RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 SH3RF1Q7Z6J0 888 aa24.52■■□□□ 1.52
LIME1-204ENST00000476183 LZTS2Q9BRK4 669 aa24.52■■□□□ 1.52
LIME1-204ENST00000476183 PDLIM7Q9NR12 457 aa24.52■■□□□ 1.52
LIME1-204ENST00000476183 SNX14Q9Y5W7 946 aa24.52■■□□□ 1.52
LIME1-204ENST00000476183 SZT2Q5T011 3432 aa24.51■■□□□ 1.51
LIME1-204ENST00000476183 B4DLN1 442 aa24.51■■□□□ 1.51
LIME1-204ENST00000476183 CALM1P0DP23 149 aa24.51■■□□□ 1.51
LIME1-204ENST00000476183 CALM2P0DP24 149 aa24.51■■□□□ 1.51
LIME1-204ENST00000476183 CALM3P0DP25 149 aa24.51■■□□□ 1.51
LIME1-204ENST00000476183 CPA1P15085 419 aa24.51■■□□□ 1.51
LIME1-204ENST00000476183 EIF2AK2P19525 551 aaKnown RBP24.51■■□□□ 1.51
LIME1-204ENST00000476183 GNAQP50148 359 aa24.51■■□□□ 1.51
LIME1-204ENST00000476183 MRPL12P52815 198 aaKnown RBP24.51■■□□□ 1.51
LIME1-204ENST00000476183 MDM2Q00987 491 aaPredicted RBP24.51■■□□□ 1.51
LIME1-204ENST00000476183 MICU3Q86XE3 530 aa24.51■■□□□ 1.51
LIME1-204ENST00000476183 GLT1D1Q96MS3 346 aa24.51■■□□□ 1.51
LIME1-204ENST00000476183 PXMP2Q9NR77 195 aa24.51■■□□□ 1.51
LIME1-204ENST00000476183 BRPF3Q9ULD4 1205 aa24.51■■□□□ 1.51
LIME1-204ENST00000476183 ELP1O95163 1332 aa24.51■■□□□ 1.51
LIME1-204ENST00000476183 LTBP2Q14767 1821 aa24.51■■□□□ 1.51
LIME1-204ENST00000476183 TRIM43BA6NCK2 446 aa24.5■■□□□ 1.51
LIME1-204ENST00000476183 PQBP1O60828 265 aaKnown RBP24.5■■□□□ 1.51
LIME1-204ENST00000476183 ARIH2O95376 493 aa24.5■■□□□ 1.51
LIME1-204ENST00000476183 TRAF1Q13077 416 aa24.5■■□□□ 1.51
LIME1-204ENST00000476183 ARHGEF16Q5VV41 709 aa24.5■■□□□ 1.51
LIME1-204ENST00000476183 APOA5Q6Q788 366 aa24.5■■□□□ 1.51
LIME1-204ENST00000476183 CXCL17Q6UXB2 119 aa24.5■■□□□ 1.51
LIME1-204ENST00000476183 FANCBQ8NB91 859 aa24.5■■□□□ 1.51
LIME1-204ENST00000476183 SCFD2Q8WU76 684 aa24.5■■□□□ 1.51
LIME1-204ENST00000476183 COPS5Q92905 334 aa24.5■■□□□ 1.51
LIME1-204ENST00000476183 TRIM43Q96BQ3 446 aaPredicted RBP24.5■■□□□ 1.51
LIME1-204ENST00000476183 RRP36Q96EU6 259 aaKnown RBP24.5■■□□□ 1.51
LIME1-204ENST00000476183 IWS1Q96ST2 819 aa24.5■■□□□ 1.51
LIME1-204ENST00000476183 PRDM5Q9NQX1 630 aaPredicted RBP24.5■■□□□ 1.51
LIME1-204ENST00000476183 REC8O95072 547 aa24.49■■□□□ 1.51
LIME1-204ENST00000476183 TMTC3Q6ZXV5 915 aa24.49■■□□□ 1.51
LIME1-204ENST00000476183 ANKRD33Q7Z3H0 272 aa24.49■■□□□ 1.51
LIME1-204ENST00000476183 SAMD3Q8N6K7 520 aa24.49■■□□□ 1.51
LIME1-204ENST00000476183 MAP3K20Q9NYL2 800 aaKnown RBP24.49■■□□□ 1.51
LIME1-204ENST00000476183 PRKAG2Q9UGJ0 569 aa24.49■■□□□ 1.51
LIME1-204ENST00000476183 KIAA1217Q5T5P2 1943 aa24.49■■□□□ 1.51
LIME1-204ENST00000476183 GCOM1H8Y6P7 765 aaPredicted RBP24.48■■□□□ 1.51
LIME1-204ENST00000476183 NR3C2P08235 984 aa24.48■■□□□ 1.51
LIME1-204ENST00000476183 POLR2MP0CAP2 368 aa24.48■■□□□ 1.51
LIME1-204ENST00000476183 CDK7P50613 346 aa24.48■■□□□ 1.51
LIME1-204ENST00000476183 PPP2R5BQ15173 497 aa24.48■■□□□ 1.51
LIME1-204ENST00000476183 STXBP2Q15833 593 aa24.48■■□□□ 1.51
LIME1-204ENST00000476183 VTI1AQ96AJ9 217 aa24.48■■□□□ 1.51
LIME1-204ENST00000476183 JAKMIP1Q96N16 626 aaKnown RBP24.48■■□□□ 1.51
LIME1-204ENST00000476183 A0A0U1RQG5 324 aaPredicted RBP24.47■■□□□ 1.51
LIME1-204ENST00000476183 A0A1W2PPC1 479 aa24.47■■□□□ 1.51
LIME1-204ENST00000476183 hCG_1642624A0A1W2PR95 340 aa24.47■■□□□ 1.51
LIME1-204ENST00000476183 SLC34A2O95436 690 aa24.47■■□□□ 1.51
LIME1-204ENST00000476183 HMGB1P09429 215 aaKnown RBP24.47■■□□□ 1.51
LIME1-204ENST00000476183 CLTBP09497 229 aa24.47■■□□□ 1.51
LIME1-204ENST00000476183 TXNP10599 105 aaKnown RBP24.47■■□□□ 1.51
LIME1-204ENST00000476183 ITGB8P26012 769 aa24.47■■□□□ 1.51
LIME1-204ENST00000476183 FAAP100Q0VG06 881 aa24.47■■□□□ 1.51
LIME1-204ENST00000476183 CCDC62Q6P9F0 684 aa24.47■■□□□ 1.51
LIME1-204ENST00000476183 SEPT14Q6ZU15 432 aa24.47■■□□□ 1.51
LIME1-204ENST00000476183 CCDC82Q8N4S0 544 aa24.47■■□□□ 1.51
LIME1-204ENST00000476183 OR6J1Q8NGC5 347 aa24.47■■□□□ 1.51
LIME1-204ENST00000476183 TOX2Q96NM4 488 aa24.47■■□□□ 1.51
LIME1-204ENST00000476183 PDCD2LQ9BRP1 358 aa24.47■■□□□ 1.51
LIME1-204ENST00000476183 UBE2OQ9C0C9 1292 aaKnown RBP24.47■■□□□ 1.51
LIME1-204ENST00000476183 GRIN2DO15399 1336 aa24.46■■□□□ 1.51
LIME1-204ENST00000476183 ARVCFO00192 962 aa24.46■■□□□ 1.51
LIME1-204ENST00000476183 NKRFO15226 690 aaKnown RBP eCLIP24.46■■□□□ 1.51
LIME1-204ENST00000476183 TTLL4Q14679 1199 aa24.46■■□□□ 1.51
LIME1-204ENST00000476183 SYNE3Q6ZMZ3 975 aa24.46■■□□□ 1.51
LIME1-204ENST00000476183 FCHSD1Q86WN1 690 aa24.46■■□□□ 1.51
LIME1-204ENST00000476183 IL31RAQ8NI17 732 aa24.46■■□□□ 1.51
LIME1-204ENST00000476183 SEC63Q9UGP8 760 aaKnown RBP24.46■■□□□ 1.51
LIME1-204ENST00000476183 ZBTB43O43298 467 aa24.45■■□□□ 1.5
LIME1-204ENST00000476183 ZEB2O60315 1214 aa24.45■■□□□ 1.5
LIME1-204ENST00000476183 EIF3JO75822 258 aaKnown RBP24.45■■□□□ 1.5
LIME1-204ENST00000476183 CABYRO75952 493 aa24.45■■□□□ 1.5
LIME1-204ENST00000476183 LBHD1Q9BQE6 289 aaPredicted RBP24.45■■□□□ 1.5
LIME1-204ENST00000476183 KLF18A0A0U1RQI7 1052 aa24.44■■□□□ 1.5
LIME1-204ENST00000476183 DCDC2CA8MYV0 355 aa24.44■■□□□ 1.5
LIME1-204ENST00000476183 KIAA0355O15063 1070 aa24.44■■□□□ 1.5
LIME1-204ENST00000476183 MYCLP12524 364 aaPredicted RBP24.44■■□□□ 1.5
LIME1-204ENST00000476183 PSMC6P62333 389 aa24.44■■□□□ 1.5
LIME1-204ENST00000476183 PGM5Q15124 567 aa24.44■■□□□ 1.5
LIME1-204ENST00000476183 LY6KQ17RY6 165 aa24.44■■□□□ 1.5
LIME1-204ENST00000476183 Q6ZUG5 572 aa24.44■■□□□ 1.5
LIME1-204ENST00000476183 VSIG10LQ86VR7 867 aa24.44■■□□□ 1.5
LIME1-204ENST00000476183 SLC43A3Q8NBI5 491 aa24.44■■□□□ 1.5
LIME1-204ENST00000476183 BADQ92934 168 aa24.44■■□□□ 1.5
LIME1-204ENST00000476183 USP26Q9BXU7 913 aa24.44■■□□□ 1.5
LIME1-204ENST00000476183 FAM217BQ9NTX9 383 aaPredicted RBP24.44■■□□□ 1.5
LIME1-204ENST00000476183 CNTNAP5Q8WYK1 1306 aa24.43■■□□□ 1.5
LIME1-204ENST00000476183 RGS20O76081 388 aa24.43■■□□□ 1.5
LIME1-204ENST00000476183 FUT2Q10981 343 aa24.43■■□□□ 1.5
LIME1-204ENST00000476183 RTN1Q16799 776 aa24.43■■□□□ 1.5
LIME1-204ENST00000476183 BLOC1S2Q6QNY1 142 aa24.43■■□□□ 1.5
LIME1-204ENST00000476183 FAM126BQ8IXS8 530 aa24.43■■□□□ 1.5
LIME1-204ENST00000476183 TMEM39AQ9NV64 488 aa24.43■■□□□ 1.5
LIME1-204ENST00000476183 RBM28Q9NW13 759 aaKnown RBP24.43■■□□□ 1.5
LIME1-204ENST00000476183 MROH7Q68CQ1 1323 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms