RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 CHST3Q7LGC8 479 aa18.26■□□□□ 0.51
CLDN11-204ENST00000477531 HOMER1Q86YM7 354 aa18.26■□□□□ 0.51
CLDN11-204ENST00000477531 MTG1Q9BT17 334 aaPredicted RBP18.26■□□□□ 0.51
CLDN11-204ENST00000477531 MAP3K20Q9NYL2 800 aaKnown RBP18.26■□□□□ 0.51
CLDN11-204ENST00000477531 PCDHA1Q9Y5I3 950 aa18.26■□□□□ 0.51
CLDN11-204ENST00000477531 LAMA2P24043 3122 aaKnown RBP18.26■□□□□ 0.51
CLDN11-204ENST00000477531 CD4P01730 458 aa18.25■□□□□ 0.51
CLDN11-204ENST00000477531 EPHB4P54760 987 aa18.25■□□□□ 0.51
CLDN11-204ENST00000477531 PSMC6P62333 389 aa18.25■□□□□ 0.51
CLDN11-204ENST00000477531 SEPT14Q6ZU15 432 aa18.25■□□□□ 0.51
CLDN11-204ENST00000477531 SAMD3Q8N6K7 520 aa18.25■□□□□ 0.51
CLDN11-204ENST00000477531 MTMR8Q96EF0 704 aa18.25■□□□□ 0.51
CLDN11-204ENST00000477531 HIPK3Q9H422 1215 aa18.25■□□□□ 0.51
CLDN11-204ENST00000477531 STXBP5LQ9Y2K9 1186 aa18.25■□□□□ 0.51
CLDN11-204ENST00000477531 MYH6P13533 1939 aa18.24■□□□□ 0.51
CLDN11-204ENST00000477531 SUPT20HL2P0C7V6 817 aa18.24■□□□□ 0.51
CLDN11-204ENST00000477531 PURAQ00577 322 aaKnown RBP18.24■□□□□ 0.51
CLDN11-204ENST00000477531 STOX1Q6ZVD7 989 aa18.24■□□□□ 0.51
CLDN11-204ENST00000477531 ESYT1Q9BSJ8 1104 aa18.24■□□□□ 0.51
CLDN11-204ENST00000477531 COL20A1Q9P218 1284 aa18.24■□□□□ 0.51
CLDN11-204ENST00000477531 TAF6LQ9Y6J9 622 aa18.24■□□□□ 0.51
CLDN11-204ENST00000477531 GRIN2DO15399 1336 aa18.23■□□□□ 0.51
CLDN11-204ENST00000477531 EIF3JO75822 258 aaKnown RBP18.23■□□□□ 0.51
CLDN11-204ENST00000477531 EIF2AK2P19525 551 aaKnown RBP18.23■□□□□ 0.51
CLDN11-204ENST00000477531 CYP2C18P33260 490 aa18.23■□□□□ 0.51
CLDN11-204ENST00000477531 MCM5P33992 734 aa18.23■□□□□ 0.51
CLDN11-204ENST00000477531 TROAPQ12815 778 aa18.23■□□□□ 0.51
CLDN11-204ENST00000477531 PSRC1Q6PGN9 363 aaPredicted RBP18.23■□□□□ 0.51
CLDN11-204ENST00000477531 NFXL1Q6ZNB6 911 aa18.23■□□□□ 0.51
CLDN11-204ENST00000477531 MB21D2Q8IYB1 491 aaPredicted RBP18.23■□□□□ 0.51
CLDN11-204ENST00000477531 TMTC2Q8N394 836 aa18.23■□□□□ 0.51
CLDN11-204ENST00000477531 CTCFLQ8NI51 663 aaPredicted RBP18.23■□□□□ 0.51
CLDN11-204ENST00000477531 COPS5Q92905 334 aa18.23■□□□□ 0.51
CLDN11-204ENST00000477531 FAM161BQ96MY7 647 aa18.23■□□□□ 0.51
CLDN11-204ENST00000477531 PIGSQ96S52 555 aa18.23■□□□□ 0.51
CLDN11-204ENST00000477531 MTA3Q9BTC8 594 aa18.23■□□□□ 0.51
CLDN11-204ENST00000477531 TRPV6Q9H1D0 765 aa18.23■□□□□ 0.51
CLDN11-204ENST00000477531 RIOX1Q9H6W3 641 aa18.23■□□□□ 0.51
CLDN11-204ENST00000477531 ANO2Q9NQ90 1003 aa18.23■□□□□ 0.51
CLDN11-204ENST00000477531 PXMP2Q9NR77 195 aa18.23■□□□□ 0.51
CLDN11-204ENST00000477531 PNMA6FA0A0J9YX94 578 aa18.22■□□□□ 0.51
CLDN11-204ENST00000477531 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.22■□□□□ 0.51
CLDN11-204ENST00000477531 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.22■□□□□ 0.51
CLDN11-204ENST00000477531 A6NJR5 290 aa18.22■□□□□ 0.51
CLDN11-204ENST00000477531 GCOM1H8Y6P7 765 aaPredicted RBP18.22■□□□□ 0.51
CLDN11-204ENST00000477531 B4GALT4O60513 344 aa18.22■□□□□ 0.51
CLDN11-204ENST00000477531 GH1P01241 217 aa18.22■□□□□ 0.51
CLDN11-204ENST00000477531 NR3C2P08235 984 aa18.22■□□□□ 0.51
CLDN11-204ENST00000477531 POLR2MP0CAP2 368 aa18.22■□□□□ 0.51
CLDN11-204ENST00000477531 CSF2RAP15509 400 aa18.22■□□□□ 0.51
CLDN11-204ENST00000477531 KIF5BP33176 963 aa18.22■□□□□ 0.51
CLDN11-204ENST00000477531 HSD17B4P51659 736 aa18.22■□□□□ 0.51
CLDN11-204ENST00000477531 FAM47CQ5HY64 1035 aa18.22■□□□□ 0.51
CLDN11-204ENST00000477531 CCDC62Q6P9F0 684 aa18.22■□□□□ 0.51
CLDN11-204ENST00000477531 SLC17A8Q8NDX2 589 aa18.22■□□□□ 0.51
CLDN11-204ENST00000477531 IGDCC4Q8TDY8 1250 aa18.22■□□□□ 0.51
CLDN11-204ENST00000477531 MAP3K14Q99558 947 aa18.22■□□□□ 0.51
CLDN11-204ENST00000477531 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.22■□□□□ 0.51
CLDN11-204ENST00000477531 LSG1Q9H089 658 aaKnown RBP18.22■□□□□ 0.51
CLDN11-204ENST00000477531 ALDH8A1Q9H2A2 487 aaPredicted RBP18.22■□□□□ 0.51
CLDN11-204ENST00000477531 MTIF3Q9H2K0 278 aaKnown RBP18.22■□□□□ 0.51
CLDN11-204ENST00000477531 SENP2Q9HC62 589 aa18.22■□□□□ 0.51
CLDN11-204ENST00000477531 CCDC69A6NI79 296 aa18.21■□□□□ 0.51
CLDN11-204ENST00000477531 PRC1O43663 620 aa18.21■□□□□ 0.51
CLDN11-204ENST00000477531 ARIH2O95376 493 aa18.21■□□□□ 0.51
CLDN11-204ENST00000477531 GNAQP50148 359 aa18.21■□□□□ 0.51
CLDN11-204ENST00000477531 ANTXR2P58335 489 aa18.21■□□□□ 0.51
CLDN11-204ENST00000477531 LY6KQ17RY6 165 aa18.21■□□□□ 0.51
CLDN11-204ENST00000477531 BMP2KLQ5H9B9 411 aa18.21■□□□□ 0.51
CLDN11-204ENST00000477531 TMEM240Q5SV17 173 aa18.21■□□□□ 0.51
CLDN11-204ENST00000477531 RNF20Q5VTR2 975 aa18.21■□□□□ 0.51
CLDN11-204ENST00000477531 RPUSD2Q8IZ73 545 aaKnown RBP18.21■□□□□ 0.51
CLDN11-204ENST00000477531 TMEM87BQ96K49 555 aa18.21■□□□□ 0.51
CLDN11-204ENST00000477531 IL23AQ9NPF7 189 aa18.21■□□□□ 0.51
CLDN11-204ENST00000477531 MRVI1Q9Y6F6 885 aa18.21■□□□□ 0.51
CLDN11-204ENST00000477531 SLC27A2O14975 620 aa18.2■□□□□ 0.5
CLDN11-204ENST00000477531 PPP1R11O60927 126 aaPredicted RBP18.2■□□□□ 0.5
CLDN11-204ENST00000477531 DDAH1O94760 285 aa18.2■□□□□ 0.5
CLDN11-204ENST00000477531 ACRP10323 421 aa18.2■□□□□ 0.5
CLDN11-204ENST00000477531 MYCLP12524 364 aaPredicted RBP18.2■□□□□ 0.5
CLDN11-204ENST00000477531 GHRHRQ02643 423 aa18.2■□□□□ 0.5
CLDN11-204ENST00000477531 NBPF20Q3BBV1 942 aa18.2■□□□□ 0.5
CLDN11-204ENST00000477531 NFRKBQ6P4R8 1299 aa18.2■□□□□ 0.5
CLDN11-204ENST00000477531 KCNV1Q6PIU1 500 aa18.2■□□□□ 0.5
CLDN11-204ENST00000477531 ZNF654Q8IZM8 581 aa18.2■□□□□ 0.5
CLDN11-204ENST00000477531 AFG1LQ8WV93 481 aa18.2■□□□□ 0.5
CLDN11-204ENST00000477531 LZTS2Q9BRK4 669 aa18.2■□□□□ 0.5
CLDN11-204ENST00000477531 NOC4LQ9BVI4 516 aaKnown RBP18.2■□□□□ 0.5
CLDN11-204ENST00000477531 SEMA6BQ9H3T3 888 aa18.2■□□□□ 0.5
CLDN11-204ENST00000477531 COL6A3P12111 3177 aa18.19■□□□□ 0.5
CLDN11-204ENST00000477531 TMEM265A0A087WTH1 108 aa18.19■□□□□ 0.5
CLDN11-204ENST00000477531 OPLAHO14841 1288 aa18.19■□□□□ 0.5
CLDN11-204ENST00000477531 FGBP02675 491 aa18.19■□□□□ 0.5
CLDN11-204ENST00000477531 CASTP20810 708 aaKnown RBP18.19■□□□□ 0.5
CLDN11-204ENST00000477531 HOXA13P31271 388 aaPredicted RBP18.19■□□□□ 0.5
CLDN11-204ENST00000477531 CCL23P55773 120 aa18.19■□□□□ 0.5
CLDN11-204ENST00000477531 CHMP4BP1P59074 171 aa18.19■□□□□ 0.5
CLDN11-204ENST00000477531 PTPN11Q06124 597 aaPredicted RBP18.19■□□□□ 0.5
CLDN11-204ENST00000477531 CREB3L3Q68CJ9 461 aa18.19■□□□□ 0.5
CLDN11-204ENST00000477531 ZNF365Q70YC5 407 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms