RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 SLITRK5O94991 958 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 SLU7O95391 586 aaKnown RBP5.49□□□□□ -1.53
PTCD3-212ENST00000477520 TNNT1P13805 278 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 MX1P20591 662 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 ARHGAP4P98171 946 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 JAKMIP3Q5VZ66 844 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 MCTP2Q6DN12 878 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 PI16Q6UXB8 463 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 ARMCX6Q7L4S7 300 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 AEBP1Q8IUX7 1158 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 ABHD4Q8TB40 342 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 GRIN3AQ8TCU5 1115 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 GPT2Q8TD30 523 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 CCDC97Q96F63 343 aaPredicted RBP5.49□□□□□ -1.53
PTCD3-212ENST00000477520 ACSBG1Q96GR2 724 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 FAM210AQ96ND0 272 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 TESK2Q96S53 571 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 KIF2CQ99661 725 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 CXorf56Q9H5V9 222 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 PARD6AQ9NPB6 346 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 A1CFQ9NQ94 594 aaKnown RBP5.49□□□□□ -1.53
PTCD3-212ENST00000477520 ST14Q9Y5Y6 855 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 IQSEC2Q5JU85 1478 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 STRCP1A6NGW2 1772 aa5.49□□□□□ -1.53
PTCD3-212ENST00000477520 PTPRCP08575 1304 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 LTBP4Q8N2S1 1624 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 ADGRB2O60241 1585 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 A0A0G2JLL6 359 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-212ENST00000477520 TMCO5BA8MYB1 307 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 FAM155AB1AL88 458 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-212ENST00000477520 SGSM2O43147 1006 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 NRDCO43847 1150 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 TOM1O60784 492 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 TUBBP07437 444 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 H2AFXP16104 143 aaPredicted RBP5.48□□□□□ -1.53
PTCD3-212ENST00000477520 NME2P22392 152 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 KCNJ6P48051 423 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 ZSCAN26Q16670 478 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 ZBTB37Q5TC79 503 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 LEKR1Q6ZMV7 388 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 SRLQ86TD4 932 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 EFCAB13Q8IY85 973 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 ANKRD20A12PQ8NF67 263 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 TBC1D22AQ8WUA7 517 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 KCNN1Q92952 543 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 CDK19Q9BWU1 502 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 NIF3L1Q9GZT8 377 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 DNAJC25Q9H1X3 360 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 TERF2IPQ9NYB0 399 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 ANKARQ7Z5J8 1434 aa5.48□□□□□ -1.53
PTCD3-212ENST00000477520 WDR33Q9C0J8 1336 aaKnown RBP5.48□□□□□ -1.53
PTCD3-212ENST00000477520 CDC42BPGQ6DT37 1551 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 POLR3AO14802 1390 aaPredicted RBP5.47□□□□□ -1.53
PTCD3-212ENST00000477520 PLEKHG2Q9H7P9 1386 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 DNAJC25-GNG10A0A024R161 153 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 H3BRB1 525 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 GOLIM4O00461 696 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 BRD1O95696 1058 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 CCDC192P0DO97 292 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 MAP2K2P36507 400 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 UBE2HP62256 183 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 IRX1P78414 480 aaPredicted RBP5.47□□□□□ -1.53
PTCD3-212ENST00000477520 PTPN14Q15678 1187 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 RALGPS1Q5JS13 557 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 INTS3Q68E01 1043 aaKnown RBP5.47□□□□□ -1.53
PTCD3-212ENST00000477520 TMCO3Q6UWJ1 677 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 MMS22LQ6ZRQ5 1243 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 TTC6Q86TZ1 520 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 CHD1LQ86WJ1 897 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 ERC1Q8IUD2 1116 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 MFSD4AQ8N468 514 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 PSMD1Q99460 953 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 PAIP2Q9BPZ3 127 aaKnown RBP5.47□□□□□ -1.53
PTCD3-212ENST00000477520 TUT1Q9H6E5 874 aaKnown RBP5.47□□□□□ -1.53
PTCD3-212ENST00000477520 TTC12Q9H892 705 aaPredicted RBP5.47□□□□□ -1.53
PTCD3-212ENST00000477520 CBX8Q9HC52 389 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 SLAMF8Q9P0V8 285 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 CAPN6Q9Y6Q1 641 aa5.47□□□□□ -1.53
PTCD3-212ENST00000477520 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.47□□□□□ -1.53
PTCD3-212ENST00000477520 XIRP1Q702N8 1843 aaKnown RBP5.46□□□□□ -1.53
PTCD3-212ENST00000477520 NALCNQ8IZF0 1738 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 ERICH4A6NGS2 130 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 A6NNZ2 444 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 FANCGO15287 622 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 NDUFB5O43674 189 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 FOXD2O60548 495 aaPredicted RBP5.46□□□□□ -1.54
PTCD3-212ENST00000477520 IGSF3O75054 1194 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 EIF3JO75822 258 aaKnown RBP5.46□□□□□ -1.54
PTCD3-212ENST00000477520 BMP7P18075 431 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 ACTN2P35609 894 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 EIF5P55010 431 aaKnown RBP5.46□□□□□ -1.54
PTCD3-212ENST00000477520 ANAPC15P60006 121 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 KRTAP10-2P60368 255 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 RBM6P78332 1123 aaKnown RBP5.46□□□□□ -1.54
PTCD3-212ENST00000477520 CUL4AQ13619 759 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 TUBB8Q3ZCM7 444 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 LRCH2Q5VUJ6 765 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 NBPF6Q5VWK0 638 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 KRBA2Q6ZNG9 492 aa5.46□□□□□ -1.54
PTCD3-212ENST00000477520 C22orf34Q6ZV56 151 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms