RNA–Protein interactions for RNA: ENST00000478454.5

CCNL1-220, Transcript of cyclin L1, humanhuman

TSL 4

Gene CCNL1, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-220ENST00000478454 RNPC3Q96LT9 517 aaKnown RBP5.95□□□□□ -1.46
CCNL1-220ENST00000478454 CDC6Q99741 560 aa5.95□□□□□ -1.46
CCNL1-220ENST00000478454 DHRS4Q9BTZ2 278 aa5.95□□□□□ -1.46
CCNL1-220ENST00000478454 PHF20Q9BVI0 1012 aa5.95□□□□□ -1.46
CCNL1-220ENST00000478454 MARCH2Q9P0N8 246 aa5.95□□□□□ -1.46
CCNL1-220ENST00000478454 PLA2G2DQ9UNK4 145 aa5.95□□□□□ -1.46
CCNL1-220ENST00000478454 MRPS23Q9Y3D9 190 aaKnown RBP5.95□□□□□ -1.46
CCNL1-220ENST00000478454 TRAF6Q9Y4K3 522 aa5.95□□□□□ -1.46
CCNL1-220ENST00000478454 TIMM13Q9Y5L4 95 aaPredicted RBP5.95□□□□□ -1.46
CCNL1-220ENST00000478454 OR14I1A6ND48 311 aa5.94□□□□□ -1.46
CCNL1-220ENST00000478454 YBX1P67809 324 aaKnown RBP5.94□□□□□ -1.46
CCNL1-220ENST00000478454 DCP1AQ9NPI6 582 aaPredicted RBP5.94□□□□□ -1.46
CCNL1-220ENST00000478454 GPR27Q9NS67 375 aa5.94□□□□□ -1.46
CCNL1-220ENST00000478454 FAM53CQ9NYF3 392 aa5.94□□□□□ -1.46
CCNL1-220ENST00000478454 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.94□□□□□ -1.46
CCNL1-220ENST00000478454 PPARGC1AQ9UBK2 798 aaKnown RBP5.94□□□□□ -1.46
CCNL1-220ENST00000478454 ZC3H12DA2A288 527 aaKnown RBP5.93□□□□□ -1.46
CCNL1-220ENST00000478454 C22orf46C9J442 243 aa5.93□□□□□ -1.46
CCNL1-220ENST00000478454 PAX4O43316 350 aa5.93□□□□□ -1.46
CCNL1-220ENST00000478454 KRT1P04264 644 aa5.93□□□□□ -1.46
CCNL1-220ENST00000478454 NTRK1P04629 796 aa5.93□□□□□ -1.46
CCNL1-220ENST00000478454 VIPR1P32241 457 aa5.93□□□□□ -1.46
CCNL1-220ENST00000478454 ARL4AP40617 200 aa5.93□□□□□ -1.46
CCNL1-220ENST00000478454 RPL11P62913 178 aaKnown RBP5.93□□□□□ -1.46
CCNL1-220ENST00000478454 ZNF648Q5T619 568 aaPredicted RBP5.93□□□□□ -1.46
CCNL1-220ENST00000478454 STYK1Q6J9G0 422 aa5.93□□□□□ -1.46
CCNL1-220ENST00000478454 CEP68Q76N32 757 aa5.93□□□□□ -1.46
CCNL1-220ENST00000478454 JAZF1Q86VZ6 243 aa5.93□□□□□ -1.46
CCNL1-220ENST00000478454 Q8N1Y9 231 aa5.93□□□□□ -1.46
CCNL1-220ENST00000478454 DCAF4Q8WV16 495 aa5.93□□□□□ -1.46
CCNL1-220ENST00000478454 MCOLN1Q9GZU1 580 aa5.93□□□□□ -1.46
CCNL1-220ENST00000478454 EPB41L4BQ9H329 900 aa5.93□□□□□ -1.46
CCNL1-220ENST00000478454 SIT1Q9Y3P8 196 aa5.93□□□□□ -1.46
CCNL1-220ENST00000478454 SRGAP3O43295 1099 aa5.92□□□□□ -1.46
CCNL1-220ENST00000478454 MPOP05164 745 aa5.92□□□□□ -1.46
CCNL1-220ENST00000478454 SUMO1P63165 101 aaKnown RBP5.92□□□□□ -1.46
CCNL1-220ENST00000478454 CBX2Q14781 532 aaPredicted RBP5.92□□□□□ -1.46
CCNL1-220ENST00000478454 RAB3GAP1Q15042 981 aa5.92□□□□□ -1.46
CCNL1-220ENST00000478454 PLEKHN1Q494U1 663 aaPredicted RBP5.92□□□□□ -1.46
CCNL1-220ENST00000478454 PAQR3Q6TCH7 311 aa5.92□□□□□ -1.46
CCNL1-220ENST00000478454 USP33Q8TEY7 942 aa5.92□□□□□ -1.46
CCNL1-220ENST00000478454 SLC26A8Q96RN1 970 aa5.92□□□□□ -1.46
CCNL1-220ENST00000478454 SGPP1Q9BX95 441 aa5.92□□□□□ -1.46
CCNL1-220ENST00000478454 MRPL42Q9Y6G3 142 aaKnown RBP5.92□□□□□ -1.46
CCNL1-220ENST00000478454 A0A1W2PQJ5 194 aa5.91□□□□□ -1.46
CCNL1-220ENST00000478454 F8W031 263 aaPredicted RBP5.91□□□□□ -1.46
CCNL1-220ENST00000478454 CYBBP04839 570 aa5.91□□□□□ -1.46
CCNL1-220ENST00000478454 PRR5P85299 388 aa5.91□□□□□ -1.46
CCNL1-220ENST00000478454 LSAMPQ13449 338 aa5.91□□□□□ -1.46
CCNL1-220ENST00000478454 WWC2Q6AWC2 1192 aa5.91□□□□□ -1.46
CCNL1-220ENST00000478454 GIMAP6Q6P9H5 292 aa5.91□□□□□ -1.46
CCNL1-220ENST00000478454 RSPO2Q6UXX9 243 aaPredicted RBP5.91□□□□□ -1.46
CCNL1-220ENST00000478454 LBX2Q6XYB7 198 aa5.91□□□□□ -1.46
CCNL1-220ENST00000478454 POU5F2Q8N7G0 328 aa5.91□□□□□ -1.46
CCNL1-220ENST00000478454 ZSWIM2Q8NEG5 633 aa5.91□□□□□ -1.46
CCNL1-220ENST00000478454 JAM3Q9BX67 310 aa5.91□□□□□ -1.46
CCNL1-220ENST00000478454 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
CCNL1-220ENST00000478454 BCAS3Q9H6U6 928 aa5.91□□□□□ -1.46
CCNL1-220ENST00000478454 GCM1Q9NP62 436 aa5.91□□□□□ -1.46
CCNL1-220ENST00000478454 X6R8D5 127 aa5.91□□□□□ -1.46
CCNL1-220ENST00000478454 ESYT3A0FGR9 886 aa5.9□□□□□ -1.46
CCNL1-220ENST00000478454 PPP1R12AO14974 1030 aaPredicted RBP5.9□□□□□ -1.46
CCNL1-220ENST00000478454 GPR85P60893 370 aa5.9□□□□□ -1.46
CCNL1-220ENST00000478454 SRSF3P84103 164 aaKnown RBP5.9□□□□□ -1.46
CCNL1-220ENST00000478454 ZC3H12BQ5HYM0 836 aaKnown RBP5.9□□□□□ -1.46
CCNL1-220ENST00000478454 SLC7A14Q8TBB6 771 aa5.9□□□□□ -1.46
CCNL1-220ENST00000478454 PTPRN2Q92932 1015 aa5.9□□□□□ -1.46
CCNL1-220ENST00000478454 TRMT2BQ96GJ1 504 aaKnown RBP5.9□□□□□ -1.46
CCNL1-220ENST00000478454 TMEM169Q96HH4 297 aa5.9□□□□□ -1.46
CCNL1-220ENST00000478454 CHAMP1Q96JM3 812 aa5.9□□□□□ -1.46
CCNL1-220ENST00000478454 CNTD2Q9H8S5 307 aa5.9□□□□□ -1.46
CCNL1-220ENST00000478454 SLC52A2Q9HAB3 445 aa5.9□□□□□ -1.46
CCNL1-220ENST00000478454 CLDND1Q9NY35 253 aa5.9□□□□□ -1.46
CCNL1-220ENST00000478454 MBD1Q9UIS9 605 aaPredicted RBP5.9□□□□□ -1.46
CCNL1-220ENST00000478454 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.89□□□□□ -1.47
CCNL1-220ENST00000478454 MYO1BO43795 1136 aa5.89□□□□□ -1.47
CCNL1-220ENST00000478454 PEX10O60683 326 aa5.89□□□□□ -1.47
CCNL1-220ENST00000478454 MAPKAPK2P49137 400 aa5.89□□□□□ -1.47
CCNL1-220ENST00000478454 NR1I3Q14994 352 aa5.89□□□□□ -1.47
CCNL1-220ENST00000478454 SYDE1Q6ZW31 735 aaPredicted RBP5.89□□□□□ -1.47
CCNL1-220ENST00000478454 TMC6Q7Z403 805 aa5.89□□□□□ -1.47
CCNL1-220ENST00000478454 IFNL3Q8IZI9 196 aa5.89□□□□□ -1.47
CCNL1-220ENST00000478454 FBXO15Q8NCQ5 510 aaPredicted RBP5.89□□□□□ -1.47
CCNL1-220ENST00000478454 GSTCDQ8NEC7 633 aa5.89□□□□□ -1.47
CCNL1-220ENST00000478454 SCLYQ96I15 445 aa5.89□□□□□ -1.47
CCNL1-220ENST00000478454 CLUHP3Q96NS8 147 aa5.89□□□□□ -1.47
CCNL1-220ENST00000478454 IPO9Q96P70 1041 aaKnown RBP5.89□□□□□ -1.47
CCNL1-220ENST00000478454 NCOA5Q9HCD5 579 aaKnown RBP5.89□□□□□ -1.47
CCNL1-220ENST00000478454 TMEM260Q9NX78 707 aa5.89□□□□□ -1.47
CCNL1-220ENST00000478454 PCDHA9Q9Y5H5 950 aa5.89□□□□□ -1.47
CCNL1-220ENST00000478454 PCDHA8Q9Y5H6 950 aa5.89□□□□□ -1.47
CCNL1-220ENST00000478454 H7BY64 318 aa5.88□□□□□ -1.47
CCNL1-220ENST00000478454 HRKO00198 91 aa5.88□□□□□ -1.47
CCNL1-220ENST00000478454 ETV2O00321 342 aaPredicted RBP5.88□□□□□ -1.47
CCNL1-220ENST00000478454 SGSM2O43147 1006 aa5.88□□□□□ -1.47
CCNL1-220ENST00000478454 FARP2O94887 1054 aaPredicted RBP5.88□□□□□ -1.47
CCNL1-220ENST00000478454 RAPGEF3O95398 923 aa5.88□□□□□ -1.47
CCNL1-220ENST00000478454 FBLN1P23142 703 aa5.88□□□□□ -1.47
CCNL1-220ENST00000478454 GTF2A2P52657 109 aa5.88□□□□□ -1.47
CCNL1-220ENST00000478454 EPHB3P54753 998 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms