RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 FDX1P10109 184 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 BMP3P12645 472 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 ERCC5P28715 1186 aaPredicted RBP7.55□□□□□ -1.2
LDB3-206ENST00000477489 GGCXP38435 758 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 PPP1R2P41236 205 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 SARSP49591 514 aaKnown RBP7.55□□□□□ -1.2
LDB3-206ENST00000477489 CLK2P49760 499 aaKnown RBP7.55□□□□□ -1.2
LDB3-206ENST00000477489 USP11P51784 963 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 MDM2Q00987 491 aaPredicted RBP7.55□□□□□ -1.2
LDB3-206ENST00000477489 KLRC3Q07444 240 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 TCP10Q12799 353 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 POSTNQ15063 836 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 ZNF174Q15697 407 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 CCDC96Q2M329 555 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 LONRF3Q496Y0 759 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 EARS2Q5JPH6 523 aaKnown RBP7.55□□□□□ -1.2
LDB3-206ENST00000477489 FAM160B2Q86V87 743 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 ADGRF4Q8IZF3 695 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 C4orf32Q8N8J7 132 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 GPKOWQ92917 476 aaPredicted RBP eCLIP7.55□□□□□ -1.2
LDB3-206ENST00000477489 SMARCE1Q969G3 411 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 AMNQ9BXJ7 453 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 MAF1Q9H063 256 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 DNAJC25Q9H1X3 360 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 MYOZ2Q9NPC6 264 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 RMND1Q9NWS8 449 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 ZBTB21Q9ULJ3 1066 aa7.55□□□□□ -1.2
LDB3-206ENST00000477489 PIK3CDO00329 1044 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 WNT10BO00744 389 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 FOXN1O15353 648 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 POLR2DO15514 142 aaKnown RBP7.54□□□□□ -1.2
LDB3-206ENST00000477489 NEMFO60524 1076 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 NDUFB10O96000 172 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 OR52Z1P0C646 297 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 MSNP26038 577 aaKnown RBP7.54□□□□□ -1.2
LDB3-206ENST00000477489 CAP2P40123 477 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 PDIA5Q14554 519 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 SEPT2Q15019 361 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 SYDE2Q5VT97 1194 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 DCAF15Q66K64 600 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 PLA2G4DQ86XP0 818 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 HOMER1Q86YM7 354 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 APOBEC3FQ8IUX4 373 aaKnown RBP7.54□□□□□ -1.2
LDB3-206ENST00000477489 SMC1BQ8NDV3 1235 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 CHURC1Q8WUH1 139 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 LPAR1Q92633 364 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 SYMPKQ92797 1274 aaKnown RBP7.54□□□□□ -1.2
LDB3-206ENST00000477489 ABHD8Q96I13 439 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 CLIC6Q96NY7 704 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 TMUB1Q9BVT8 246 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 LRRC27Q9C0I9 530 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 DEFB129Q9H1M3 183 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 PSTPIP2Q9H939 334 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 PRDM10Q9NQV6 1147 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 PGAP2Q9UHJ9 254 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 ZKSCAN5Q9Y2L8 839 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 RABGAP1Q9Y3P9 1069 aa7.54□□□□□ -1.2
LDB3-206ENST00000477489 FRMPD2Q68DX3 1309 aaPredicted RBP7.53□□□□□ -1.2
LDB3-206ENST00000477489 CYP3A7-CYP3A51PA0A087WV96 503 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 VWA3AA6NCI4 1184 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 TCP10L2B9ZVM9 353 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 TBX3O15119 743 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 CBFA2T2O43439 604 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 TLL1O43897 1013 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 CTNND1O60716 968 aaKnown RBP7.53□□□□□ -1.2
LDB3-206ENST00000477489 GH2P01242 217 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 PTMAP06454 111 aaKnown RBP7.53□□□□□ -1.2
LDB3-206ENST00000477489 ATP2B1P20020 1258 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 CYP3A7P24462 503 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 MCM7P33993 719 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 CLCN1P35523 988 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 UBA7P41226 1012 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 STAT2P52630 851 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 CACNB3P54284 484 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 AMPD3Q01432 767 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 MYL5Q02045 173 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 MORC3Q14149 939 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 CDC37Q16543 378 aaPredicted RBP7.53□□□□□ -1.2
LDB3-206ENST00000477489 INF2Q27J81 1249 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 TMEM266Q2M3C6 531 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 TPRNQ4KMQ1 711 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 LUZP1Q86V48 1076 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 SIAH1Q8IUQ4 282 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 DHX40Q8IX18 779 aaKnown RBP7.53□□□□□ -1.2
LDB3-206ENST00000477489 ENOX1Q8TC92 643 aaKnown RBP7.53□□□□□ -1.2
LDB3-206ENST00000477489 CCDC47Q96A33 483 aaKnown RBP7.53□□□□□ -1.2
LDB3-206ENST00000477489 MBOAT7Q96N66 472 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 UBA5Q9GZZ9 404 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 VCPKMTQ9H867 229 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 EHMT1Q9H9B1 1298 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 RRAGCQ9HB90 399 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 GPCPD1Q9NPB8 672 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 MAP3K20Q9NYL2 800 aaKnown RBP7.53□□□□□ -1.2
LDB3-206ENST00000477489 IMPACTQ9P2X3 320 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 STK17AQ9UEE5 414 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 SERTAD1Q9UHV2 236 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 FEM1BQ9UK73 627 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 PCDHA5Q9Y5H7 936 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 DOCK1Q14185 1865 aa7.53□□□□□ -1.2
LDB3-206ENST00000477489 PITPNM2Q9BZ72 1349 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms