RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 ASGR1P07306 291 aa16.38■□□□□ 0.21
PDE6D-204ENST00000477748 RAG1P15918 1043 aa16.38■□□□□ 0.21
PDE6D-204ENST00000477748 RXRAP19793 462 aa16.38■□□□□ 0.21
PDE6D-204ENST00000477748 GNAQP50148 359 aa16.38■□□□□ 0.21
PDE6D-204ENST00000477748 MRPL12P52815 198 aaKnown RBP16.38■□□□□ 0.21
PDE6D-204ENST00000477748 TNFAIP2Q03169 654 aa16.38■□□□□ 0.21
PDE6D-204ENST00000477748 TRAF1Q13077 416 aa16.38■□□□□ 0.21
PDE6D-204ENST00000477748 GNASQ5JWF2 1037 aa16.38■□□□□ 0.21
PDE6D-204ENST00000477748 FAM109BQ6ICB4 259 aaPredicted RBP16.38■□□□□ 0.21
PDE6D-204ENST00000477748 SYNE3Q6ZMZ3 975 aa16.38■□□□□ 0.21
PDE6D-204ENST00000477748 NOL8Q76FK4 1167 aaKnown RBP16.38■□□□□ 0.21
PDE6D-204ENST00000477748 DNERQ8NFT8 737 aa16.38■□□□□ 0.21
PDE6D-204ENST00000477748 PIBF1Q8WXW3 757 aa16.38■□□□□ 0.21
PDE6D-204ENST00000477748 COL25A1Q9BXS0 654 aaPredicted RBP16.38■□□□□ 0.21
PDE6D-204ENST00000477748 TMEM39AQ9NV64 488 aa16.38■□□□□ 0.21
PDE6D-204ENST00000477748 PCDHA1Q9Y5I3 950 aa16.38■□□□□ 0.21
PDE6D-204ENST00000477748 PNMA6FA0A0J9YX94 578 aa16.37■□□□□ 0.21
PDE6D-204ENST00000477748 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.37■□□□□ 0.21
PDE6D-204ENST00000477748 CFBP00751 764 aa16.37■□□□□ 0.21
PDE6D-204ENST00000477748 HMGB1P09429 215 aaKnown RBP16.37■□□□□ 0.21
PDE6D-204ENST00000477748 EXOSC10Q01780 885 aaKnown RBP16.37■□□□□ 0.21
PDE6D-204ENST00000477748 PDE4DQ08499 809 aa16.37■□□□□ 0.21
PDE6D-204ENST00000477748 FAAP100Q0VG06 881 aa16.37■□□□□ 0.21
PDE6D-204ENST00000477748 TLK2Q86UE8 772 aa16.37■□□□□ 0.21
PDE6D-204ENST00000477748 SGMS1Q86VZ5 419 aa16.37■□□□□ 0.21
PDE6D-204ENST00000477748 RAB11FIP4Q86YS3 637 aa16.37■□□□□ 0.21
PDE6D-204ENST00000477748 SYTL5Q8TDW5 730 aaPredicted RBP16.37■□□□□ 0.21
PDE6D-204ENST00000477748 KCNB2Q92953 911 aa16.37■□□□□ 0.21
PDE6D-204ENST00000477748 LZTS2Q9BRK4 669 aa16.37■□□□□ 0.21
PDE6D-204ENST00000477748 PDGFCQ9NRA1 345 aa16.37■□□□□ 0.21
PDE6D-204ENST00000477748 GNEQ9Y223 722 aaKnown RBP16.37■□□□□ 0.21
PDE6D-204ENST00000477748 STXBP5LQ9Y2K9 1186 aa16.37■□□□□ 0.21
PDE6D-204ENST00000477748 Q9Y3F1 56 aa16.37■□□□□ 0.21
PDE6D-204ENST00000477748 CDH23Q9H251 3354 aa16.37■□□□□ 0.21
PDE6D-204ENST00000477748 UNC80Q8N2C7 3258 aa16.36■□□□□ 0.21
PDE6D-204ENST00000477748 CTAGE5O15320 804 aa16.36■□□□□ 0.21
PDE6D-204ENST00000477748 ZEB2O60315 1214 aa16.36■□□□□ 0.21
PDE6D-204ENST00000477748 CABYRO75952 493 aa16.36■□□□□ 0.21
PDE6D-204ENST00000477748 SMARCA1P28370 1054 aa16.36■□□□□ 0.21
PDE6D-204ENST00000477748 FPGSQ05932 587 aa16.36■□□□□ 0.21
PDE6D-204ENST00000477748 SHHQ15465 462 aa16.36■□□□□ 0.21
PDE6D-204ENST00000477748 IQSEC1Q6DN90 963 aa16.36■□□□□ 0.21
PDE6D-204ENST00000477748 TAPT1Q6NXT6 567 aa16.36■□□□□ 0.21
PDE6D-204ENST00000477748 Q7L0L9 218 aa16.36■□□□□ 0.21
PDE6D-204ENST00000477748 MICU3Q86XE3 530 aa16.36■□□□□ 0.21
PDE6D-204ENST00000477748 RRP36Q96EU6 259 aaKnown RBP16.36■□□□□ 0.21
PDE6D-204ENST00000477748 JAKMIP1Q96N16 626 aaKnown RBP16.36■□□□□ 0.21
PDE6D-204ENST00000477748 TAAR1Q96RJ0 339 aa16.36■□□□□ 0.21
PDE6D-204ENST00000477748 SPZ1Q9BXG8 430 aa16.36■□□□□ 0.21
PDE6D-204ENST00000477748 SEZ6LQ9BYH1 1024 aa16.36■□□□□ 0.21
PDE6D-204ENST00000477748 AP5M1Q9H0R1 490 aa16.36■□□□□ 0.21
PDE6D-204ENST00000477748 SNX14Q9Y5W7 946 aa16.36■□□□□ 0.21
PDE6D-204ENST00000477748 ARVCFO00192 962 aa16.35■□□□□ 0.21
PDE6D-204ENST00000477748 PLEKHA8P1O95397 391 aa16.35■□□□□ 0.21
PDE6D-204ENST00000477748 SMPD1P17405 629 aa16.35■□□□□ 0.21
PDE6D-204ENST00000477748 ITGB8P26012 769 aa16.35■□□□□ 0.21
PDE6D-204ENST00000477748 CDK7P50613 346 aa16.35■□□□□ 0.21
PDE6D-204ENST00000477748 FGD1P98174 961 aa16.35■□□□□ 0.21
PDE6D-204ENST00000477748 FSCN1Q16658 493 aaKnown RBP16.35■□□□□ 0.21
PDE6D-204ENST00000477748 C9orf50Q5SZB4 431 aa16.35■□□□□ 0.21
PDE6D-204ENST00000477748 FANCBQ8NB91 859 aa16.35■□□□□ 0.21
PDE6D-204ENST00000477748 NSUN6Q8TEA1 469 aaKnown RBP16.35■□□□□ 0.21
PDE6D-204ENST00000477748 VTI1AQ96AJ9 217 aa16.35■□□□□ 0.21
PDE6D-204ENST00000477748 MTMR10Q9NXD2 777 aa16.35■□□□□ 0.21
PDE6D-204ENST00000477748 COL20A1Q9P218 1284 aa16.35■□□□□ 0.21
PDE6D-204ENST00000477748 TBX21Q9UL17 535 aa16.35■□□□□ 0.21
PDE6D-204ENST00000477748 OPLAHO14841 1288 aa16.34■□□□□ 0.21
PDE6D-204ENST00000477748 TLR3O15455 904 aaKnown RBP16.34■□□□□ 0.21
PDE6D-204ENST00000477748 EPB41L2O43491 1005 aaKnown RBP16.34■□□□□ 0.21
PDE6D-204ENST00000477748 TIMP1P01033 207 aa16.34■□□□□ 0.21
PDE6D-204ENST00000477748 CPA1P15085 419 aa16.34■□□□□ 0.21
PDE6D-204ENST00000477748 EDNRBP24530 442 aa16.34■□□□□ 0.21
PDE6D-204ENST00000477748 HSD17B4P51659 736 aa16.34■□□□□ 0.21
PDE6D-204ENST00000477748 IRX5P78411 483 aaPredicted RBP16.34■□□□□ 0.21
PDE6D-204ENST00000477748 SMAD3P84022 425 aaKnown RBP16.34■□□□□ 0.21
PDE6D-204ENST00000477748 APOA5Q6Q788 366 aa16.34■□□□□ 0.21
PDE6D-204ENST00000477748 BLOC1S2Q6QNY1 142 aa16.34■□□□□ 0.21
PDE6D-204ENST00000477748 CMTR1Q8N1G2 835 aaKnown RBP16.34■□□□□ 0.21
PDE6D-204ENST00000477748 SRBD1Q8N5C6 995 aaKnown RBP16.34■□□□□ 0.21
PDE6D-204ENST00000477748 SAMD3Q8N6K7 520 aa16.34■□□□□ 0.21
PDE6D-204ENST00000477748 RMDN3Q96TC7 470 aa16.34■□□□□ 0.21
PDE6D-204ENST00000477748 MAP3K20Q9NYL2 800 aaKnown RBP16.34■□□□□ 0.21
PDE6D-204ENST00000477748 SEC63Q9UGP8 760 aaKnown RBP16.34■□□□□ 0.21
PDE6D-204ENST00000477748 DYNC1LI2O43237 492 aaPredicted RBP16.33■□□□□ 0.2
PDE6D-204ENST00000477748 ZBTB43O43298 467 aa16.33■□□□□ 0.2
PDE6D-204ENST00000477748 BEX3Q00994 111 aa16.33■□□□□ 0.2
PDE6D-204ENST00000477748 GHRHRQ02643 423 aa16.33■□□□□ 0.2
PDE6D-204ENST00000477748 ZNF697Q5TEC3 545 aa16.33■□□□□ 0.2
PDE6D-204ENST00000477748 ARHGEF16Q5VV41 709 aa16.33■□□□□ 0.2
PDE6D-204ENST00000477748 FAM126BQ8IXS8 530 aa16.33■□□□□ 0.2
PDE6D-204ENST00000477748 CCDC82Q8N4S0 544 aa16.33■□□□□ 0.2
PDE6D-204ENST00000477748 RNPC3Q96LT9 517 aaKnown RBP16.33■□□□□ 0.2
PDE6D-204ENST00000477748 WDR11Q9BZH6 1224 aa16.33■□□□□ 0.2
PDE6D-204ENST00000477748 BRPF3Q9ULD4 1205 aa16.33■□□□□ 0.2
PDE6D-204ENST00000477748 KLF18A0A0U1RQI7 1052 aa16.32■□□□□ 0.2
PDE6D-204ENST00000477748 RBM47A0AV96 593 aaKnown RBP16.32■□□□□ 0.2
PDE6D-204ENST00000477748 GCOM1H8Y6P7 765 aaPredicted RBP16.32■□□□□ 0.2
PDE6D-204ENST00000477748 POLR2MP0CAP2 368 aa16.32■□□□□ 0.2
PDE6D-204ENST00000477748 EIF2AK2P19525 551 aaKnown RBP16.32■□□□□ 0.2
PDE6D-204ENST00000477748 PTGS1P23219 599 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 715.4 ms