RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 KCNMB3Q9NPA1 279 aa24.41■■□□□ 1.5
CCM2-206ENST00000474617 SAMSN1Q9NSI8 373 aaKnown RBP24.41■■□□□ 1.5
CCM2-206ENST00000474617 CTNND2Q9UQB3 1225 aa24.41■■□□□ 1.5
CCM2-206ENST00000474617 ITIH6Q6UXX5 1313 aa24.41■■□□□ 1.5
CCM2-206ENST00000474617 CYP3A4P08684 503 aa24.4■■□□□ 1.5
CCM2-206ENST00000474617 SLURP2P0DP57 97 aa24.4■■□□□ 1.5
CCM2-206ENST00000474617 CASP1P29466 404 aa24.4■■□□□ 1.5
CCM2-206ENST00000474617 PSMD2Q13200 908 aa24.4■■□□□ 1.5
CCM2-206ENST00000474617 SHROOM1Q2M3G4 852 aaPredicted RBP24.4■■□□□ 1.5
CCM2-206ENST00000474617 ARMCX5Q6P1M9 558 aa24.4■■□□□ 1.5
CCM2-206ENST00000474617 SNX29Q8TEQ0 813 aa24.4■■□□□ 1.5
CCM2-206ENST00000474617 LARP4BQ92615 738 aaKnown RBP24.4■■□□□ 1.5
CCM2-206ENST00000474617 STAMQ92783 540 aa24.4■■□□□ 1.5
CCM2-206ENST00000474617 RANBP17Q9H2T7 1088 aaKnown RBP24.4■■□□□ 1.5
CCM2-206ENST00000474617 THAP9Q9H5L6 903 aa24.4■■□□□ 1.5
CCM2-206ENST00000474617 RABGAP1Q9Y3P9 1069 aa24.4■■□□□ 1.5
CCM2-206ENST00000474617 MYH7BA7E2Y1 1941 aa24.4■■□□□ 1.5
CCM2-206ENST00000474617 EEF1GP26641 437 aaKnown RBP24.4■■□□□ 1.5
CCM2-206ENST00000474617 JAG1P78504 1218 aa24.4■■□□□ 1.5
CCM2-206ENST00000474617 ARHGAP4P98171 946 aa24.4■■□□□ 1.5
CCM2-206ENST00000474617 GRB10Q13322 594 aa24.4■■□□□ 1.5
CCM2-206ENST00000474617 HAUS3Q68CZ6 603 aa24.4■■□□□ 1.5
CCM2-206ENST00000474617 LPAR1Q92633 364 aa24.4■■□□□ 1.5
CCM2-206ENST00000474617 TMEM39BQ9GZU3 492 aa24.4■■□□□ 1.5
CCM2-206ENST00000474617 ADD3Q9UEY8 706 aaKnown RBP24.4■■□□□ 1.5
CCM2-206ENST00000474617 MRPL11Q9Y3B7 192 aaKnown RBP24.4■■□□□ 1.5
CCM2-206ENST00000474617 R3HCC1Q9Y3T6 440 aaKnown RBP24.4■■□□□ 1.5
CCM2-206ENST00000474617 NFKBIEO00221 500 aa24.39■■□□□ 1.49
CCM2-206ENST00000474617 PRCPP42785 496 aa24.39■■□□□ 1.49
CCM2-206ENST00000474617 TRIM14Q14142 442 aa24.39■■□□□ 1.49
CCM2-206ENST00000474617 UNC13DQ70J99 1090 aa24.39■■□□□ 1.49
CCM2-206ENST00000474617 FAM114A1Q8IWE2 563 aa24.39■■□□□ 1.49
CCM2-206ENST00000474617 SAMD3Q8N6K7 520 aa24.39■■□□□ 1.49
CCM2-206ENST00000474617 ERMNQ8TAM6 284 aa24.39■■□□□ 1.49
CCM2-206ENST00000474617 RAD54LQ92698 747 aa24.39■■□□□ 1.49
CCM2-206ENST00000474617 HAS1Q92839 578 aa24.39■■□□□ 1.49
CCM2-206ENST00000474617 DEFB129Q9H1M3 183 aa24.39■■□□□ 1.49
CCM2-206ENST00000474617 TMX1Q9H3N1 280 aa24.39■■□□□ 1.49
CCM2-206ENST00000474617 ABCB11O95342 1321 aa24.38■■□□□ 1.49
CCM2-206ENST00000474617 USP17L15C9J2P7 530 aa24.38■■□□□ 1.49
CCM2-206ENST00000474617 USP17L13C9JLJ4 530 aa24.38■■□□□ 1.49
CCM2-206ENST00000474617 USP17L11C9JVI0 530 aa24.38■■□□□ 1.49
CCM2-206ENST00000474617 USP17L18D6R9N7 530 aa24.38■■□□□ 1.49
CCM2-206ENST00000474617 USP17L22D6RA61 530 aa24.38■■□□□ 1.49
CCM2-206ENST00000474617 USP17L17D6RBQ6 530 aa24.38■■□□□ 1.49
CCM2-206ENST00000474617 USP17L19D6RCP7 530 aa24.38■■□□□ 1.49
CCM2-206ENST00000474617 USP17L20D6RJB6 530 aa24.38■■□□□ 1.49
CCM2-206ENST00000474617 TPM1P09493 284 aa24.38■■□□□ 1.49
CCM2-206ENST00000474617 ASIC1P78348 528 aa24.38■■□□□ 1.49
CCM2-206ENST00000474617 USP17L24Q0WX57 530 aa24.38■■□□□ 1.49
CCM2-206ENST00000474617 USP17L6PQ6QN14 398 aa24.38■■□□□ 1.49
CCM2-206ENST00000474617 BMP2KQ9NSY1 1161 aaPredicted RBP24.38■■□□□ 1.49
CCM2-206ENST00000474617 INTS13Q9NVM9 706 aa24.38■■□□□ 1.49
CCM2-206ENST00000474617 PAXBP1Q9Y5B6 917 aa24.38■■□□□ 1.49
CCM2-206ENST00000474617 APTXQ7Z2E3 356 aaKnown RBP24.37■■□□□ 1.49
CCM2-206ENST00000474617 CCDC51Q96ER9 411 aa24.37■■□□□ 1.49
CCM2-206ENST00000474617 NUP88Q99567 741 aaPredicted RBP24.37■■□□□ 1.49
CCM2-206ENST00000474617 NAA15Q9BXJ9 866 aaKnown RBP24.37■■□□□ 1.49
CCM2-206ENST00000474617 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.37■■□□□ 1.49
CCM2-206ENST00000474617 FZD9O00144 591 aa24.36■■□□□ 1.49
CCM2-206ENST00000474617 ARHGAP6O43182 974 aa24.36■■□□□ 1.49
CCM2-206ENST00000474617 PDE4DQ08499 809 aa24.36■■□□□ 1.49
CCM2-206ENST00000474617 SMYD4Q8IYR2 804 aaPredicted RBP24.36■■□□□ 1.49
CCM2-206ENST00000474617 CCAR2Q8N163 923 aaKnown RBP24.36■■□□□ 1.49
CCM2-206ENST00000474617 PNMA5Q96PV4 448 aa24.36■■□□□ 1.49
CCM2-206ENST00000474617 STX10O60499 249 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 CTNND1O60716 968 aaKnown RBP24.35■■□□□ 1.49
CCM2-206ENST00000474617 FGFR1OPO95684 399 aaKnown RBP24.35■■□□□ 1.49
CCM2-206ENST00000474617 CCNE1P24864 410 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 ECE1P42892 770 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 STX17P56962 302 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 RASA3Q14644 834 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 TCP11X2Q5H9J9 407 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 ACER1Q8TDN7 264 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 PANX2Q96RD6 677 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 SGIP1Q9BQI5 828 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 BLOC1S4Q9NUP1 217 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 GOLGA6L9A6NEM1 432 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 WDR46O15213 610 aaKnown RBP24.35■■□□□ 1.49
CCM2-206ENST00000474617 FDX1P10109 184 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 PBX1P40424 430 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 ARID5BQ14865 1188 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 NBPF9Q3BBW0 867 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 FAM83BQ5T0W9 1011 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 DCAF15Q66K64 600 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 PPFIBP1Q86W92 1011 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 C17orf53Q8N3J3 647 aaPredicted RBP24.35■■□□□ 1.49
CCM2-206ENST00000474617 MAGEC2Q9UBF1 373 aaPredicted RBP24.35■■□□□ 1.49
CCM2-206ENST00000474617 GDAQ9Y2T3 454 aa24.35■■□□□ 1.49
CCM2-206ENST00000474617 GCOM1H8Y6P7 765 aaPredicted RBP24.34■■□□□ 1.49
CCM2-206ENST00000474617 POLR2MP0CAP2 368 aa24.34■■□□□ 1.49
CCM2-206ENST00000474617 ETNPPLQ8TBG4 499 aa24.34■■□□□ 1.49
CCM2-206ENST00000474617 KIAA1683Q9H0B3 1180 aa24.34■■□□□ 1.49
CCM2-206ENST00000474617 MAP3K20Q9NYL2 800 aaKnown RBP24.34■■□□□ 1.49
CCM2-206ENST00000474617 POTEMA6NI47 508 aa24.33■■□□□ 1.49
CCM2-206ENST00000474617 PHF20L1A8MW92 1017 aa24.33■■□□□ 1.49
CCM2-206ENST00000474617 KCNJ18B7U540 433 aa24.33■■□□□ 1.49
CCM2-206ENST00000474617 KIF20AO95235 890 aa24.33■■□□□ 1.49
CCM2-206ENST00000474617 KCNJ12Q14500 433 aa24.33■■□□□ 1.49
CCM2-206ENST00000474617 PTPN14Q15678 1187 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms