RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 DSCC1Q9BVC3 393 aa10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 CPVLQ9H3G5 476 aa10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 VTA1Q9NP79 307 aa10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 SUPT16HQ9Y5B9 1047 aaKnown RBP10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 MROH7Q68CQ1 1323 aa10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 WDR19Q8NEZ3 1342 aa10.3□□□□□ -0.76
TNFRSF9-202ENST00000474475 PTPDC1A2A3K4 754 aa10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 CALML3P27482 149 aa10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 SMAD3P84022 425 aaKnown RBP10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 FSCN1Q16658 493 aaKnown RBP10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 GPATCH4Q5T3I0 446 aaKnown RBP10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 ZNF697Q5TEC3 545 aa10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 RNF207Q6ZRF8 634 aa10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 KIAA1211Q6ZU35 1233 aa10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 SLC43A3Q8NBI5 491 aa10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 PNMA1Q8ND90 353 aa10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 ANKS1AQ92625 1134 aa10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 KHSRPQ92945 711 aaKnown RBP eCLIP10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 RNPC3Q96LT9 517 aaKnown RBP10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 EPAS1Q99814 870 aa10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 UBA5Q9GZZ9 404 aa10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 AP5M1Q9H0R1 490 aa10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 ZSWIM5Q9P217 1185 aa10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 ADD3Q9UEY8 706 aaKnown RBP10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 Q9Y3F1 56 aa10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 GRIN2DO15399 1336 aa10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 CUL9Q8IWT3 2517 aa10.29□□□□□ -0.76
TNFRSF9-202ENST00000474475 LOC102724159A0A0B4J2E5 919 aa10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 CD4P01730 458 aa10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 GSPT1P15170 499 aaKnown RBP10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 NT5C2P49902 561 aa10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 RPS6P62753 249 aaKnown RBP10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 PWP2Q15269 919 aaKnown RBP10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 IMMTQ16891 758 aaKnown RBP10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 USH1GQ495M9 461 aa10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 DUSP28Q4G0W2 176 aa10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 MFSD5Q6N075 450 aa10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 C16orf59Q7L2K0 433 aa10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 IQCA1Q86XH1 822 aa10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 ENAHQ8N8S7 591 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 ZSCAN10Q96SZ4 725 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 PPP1R12CQ9BZL4 782 aa10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 TTYH1Q9H313 450 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 SEMA6BQ9H3T3 888 aa10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 KAT14Q9H8E8 782 aa10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 PNMA2Q9UL42 364 aa10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 TNKSO95271 1327 aa10.28□□□□□ -0.76
TNFRSF9-202ENST00000474475 RBM47A0AV96 593 aaKnown RBP10.27□□□□□ -0.77
TNFRSF9-202ENST00000474475 TLR3O15455 904 aaKnown RBP10.27□□□□□ -0.77
TNFRSF9-202ENST00000474475 CABYRO75952 493 aa10.27□□□□□ -0.77
TNFRSF9-202ENST00000474475 CSF2RAP15509 400 aa10.27□□□□□ -0.77
TNFRSF9-202ENST00000474475 EDNRBP24530 442 aa10.27□□□□□ -0.77
TNFRSF9-202ENST00000474475 PSMC6P62333 389 aa10.27□□□□□ -0.77
TNFRSF9-202ENST00000474475 ITGA7Q13683 1181 aa10.27□□□□□ -0.77
TNFRSF9-202ENST00000474475 CDC37Q16543 378 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF9-202ENST00000474475 CCDC178Q5BJE1 867 aa10.27□□□□□ -0.77
TNFRSF9-202ENST00000474475 TTC22Q5TAA0 569 aa10.27□□□□□ -0.77
TNFRSF9-202ENST00000474475 TBC1D5Q92609 795 aa10.27□□□□□ -0.77
TNFRSF9-202ENST00000474475 CDX2Q99626 313 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF9-202ENST00000474475 WDR11Q9BZH6 1224 aa10.27□□□□□ -0.77
TNFRSF9-202ENST00000474475 CTNNA3Q9UI47 895 aa10.27□□□□□ -0.77
TNFRSF9-202ENST00000474475 DNAH12Q6ZR08 3092 aa10.27□□□□□ -0.77
TNFRSF9-202ENST00000474475 ZEB2O60315 1214 aa10.26□□□□□ -0.77
TNFRSF9-202ENST00000474475 ACRP10323 421 aa10.26□□□□□ -0.77
TNFRSF9-202ENST00000474475 CYP2C18P33260 490 aa10.26□□□□□ -0.77
TNFRSF9-202ENST00000474475 IRX6P78412 446 aaPredicted RBP10.26□□□□□ -0.77
TNFRSF9-202ENST00000474475 PDE4DQ08499 809 aa10.26□□□□□ -0.77
TNFRSF9-202ENST00000474475 PPIGQ13427 754 aaKnown RBP eCLIP10.26□□□□□ -0.77
TNFRSF9-202ENST00000474475 ASPRV1Q53RT3 343 aa10.26□□□□□ -0.77
TNFRSF9-202ENST00000474475 TMEM240Q5SV17 173 aa10.26□□□□□ -0.77
TNFRSF9-202ENST00000474475 TYW1BQ6NUM6 668 aa10.26□□□□□ -0.77
TNFRSF9-202ENST00000474475 ADGRF4Q8IZF3 695 aa10.26□□□□□ -0.77
TNFRSF9-202ENST00000474475 TMEM199Q8N511 208 aa10.26□□□□□ -0.77
TNFRSF9-202ENST00000474475 RGS22Q8NE09 1264 aa10.26□□□□□ -0.77
TNFRSF9-202ENST00000474475 DNERQ8NFT8 737 aa10.26□□□□□ -0.77
TNFRSF9-202ENST00000474475 KRT23Q9C075 422 aa10.26□□□□□ -0.77
TNFRSF9-202ENST00000474475 TRPV6Q9H1D0 765 aa10.26□□□□□ -0.77
TNFRSF9-202ENST00000474475 JMJD4Q9H9V9 463 aa10.26□□□□□ -0.77
TNFRSF9-202ENST00000474475 UMODL1Q5DID0 1318 aa10.26□□□□□ -0.77
TNFRSF9-202ENST00000474475 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 B4GALT4O60513 344 aa10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 PARP1P09874 1014 aaKnown RBP10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 PURAQ00577 322 aaKnown RBP10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 SEC23AQ15436 765 aa10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 QRICH1Q2TAL8 776 aa10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 TPRNQ4KMQ1 711 aa10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 RASIP1Q5U651 963 aa10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 ZNF365Q70YC5 407 aa10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 CYB5R4Q7L1T6 521 aa10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 STAG2Q8N3U4 1231 aa10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 ZNF454Q8N9F8 522 aa10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 OR6J1Q8NGC5 347 aa10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 SYTL5Q8TDW5 730 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 MYLIPQ8WY64 445 aa10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 COPS5Q92905 334 aa10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 UBAC1Q9BSL1 405 aa10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 CNNM2Q9H8M5 875 aa10.25□□□□□ -0.77
TNFRSF9-202ENST00000474475 COL20A1Q9P218 1284 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms