RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 PSMA7O14818 248 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 OPLAHO14841 1288 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 TBX3O15119 743 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 CTIFO43310 598 aaKnown RBP11.01□□□□□ -0.65
USP39-214ENST00000474572 FOSP01100 380 aaPredicted RBP11.01□□□□□ -0.65
USP39-214ENST00000474572 SREBF1P36956 1147 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 PDE4DQ08499 809 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 TRAF1Q13077 416 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 STIM1Q13586 685 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 Q4G0T1 1027 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 HSP90AA4PQ58FG1 418 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 TCP11X2Q5H9J9 407 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 CEP135Q66GS9 1140 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 SV2BQ7L1I2 683 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 OGFOD1Q8N543 542 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 SNX29Q8TEQ0 813 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 LARP4BQ92615 738 aaKnown RBP11.01□□□□□ -0.65
USP39-214ENST00000474572 RAD54LQ92698 747 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 CCDC51Q96ER9 411 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 P2RX7Q99572 595 aaKnown RBP11.01□□□□□ -0.65
USP39-214ENST00000474572 DUSP9Q99956 384 aaKnown RBP11.01□□□□□ -0.65
USP39-214ENST00000474572 NUDT12Q9BQG2 462 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 LRRC27Q9C0I9 530 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.01□□□□□ -0.65
USP39-214ENST00000474572 PRR12Q9ULL5 1215 aa11.01□□□□□ -0.65
USP39-214ENST00000474572 POTEMA6NI47 508 aa11□□□□□ -0.65
USP39-214ENST00000474572 MYMKA6NI61 221 aa11□□□□□ -0.65
USP39-214ENST00000474572 KCNJ18B7U540 433 aa11□□□□□ -0.65
USP39-214ENST00000474572 USP17L15C9J2P7 530 aa11□□□□□ -0.65
USP39-214ENST00000474572 USP17L13C9JLJ4 530 aa11□□□□□ -0.65
USP39-214ENST00000474572 AKR1B15C9JRZ8 316 aaPredicted RBP11□□□□□ -0.65
USP39-214ENST00000474572 USP17L11C9JVI0 530 aa11□□□□□ -0.65
USP39-214ENST00000474572 USP17L18D6R9N7 530 aa11□□□□□ -0.65
USP39-214ENST00000474572 USP17L22D6RA61 530 aa11□□□□□ -0.65
USP39-214ENST00000474572 USP17L17D6RBQ6 530 aa11□□□□□ -0.65
USP39-214ENST00000474572 USP17L19D6RCP7 530 aa11□□□□□ -0.65
USP39-214ENST00000474572 USP17L20D6RJB6 530 aa11□□□□□ -0.65
USP39-214ENST00000474572 CYP3A4P08684 503 aa11□□□□□ -0.65
USP39-214ENST00000474572 EEF1GP26641 437 aaKnown RBP11□□□□□ -0.65
USP39-214ENST00000474572 PMS1P54277 932 aaKnown RBP11□□□□□ -0.65
USP39-214ENST00000474572 ASIC1P78348 528 aa11□□□□□ -0.65
USP39-214ENST00000474572 CXCL9Q07325 125 aa11□□□□□ -0.65
USP39-214ENST00000474572 USP17L24Q0WX57 530 aa11□□□□□ -0.65
USP39-214ENST00000474572 TRIM14Q14142 442 aa11□□□□□ -0.65
USP39-214ENST00000474572 KCNJ12Q14500 433 aa11□□□□□ -0.65
USP39-214ENST00000474572 SYCP1Q15431 976 aa11□□□□□ -0.65
USP39-214ENST00000474572 KIAA1755Q5JYT7 1200 aa11□□□□□ -0.65
USP39-214ENST00000474572 KRT79Q5XKE5 535 aa11□□□□□ -0.65
USP39-214ENST00000474572 USP17L6PQ6QN14 398 aa11□□□□□ -0.65
USP39-214ENST00000474572 REXO1L1PQ8IX06 675 aa11□□□□□ -0.65
USP39-214ENST00000474572 KIAA0895Q8NCT3 520 aa11□□□□□ -0.65
USP39-214ENST00000474572 ETNPPLQ8TBG4 499 aa11□□□□□ -0.65
USP39-214ENST00000474572 P2RX5Q93086 422 aa11□□□□□ -0.65
USP39-214ENST00000474572 PLIN2Q99541 437 aa11□□□□□ -0.65
USP39-214ENST00000474572 NUP88Q99567 741 aaPredicted RBP11□□□□□ -0.65
USP39-214ENST00000474572 BAG1Q99933 345 aaPredicted RBP11□□□□□ -0.65
USP39-214ENST00000474572 NAA15Q9BXJ9 866 aaKnown RBP11□□□□□ -0.65
USP39-214ENST00000474572 DEFB129Q9H1M3 183 aa11□□□□□ -0.65
USP39-214ENST00000474572 RANBP17Q9H2T7 1088 aaKnown RBP11□□□□□ -0.65
USP39-214ENST00000474572 VCPKMTQ9H867 229 aa11□□□□□ -0.65
USP39-214ENST00000474572 EXOC1Q9NV70 894 aa11□□□□□ -0.65
USP39-214ENST00000474572 PIM2Q9P1W9 311 aa11□□□□□ -0.65
USP39-214ENST00000474572 ZBTB12Q9Y330 459 aaPredicted RBP11□□□□□ -0.65
USP39-214ENST00000474572 LTBP3Q9NS15 1303 aa11□□□□□ -0.65
USP39-214ENST00000474572 PARP14Q460N5 1801 aa11□□□□□ -0.65
USP39-214ENST00000474572 DOCK1Q14185 1865 aa11□□□□□ -0.65
USP39-214ENST00000474572 A0A1W2PQC6 194 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 BICDL2A1A5D9 508 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 TRIM49BA6NDI0 452 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 MFAP3LO75121 409 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 GYPCP04921 128 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 CAP2P40123 477 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 ECE1P42892 770 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 STAT2P52630 851 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 ZNF280AP59817 542 aaPredicted RBP10.99□□□□□ -0.65
USP39-214ENST00000474572 ARHGAP4P98171 946 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 SPIRE1Q08AE8 756 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 GOLGA8FQ08AF8 430 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 GOLGA8DPQ0D2H9 430 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 STK4Q13043 487 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 MCM6Q14566 821 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 PTPN21Q16825 1174 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 CIAPIN1Q6FI81 312 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 CENPPQ6IPU0 288 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 KCNK18Q7Z418 384 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 SLFN12Q8IYM2 578 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 ANKRD20A12PQ8NF67 263 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 ZNF507Q8TCN5 953 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 ACER1Q8TDN7 264 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 LENG9Q96B70 501 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 NT5C3AQ9H0P0 336 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 GOPCQ9HD26 462 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 GINM1Q9NU53 330 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 TRMT1Q9NXH9 659 aaKnown RBP10.99□□□□□ -0.65
USP39-214ENST00000474572 PCDHA12Q9UN75 941 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.99□□□□□ -0.65
USP39-214ENST00000474572 ABCB11O95342 1321 aa10.99□□□□□ -0.65
USP39-214ENST00000474572 GOLGA6L9A6NEM1 432 aa10.98□□□□□ -0.65
USP39-214ENST00000474572 LGALS16A8MUM7 142 aa10.98□□□□□ -0.65
USP39-214ENST00000474572 WNT10BO00744 389 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms