RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 PPP1R12AO14974 1030 aaPredicted RBP20.24■□□□□ 0.83
VARS2-209ENST00000477288 GPC4O75487 556 aa20.24■□□□□ 0.83
VARS2-209ENST00000477288 WHAMMP3Q1A5X7 153 aa20.24■□□□□ 0.83
VARS2-209ENST00000477288 FAM26FQ5R3K3 315 aa20.24■□□□□ 0.83
VARS2-209ENST00000477288 KIAA1841Q6NSI8 718 aa20.24■□□□□ 0.83
VARS2-209ENST00000477288 DBNDD1Q9H9R9 158 aa20.24■□□□□ 0.83
VARS2-209ENST00000477288 METTL14Q9HCE5 456 aaKnown RBP20.24■□□□□ 0.83
VARS2-209ENST00000477288 LOC102724428A0A0B4J2F2 783 aa20.24■□□□□ 0.83
VARS2-209ENST00000477288 SIK1P57059 783 aa20.24■□□□□ 0.83
VARS2-209ENST00000477288 AOC3Q16853 763 aa20.24■□□□□ 0.83
VARS2-209ENST00000477288 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.24■□□□□ 0.83
VARS2-209ENST00000477288 CLIC6Q96NY7 704 aa20.24■□□□□ 0.83
VARS2-209ENST00000477288 AMNQ9BXJ7 453 aa20.24■□□□□ 0.83
VARS2-209ENST00000477288 GDF11O95390 407 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 ASPHQ12797 758 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 MIS18BP1Q6P0N0 1132 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 BBS5Q8N3I7 341 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 MICAL1Q8TDZ2 1067 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 CDKL2Q92772 493 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 MAP3K15Q6ZN16 1313 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 PHEXP78562 749 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 ZFYVE16Q7Z3T8 1539 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 GOLGA8KD6RF30 607 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 SGK1O00141 431 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 PTK2Q05397 1052 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 KIAA1468Q9P260 1216 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 GTPBP6O43824 516 aaPredicted RBP20.23■□□□□ 0.83
VARS2-209ENST00000477288 USP14P54578 494 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 SYMPKQ92797 1274 aaKnown RBP20.23■□□□□ 0.83
VARS2-209ENST00000477288 XAB2Q9HCS7 855 aaKnown RBP20.23■□□□□ 0.83
VARS2-209ENST00000477288 TTC4O95801 387 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 FOSP01100 380 aaPredicted RBP20.23■□□□□ 0.83
VARS2-209ENST00000477288 ZSCAN20P17040 1043 aaPredicted RBP20.23■□□□□ 0.83
VARS2-209ENST00000477288 PDE1BQ01064 536 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 ARMC9Q7Z3E5 817 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 ATP6V0A1Q93050 837 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 Q9H521 79 aa20.23■□□□□ 0.83
VARS2-209ENST00000477288 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.23■□□□□ 0.83
VARS2-209ENST00000477288 COBLO75128 1261 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 FGAP02671 866 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 MFAP3P55082 362 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 HP1BP3Q5SSJ5 553 aaPredicted RBP20.22■□□□□ 0.83
VARS2-209ENST00000477288 LRRC8CQ8TDW0 803 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 KIAA0232Q92628 1395 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 HIP1RO75146 1068 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 PHKA1P46020 1223 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 MYRIPQ8NFW9 859 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 FAM149B1Q96BN6 582 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 BTBD18B2RXH4 712 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 SMAP1Q8IYB5 467 aaPredicted RBP20.22■□□□□ 0.83
VARS2-209ENST00000477288 FNDC3AQ9Y2H6 1198 aaKnown RBP20.22■□□□□ 0.83
VARS2-209ENST00000477288 TARBP1Q13395 1621 aaKnown RBP20.22■□□□□ 0.83
VARS2-209ENST00000477288 IQCB1Q15051 598 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 RAB44Q7Z6P3 723 aaPredicted RBP20.22■□□□□ 0.83
VARS2-209ENST00000477288 MAP7D3Q8IWC1 876 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 SPDYE1Q8NFV5 336 aaPredicted RBP20.22■□□□□ 0.83
VARS2-209ENST00000477288 NLRP7Q8WX94 980 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 SLC7A3Q8WY07 619 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 UBN1Q9NPG3 1134 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 TRPC5Q9UL62 973 aaPredicted RBP20.22■□□□□ 0.83
VARS2-209ENST00000477288 BLMP54132 1417 aaPredicted RBP20.22■□□□□ 0.83
VARS2-209ENST00000477288 PTGDRQ13258 359 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 SUPT20HL1Q3ZLR7 823 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 TTC19Q6DKK2 380 aaPredicted RBP20.22■□□□□ 0.83
VARS2-209ENST00000477288 PI4K2BQ8TCG2 481 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 RPGRIP1Q96KN7 1286 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 PPP1R16BQ96T49 567 aa20.22■□□□□ 0.83
VARS2-209ENST00000477288 SART1O43290 800 aaKnown RBP20.21■□□□□ 0.83
VARS2-209ENST00000477288 TSC1Q92574 1164 aa20.21■□□□□ 0.83
VARS2-209ENST00000477288 EAF2Q96CJ1 260 aaPredicted RBP20.21■□□□□ 0.83
VARS2-209ENST00000477288 USP28Q96RU2 1077 aa20.21■□□□□ 0.83
VARS2-209ENST00000477288 TM6SF1Q9BZW5 370 aa20.21■□□□□ 0.83
VARS2-209ENST00000477288 ABT1Q9ULW3 272 aaKnown RBP20.21■□□□□ 0.83
VARS2-209ENST00000477288 YEATS2Q9ULM3 1422 aa20.21■□□□□ 0.83
VARS2-209ENST00000477288 PLXNC1O60486 1568 aa20.21■□□□□ 0.83
VARS2-209ENST00000477288 EXOC3L4Q17RC7 722 aa20.21■□□□□ 0.83
VARS2-209ENST00000477288 FAN1Q9Y2M0 1017 aa20.21■□□□□ 0.83
VARS2-209ENST00000477288 FIS1Q9Y3D6 152 aa20.21■□□□□ 0.83
VARS2-209ENST00000477288 PSDA5PKW4 1024 aaPredicted RBP20.21■□□□□ 0.83
VARS2-209ENST00000477288 SEMA3EO15041 775 aa20.21■□□□□ 0.83
VARS2-209ENST00000477288 RNF217Q8TC41 542 aa20.21■□□□□ 0.83
VARS2-209ENST00000477288 RCN2Q14257 317 aa20.21■□□□□ 0.83
VARS2-209ENST00000477288 MESDQ14696 234 aa20.21■□□□□ 0.83
VARS2-209ENST00000477288 NT5C1BQ96P26 610 aa20.21■□□□□ 0.83
VARS2-209ENST00000477288 GNGT2O14610 69 aa20.2■□□□□ 0.83
VARS2-209ENST00000477288 PFKFB2O60825 505 aa20.2■□□□□ 0.83
VARS2-209ENST00000477288 KMT5AQ9NQR1 393 aa20.2■□□□□ 0.83
VARS2-209ENST00000477288 H2AFZP0C0S5 128 aa20.2■□□□□ 0.82
VARS2-209ENST00000477288 H2AFVQ71UI9 128 aa20.2■□□□□ 0.82
VARS2-209ENST00000477288 EEPD1Q7L9B9 569 aa20.2■□□□□ 0.82
VARS2-209ENST00000477288 PGBD1Q96JS3 809 aa20.2■□□□□ 0.82
VARS2-209ENST00000477288 ADD3Q9UEY8 706 aaKnown RBP20.2■□□□□ 0.82
VARS2-209ENST00000477288 INHBAP08476 426 aa20.2■□□□□ 0.82
VARS2-209ENST00000477288 CCND2P30279 289 aa20.2■□□□□ 0.82
VARS2-209ENST00000477288 SLC16A2P36021 539 aa20.2■□□□□ 0.82
VARS2-209ENST00000477288 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.2■□□□□ 0.82
VARS2-209ENST00000477288 STAG1Q8WVM7 1258 aa20.2■□□□□ 0.82
VARS2-209ENST00000477288 NVLO15381 856 aaKnown RBP20.2■□□□□ 0.82
VARS2-209ENST00000477288 SRGAP2BP0DMP2 458 aa20.2■□□□□ 0.82
VARS2-209ENST00000477288 ADORA1P30542 326 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms