□□□ -1.16
HOXB3-209ENST00000478644 API5Q9BZZ5 524 aaKnown RBP7.8□□□□□ -1.16
HOXB3-209ENST00000478644 TUT1Q9H6E5 874 aaKnown RBP7.8□□□□□ -1.16
HOXB3-209ENST00000478644 ZCCHC17Q9NP64 241 aaKnown RBP7.8□□□□□ -1.16
HOXB3-209ENST00000478644 LATS2Q9NRM7 1088 aa7.8□□□□□ -1.16
HOXB3-209ENST00000478644 STOML1Q9UBI4 398 aa7.8□□□□□ -1.16
HOXB3-209ENST00000478644 ANGEL1Q9UNK9 670 aaKnown RBP7.8□□□□□ -1.16
HOXB3-209ENST00000478644 IPO8O15397 1037 aaKnown RBP7.79□□□□□ -1.16
HOXB3-209ENST00000478644 PLIN1O60240 522 aa7.79□□□□□ -1.16
HOXB3-209ENST00000478644 FKTNO75072 461 aa7.79□□□□□ -1.16
HOXB3-209ENST00000478644 CIAO1O76071 339 aa7.79□□□□□ -1.16
HOXB3-209ENST00000478644 IGLV1-40P01703 118 aa7.79□□□□□ -1.16
HOXB3-209ENST00000478644 ESRRAP11474 423 aaPredicted RBP7.79□□□□□ -1.16
HOXB3-209ENST00000478644 CAPN2P17655 700 aa7.79□□□□□ -1.16
HOXB3-209ENST00000478644 GTF2A2P52657 109 aa7.79□□□□□ -1.16
HOXB3-209ENST00000478644 PTPN12Q05209 780 aaKnown RBP7.79□□□□□ -1.16
HOXB3-209ENST00000478644 PUM3Q15397 648 aaKnown RBP7.79□□□□□ -1.16
HOXB3-209ENST00000478644 HHIPL2Q6UWX4 724 aa7.79□□□□□ -1.16
HOXB3-209ENST00000478644 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.79□□□□□ -1.16
HOXB3-209ENST00000478644 FAM83AQ86UY5 434 aa7.79□□□□□ -1.16
HOXB3-209ENST00000478644 TEKT1Q969V4 418 aa7.79□□□□□ -1.16
HOXB3-209ENST00000478644 ERO1AQ96HE7 468 aa7.79□□□□□ -1.16
HOXB3-209ENST00000478644 SMC4Q9NTJ3 1288 aa7.79□□□□□ -1.16
HOXB3-209ENST00000478644 TTF2Q9UNY4 1162 aaKnown RBP7.79□□□□□ -1.16
HOXB3-209ENST00000478644 IVNS1ABPQ9Y6Y0 642 aa7.79□□□□□ -1.16
HOXB3-209ENST00000478644 ASTN2O75129 1339 aaPredicted RBP7.78□□□□□ -1.16
HOXB3-209ENST00000478644 A0A1W2PP55 124 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 NDUFB5O43674 189 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 MAP4K4O95819 1239 aaPredicted RBP7.78□□□□□ -1.16
HOXB3-209ENST00000478644 GNAI3P08754 354 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 NBPF7P0C2Y1 421 aaPredicted RBP7.78□□□□□ -1.16
HOXB3-209ENST00000478644 SLC5A1P13866 664 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 KIAA0319Q5VV43 1072 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 DCAF15Q66K64 600 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 FBXO46Q6PJ61 603 aaPredicted RBP7.78□□□□□ -1.16
HOXB3-209ENST00000478644 CLEC10AQ8IUN9 316 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 SLC7A3Q8WY07 619 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 UTP4Q969X6 686 aaKnown RBP7.78□□□□□ -1.16
HOXB3-209ENST00000478644 SUCLG2Q96I99 432 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 PRMT6Q96LA8 375 aaPredicted RBP7.78□□□□□ -1.16
HOXB3-209ENST00000478644 TCF12Q99081 682 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 TMPRSS13Q9BYE2 586 aa7.78□□□□□ -1.16
HOXB3-209ENST00000478644 USP44Q9H0E7 712 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms