RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 HSPA9P38646 679 aaKnown RBP10.87□□□□□ -0.67
COL13A1-207ENST00000478219 ABL2P42684 1182 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 ERVK-9P63128 1117 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 ICA1Q05084 483 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 RRP12Q5JTH9 1297 aaKnown RBP10.87□□□□□ -0.67
COL13A1-207ENST00000478219 TRIM22Q8IYM9 498 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 TRIM47Q96LD4 638 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 NLRP3Q96P20 1036 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 MTFR1LQ9H019 292 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 NDST4Q9H3R1 872 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 NOVA2Q9UNW9 492 aaKnown RBP10.87□□□□□ -0.67
COL13A1-207ENST00000478219 TRIM37O94972 964 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 DEXIO95424 95 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 FTCDO95954 541 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 MCAMP43121 646 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 DNM2P50570 870 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 RASSF7Q02833 373 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 MIIPQ5JXC2 388 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 CPLX4Q7Z7G2 160 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 KLHL7Q8IXQ5 586 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 C1orf131Q8NDD1 294 aaKnown RBP10.87□□□□□ -0.67
COL13A1-207ENST00000478219 WASF1Q92558 559 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 DUSP9Q99956 384 aaKnown RBP10.87□□□□□ -0.67
COL13A1-207ENST00000478219 FAM167BQ9BTA0 163 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 KDM4CQ9H3R0 1056 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 EPB41L4AQ9HCS5 686 aaPredicted RBP10.87□□□□□ -0.67
COL13A1-207ENST00000478219 GGT7Q9UJ14 662 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 TBX22Q9Y458 520 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 PARP4Q9UKK3 1724 aaKnown RBP10.87□□□□□ -0.67
COL13A1-207ENST00000478219 SIPA1L3O60292 1781 aaPredicted RBP10.87□□□□□ -0.67
COL13A1-207ENST00000478219 SPEF2Q9C093 1822 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 MYH7BA7E2Y1 1941 aa10.87□□□□□ -0.67
COL13A1-207ENST00000478219 CCT8L1PA6NM43 557 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 USO1O60763 962 aaKnown RBP10.86□□□□□ -0.67
COL13A1-207ENST00000478219 ADD2P35612 726 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 LIFRP42702 1097 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 MAGOHP61326 146 aaKnown RBP10.86□□□□□ -0.67
COL13A1-207ENST00000478219 PPP2R2AP63151 447 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 KCNJ2P63252 427 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 GFPT1Q06210 699 aaPredicted RBP10.86□□□□□ -0.67
COL13A1-207ENST00000478219 HLTFQ14527 1009 aaKnown RBP eCLIP10.86□□□□□ -0.67
COL13A1-207ENST00000478219 NBPF9Q3BBW0 867 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 ODF2Q5BJF6 829 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 FAM133BQ5BKY9 247 aaKnown RBP10.86□□□□□ -0.67
COL13A1-207ENST00000478219 GKAP1Q5VSY0 366 aaPredicted RBP10.86□□□□□ -0.67
COL13A1-207ENST00000478219 MAGOHBQ96A72 148 aaKnown RBP10.86□□□□□ -0.67
COL13A1-207ENST00000478219 PLIN2Q99541 437 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 TSGA10Q9BZW7 698 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 TAF1DQ9H5J8 278 aaPredicted RBP10.86□□□□□ -0.67
COL13A1-207ENST00000478219 ARHGEF10LQ9HCE6 1279 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 KCNMB3Q9NPA1 279 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 PLCB1Q9NQ66 1216 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 SMIM22K7EJ46 135 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 SNUPNO95149 360 aaKnown RBP10.86□□□□□ -0.67
COL13A1-207ENST00000478219 MYH1P12882 1939 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 EEF1GP26641 437 aaKnown RBP10.86□□□□□ -0.67
COL13A1-207ENST00000478219 SLC1A4P43007 532 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 RAB27AP51159 221 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 PKN1Q16512 942 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 CFAP221Q4G0U5 840 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 TTI2Q6NXR4 508 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 CCDC63Q8NA47 563 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.86□□□□□ -0.67
COL13A1-207ENST00000478219 LMTK3Q96Q04 1460 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 PIH1D3Q9NQM4 214 aaKnown RBP10.86□□□□□ -0.67
COL13A1-207ENST00000478219 SLC5A4Q9NY91 659 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 SLC12A4Q9UP95 1085 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 AMOTL2Q9Y2J4 779 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 THRAP3Q9Y2W1 955 aaKnown RBP10.86□□□□□ -0.67
COL13A1-207ENST00000478219 ARFGEF2Q9Y6D5 1785 aa10.86□□□□□ -0.67
COL13A1-207ENST00000478219 PKD1L3Q7Z443 1732 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 ORC4O43929 436 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 CAND2O75155 1236 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 CTNNA1P35221 906 aaKnown RBP10.85□□□□□ -0.67
COL13A1-207ENST00000478219 WHAMMQ8TF30 809 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 LRRC15Q8TF66 581 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 BATF3Q9NR55 127 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 FAM207AQ9NSI2 230 aaPredicted RBP10.85□□□□□ -0.67
COL13A1-207ENST00000478219 CEP126Q9P2H0 1117 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 SLC4A4Q9Y6R1 1079 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 SOS2Q07890 1332 aaPredicted RBP10.85□□□□□ -0.67
COL13A1-207ENST00000478219 ZNF532Q9HCE3 1301 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 GOLGA6L10A6NI86 522 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 PP2D1A8MPX8 630 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 IDH1O75874 414 aaKnown RBP10.85□□□□□ -0.67
COL13A1-207ENST00000478219 PECAM1P16284 738 aaPredicted RBP10.85□□□□□ -0.67
COL13A1-207ENST00000478219 RBM5P52756 815 aaKnown RBP eCLIP10.85□□□□□ -0.67
COL13A1-207ENST00000478219 RWDD2BP57060 319 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 NPY5RQ15761 445 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 PTPROQ16827 1216 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 AMOTQ4VCS5 1084 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 ERICH1Q86X53 443 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 ARFGAP2Q8N6H7 521 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 C3orf20Q8ND61 904 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 CCDC47Q96A33 483 aaKnown RBP10.85□□□□□ -0.67
COL13A1-207ENST00000478219 FERMT2Q96AC1 680 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 ALS2CR12Q96Q35 445 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 IRAK4Q9NWZ3 460 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 PLAGL2Q9UPG8 496 aa10.85□□□□□ -0.67
COL13A1-207ENST00000478219 AKR1B10O60218 316 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms