RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 C20orf194Q5TEA3 1177 aa11.62□□□□□ -0.55
COL4A5-204ENST00000477429 SLC30A10Q6XR72 485 aa11.62□□□□□ -0.55
COL4A5-204ENST00000477429 PRSS33Q8NF86 280 aa11.62□□□□□ -0.55
COL4A5-204ENST00000477429 GDPD5Q8WTR4 605 aa11.62□□□□□ -0.55
COL4A5-204ENST00000477429 APPBP2Q92624 585 aa11.62□□□□□ -0.55
COL4A5-204ENST00000477429 CNTNAP3BQ96NU0 1288 aa11.62□□□□□ -0.55
COL4A5-204ENST00000477429 CNTNAP3Q9BZ76 1288 aa11.62□□□□□ -0.55
COL4A5-204ENST00000477429 TSHZ2Q9NRE2 1034 aa11.62□□□□□ -0.55
COL4A5-204ENST00000477429 ISY1Q9ULR0 285 aaKnown RBP11.62□□□□□ -0.55
COL4A5-204ENST00000477429 MTMR7Q9Y216 660 aa11.62□□□□□ -0.55
COL4A5-204ENST00000477429 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.62□□□□□ -0.55
COL4A5-204ENST00000477429 Q9Y3F1 56 aa11.62□□□□□ -0.55
COL4A5-204ENST00000477429 MAP1BP46821 2468 aaKnown RBP11.62□□□□□ -0.55
COL4A5-204ENST00000477429 ZNF292O60281 2723 aa11.61□□□□□ -0.55
COL4A5-204ENST00000477429 WDR87Q6ZQQ6 2873 aa11.61□□□□□ -0.55
COL4A5-204ENST00000477429 RBM47A0AV96 593 aaKnown RBP11.61□□□□□ -0.55
COL4A5-204ENST00000477429 ARIH2O95376 493 aa11.61□□□□□ -0.55
COL4A5-204ENST00000477429 SLC1A4P43007 532 aa11.61□□□□□ -0.55
COL4A5-204ENST00000477429 TDO2P48775 406 aa11.61□□□□□ -0.55
COL4A5-204ENST00000477429 ALDH5A1P51649 535 aaPredicted RBP11.61□□□□□ -0.55
COL4A5-204ENST00000477429 DEFB103AP81534 67 aa11.61□□□□□ -0.55
COL4A5-204ENST00000477429 CTDSPL2Q05D32 466 aa11.61□□□□□ -0.55
COL4A5-204ENST00000477429 OTUD7AQ8TE49 926 aaPredicted RBP11.61□□□□□ -0.55
COL4A5-204ENST00000477429 CLEC4DQ8WXI8 215 aa11.61□□□□□ -0.55
COL4A5-204ENST00000477429 DHX38Q92620 1227 aaKnown RBP11.61□□□□□ -0.55
COL4A5-204ENST00000477429 HLA-CQ95604 372 aa11.61□□□□□ -0.55
COL4A5-204ENST00000477429 WDR11Q9BZH6 1224 aa11.61□□□□□ -0.55
COL4A5-204ENST00000477429 TSPYL2Q9H2G4 693 aaPredicted RBP11.61□□□□□ -0.55
COL4A5-204ENST00000477429 VTA1Q9NP79 307 aa11.61□□□□□ -0.55
COL4A5-204ENST00000477429 SCN10AQ9Y5Y9 1956 aa11.61□□□□□ -0.55
COL4A5-204ENST00000477429 FAM186AA6NE01 2351 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 CACNA1HO95180 2353 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 PATL2C9JE40 543 aaKnown RBP11.6□□□□□ -0.55
COL4A5-204ENST00000477429 APPP05067 770 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 TSPY3P0CV98 308 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 TSPY8P0CW00 308 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 PPARAQ07869 468 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 IKQ13123 557 aaPredicted RBP11.6□□□□□ -0.55
COL4A5-204ENST00000477429 AAK1Q2M2I8 961 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 TKFCQ3LXA3 575 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 FAM47CQ5HY64 1035 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 RCSD1Q6JBY9 416 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 ZSCAN25Q6NSZ9 544 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 FAM160B2Q86V87 743 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 SPRYD3Q8NCJ5 442 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 LRRCC1Q9C099 1032 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 ECHDC1Q9NTX5 307 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 CCPG1Q9ULG6 757 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 SYNPO2Q9UMS6 1093 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 DNAH14Q0VDD8 3507 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 USP24Q9UPU5 2620 aa11.6□□□□□ -0.55
COL4A5-204ENST00000477429 ZEB2O60315 1214 aa11.59□□□□□ -0.55
COL4A5-204ENST00000477429 PLA2G6O60733 806 aa11.59□□□□□ -0.55
COL4A5-204ENST00000477429 HMMRO75330 724 aa11.59□□□□□ -0.55
COL4A5-204ENST00000477429 NOVP48745 357 aa11.59□□□□□ -0.55
COL4A5-204ENST00000477429 VPS53Q5VIR6 699 aa11.59□□□□□ -0.55
COL4A5-204ENST00000477429 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
COL4A5-204ENST00000477429 OR6J1Q8NGC5 347 aa11.59□□□□□ -0.55
COL4A5-204ENST00000477429 CHURC1Q8WUH1 139 aa11.59□□□□□ -0.55
COL4A5-204ENST00000477429 WNT8BQ93098 351 aa11.59□□□□□ -0.55
COL4A5-204ENST00000477429 SLC9A7Q96T83 725 aa11.59□□□□□ -0.55
COL4A5-204ENST00000477429 MTG1Q9BT17 334 aaPredicted RBP11.59□□□□□ -0.55
COL4A5-204ENST00000477429 FTOQ9C0B1 505 aaKnown RBP eCLIP11.59□□□□□ -0.55
COL4A5-204ENST00000477429 RANBP17Q9H2T7 1088 aaKnown RBP11.59□□□□□ -0.55
COL4A5-204ENST00000477429 MTUS1Q9ULD2 1270 aa11.59□□□□□ -0.55
COL4A5-204ENST00000477429 COG5Q9UP83 839 aa11.59□□□□□ -0.55
COL4A5-204ENST00000477429 TANC1Q9C0D5 1861 aa11.59□□□□□ -0.55
COL4A5-204ENST00000477429 FRMPD2Q68DX3 1309 aaPredicted RBP11.59□□□□□ -0.55
COL4A5-204ENST00000477429 MAST4O15021 2626 aa11.58□□□□□ -0.55
COL4A5-204ENST00000477429 GTPBP6O43824 516 aaPredicted RBP11.58□□□□□ -0.56
COL4A5-204ENST00000477429 NBNO60934 754 aa11.58□□□□□ -0.56
COL4A5-204ENST00000477429 ICAM1P05362 532 aa11.58□□□□□ -0.56
COL4A5-204ENST00000477429 PFKMP08237 780 aa11.58□□□□□ -0.56
COL4A5-204ENST00000477429 FDX1P10109 184 aa11.58□□□□□ -0.56
COL4A5-204ENST00000477429 WDR5P61964 334 aaKnown RBP11.58□□□□□ -0.56
COL4A5-204ENST00000477429 GDF6Q6KF10 455 aaPredicted RBP11.58□□□□□ -0.56
COL4A5-204ENST00000477429 TRAF7Q6Q0C0 670 aa11.58□□□□□ -0.56
COL4A5-204ENST00000477429 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.58□□□□□ -0.56
COL4A5-204ENST00000477429 PHOSPHO2Q8TCD6 241 aa11.58□□□□□ -0.56
COL4A5-204ENST00000477429 TBC1D5Q92609 795 aa11.58□□□□□ -0.56
COL4A5-204ENST00000477429 KAT2BQ92831 832 aa11.58□□□□□ -0.56
COL4A5-204ENST00000477429 SUGCTQ9HAC7 445 aa11.58□□□□□ -0.56
COL4A5-204ENST00000477429 POLR3EQ9NVU0 708 aa11.58□□□□□ -0.56
COL4A5-204ENST00000477429 DDX19BQ9UMR2 479 aa11.58□□□□□ -0.56
COL4A5-204ENST00000477429 STX8Q9UNK0 236 aa11.58□□□□□ -0.56
COL4A5-204ENST00000477429 DMXL1Q9Y485 3027 aa11.58□□□□□ -0.56
COL4A5-204ENST00000477429 GVINP1Q7Z2Y8 2422 aa11.57□□□□□ -0.56
COL4A5-204ENST00000477429 DMDP11532 3685 aa11.57□□□□□ -0.56
COL4A5-204ENST00000477429 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-204ENST00000477429 A6NJR5 290 aa11.57□□□□□ -0.56
COL4A5-204ENST00000477429 SUPT20HL2P0C7V6 817 aa11.57□□□□□ -0.56
COL4A5-204ENST00000477429 IL9P15248 144 aa11.57□□□□□ -0.56
COL4A5-204ENST00000477429 EDNRBP24530 442 aa11.57□□□□□ -0.56
COL4A5-204ENST00000477429 CALML3P27482 149 aa11.57□□□□□ -0.56
COL4A5-204ENST00000477429 CHMP4BP1P59074 171 aa11.57□□□□□ -0.56
COL4A5-204ENST00000477429 HIC1Q14526 733 aa11.57□□□□□ -0.56
COL4A5-204ENST00000477429 MBTPS1Q14703 1052 aa11.57□□□□□ -0.56
COL4A5-204ENST00000477429 CSPP1Q1MSJ5 1256 aa11.57□□□□□ -0.56
COL4A5-204ENST00000477429 SEZ6LQ9BYH1 1024 aa11.57□□□□□ -0.56
COL4A5-204ENST00000477429 OSBPL7Q9BZF2 842 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms