RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 C6orf50Q9HD87 102 aa23.52■■□□□ 1.36
SMIM11A-204ENST00000474455 ADAMTS5Q9UNA0 930 aa23.52■■□□□ 1.36
SMIM11A-204ENST00000474455 AGTPBP1Q9UPW5 1226 aa23.52■■□□□ 1.36
SMIM11A-204ENST00000474455 HOXA7P31268 230 aaPredicted RBP23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 JAKMIP3Q5VZ66 844 aa23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 DAGLBQ8NCG7 672 aa23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 PSTPIP2Q9H939 334 aa23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 RIC8AQ9NPQ8 531 aa23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 RTEL1Q9NZ71 1219 aa23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 DDX41Q9UJV9 622 aaKnown RBP23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 CLIC4Q9Y696 253 aa23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 ESYT2A0FGR8 921 aa23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 ICAM1P05362 532 aa23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 ATP2B1P20020 1258 aa23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 ADCY7P51828 1080 aa23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 TMEM132BQ14DG7 1078 aa23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 RASAL3Q86YV0 1011 aa23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 FSIP1Q8NA03 581 aa23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 BRI3BPQ8WY22 251 aa23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 MRPS27Q92552 414 aaKnown RBP23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 ASCC2Q9H1I8 757 aaPredicted RBP23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 BRMS1Q9HCU9 246 aa23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 CCPG1Q9ULG6 757 aa23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 RIPK3Q9Y572 518 aa23.51■■□□□ 1.35
SMIM11A-204ENST00000474455 SPDYE4A6NLX3 237 aa23.5■■□□□ 1.35
SMIM11A-204ENST00000474455 GNA11P29992 359 aa23.5■■□□□ 1.35
SMIM11A-204ENST00000474455 KCNJ6P48051 423 aa23.5■■□□□ 1.35
SMIM11A-204ENST00000474455 CCZ1BP86790 482 aa23.5■■□□□ 1.35
SMIM11A-204ENST00000474455 CCZ1P86791 482 aaPredicted RBP23.5■■□□□ 1.35
SMIM11A-204ENST00000474455 FASTKD5Q7L8L6 764 aaKnown RBP23.5■■□□□ 1.35
SMIM11A-204ENST00000474455 HOMER2Q9NSB8 354 aa23.5■■□□□ 1.35
SMIM11A-204ENST00000474455 MORC2Q9Y6X9 1032 aaPredicted RBP23.5■■□□□ 1.35
SMIM11A-204ENST00000474455 CCL15-CCL14A0A0B4J2E2 113 aa23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 MEIS2O14770 477 aa23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 ZBED4O75132 1171 aa23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 CCL15Q16663 113 aa23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 ADALQ6DHV7 355 aa23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 PPP1R18Q6NYC8 613 aa23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 ZNF397Q8NF99 534 aaPredicted RBP23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 ERO1AQ96HE7 468 aa23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 PTPN18Q99952 460 aa23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 HOXC10Q9NYD6 342 aa23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 TLL2Q9Y6L7 1015 aa23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 BTBD19C9JJ37 291 aa23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 ALAS1P13196 640 aa23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 CLK2P49760 499 aaKnown RBP23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 GTF2A2P52657 109 aa23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 RGMBQ6NW40 437 aa23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 FMR1NBQ8N0W7 255 aaPredicted RBP23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 CCAR2Q8N163 923 aaKnown RBP23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 ZNF214Q9UL59 606 aaPredicted RBP23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 ABT1Q9ULW3 272 aaKnown RBP23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 A0A0G2JMZ2 1700 aa23.49■■□□□ 1.35
SMIM11A-204ENST00000474455 ZBTB48P10074 688 aaPredicted RBP23.48■■□□□ 1.35
SMIM11A-204ENST00000474455 HOXA13P31271 388 aaPredicted RBP23.48■■□□□ 1.35
SMIM11A-204ENST00000474455 ME1P48163 572 aa23.48■■□□□ 1.35
SMIM11A-204ENST00000474455 MUM1L1Q5H9M0 696 aa23.48■■□□□ 1.35
SMIM11A-204ENST00000474455 GALNT17Q6IS24 598 aa23.48■■□□□ 1.35
SMIM11A-204ENST00000474455 CCDC150Q8NCX0 1101 aa23.48■■□□□ 1.35
SMIM11A-204ENST00000474455 CUL5Q93034 780 aa23.48■■□□□ 1.35
SMIM11A-204ENST00000474455 BTBD7Q9P203 1132 aa23.48■■□□□ 1.35
SMIM11A-204ENST00000474455 CTDP1Q9Y5B0 961 aaPredicted RBP23.48■■□□□ 1.35
SMIM11A-204ENST00000474455 PCDHB6Q9Y5E3 794 aa23.48■■□□□ 1.35
SMIM11A-204ENST00000474455 CYP2C8P10632 490 aa23.47■■□□□ 1.35
SMIM11A-204ENST00000474455 IRX3P78415 501 aaPredicted RBP23.47■■□□□ 1.35
SMIM11A-204ENST00000474455 REXO1Q8N1G1 1221 aaKnown RBP23.47■■□□□ 1.35
SMIM11A-204ENST00000474455 KIF18AQ8NI77 898 aa23.47■■□□□ 1.35
SMIM11A-204ENST00000474455 TMEM88BA6NKF7 163 aa23.47■■□□□ 1.35
SMIM11A-204ENST00000474455 NFIBO00712 420 aa23.47■■□□□ 1.35
SMIM11A-204ENST00000474455 YEATS4O95619 227 aa23.47■■□□□ 1.35
SMIM11A-204ENST00000474455 CETPP11597 493 aa23.47■■□□□ 1.35
SMIM11A-204ENST00000474455 TPM4P67936 248 aa23.47■■□□□ 1.35
SMIM11A-204ENST00000474455 PLS1Q14651 629 aa23.47■■□□□ 1.35
SMIM11A-204ENST00000474455 INF2Q27J81 1249 aa23.47■■□□□ 1.35
SMIM11A-204ENST00000474455 KCNG4Q8TDN1 519 aa23.47■■□□□ 1.35
SMIM11A-204ENST00000474455 CLEC4DQ8WXI8 215 aa23.47■■□□□ 1.35
SMIM11A-204ENST00000474455 CFBP00751 764 aa23.46■■□□□ 1.35
SMIM11A-204ENST00000474455 HERVK_113P62684 666 aa23.46■■□□□ 1.35
SMIM11A-204ENST00000474455 FAM177A1Q8N128 213 aaPredicted RBP23.46■■□□□ 1.35
SMIM11A-204ENST00000474455 R3HDMLQ9H3Y0 253 aa23.46■■□□□ 1.35
SMIM11A-204ENST00000474455 EDIL3O43854 480 aa23.45■■□□□ 1.35
SMIM11A-204ENST00000474455 MRPL12P52815 198 aaKnown RBP23.45■■□□□ 1.35
SMIM11A-204ENST00000474455 SF3A1Q15459 793 aaKnown RBP23.45■■□□□ 1.35
SMIM11A-204ENST00000474455 SNRNP48Q6IEG0 339 aaKnown RBP23.45■■□□□ 1.35
SMIM11A-204ENST00000474455 LBX2Q6XYB7 198 aa23.45■■□□□ 1.35
SMIM11A-204ENST00000474455 AOPEPQ8N6M6 819 aa23.45■■□□□ 1.35
SMIM11A-204ENST00000474455 ZIC5Q96T25 663 aa23.45■■□□□ 1.35
SMIM11A-204ENST00000474455 TXNRD2Q9NNW7 524 aa23.45■■□□□ 1.35
SMIM11A-204ENST00000474455 CCDC194A0A1B0GVG4 234 aa23.45■■□□□ 1.34
SMIM11A-204ENST00000474455 FAM155AB1AL88 458 aaPredicted RBP23.45■■□□□ 1.34
SMIM11A-204ENST00000474455 PDHXO00330 501 aa23.45■■□□□ 1.34
SMIM11A-204ENST00000474455 NRDCO43847 1150 aa23.45■■□□□ 1.34
SMIM11A-204ENST00000474455 CNMDO75829 334 aa23.45■■□□□ 1.34
SMIM11A-204ENST00000474455 ZRSR1Q15695 479 aaKnown RBP23.45■■□□□ 1.34
SMIM11A-204ENST00000474455 PAGR1Q9BTK6 254 aa23.45■■□□□ 1.34
SMIM11A-204ENST00000474455 ZHX1Q9UKY1 873 aaPredicted RBP23.45■■□□□ 1.34
SMIM11A-204ENST00000474455 PCDHA7Q9UN72 937 aa23.45■■□□□ 1.34
SMIM11A-204ENST00000474455 MRPL11Q9Y3B7 192 aaKnown RBP23.45■■□□□ 1.34
SMIM11A-204ENST00000474455 ABCB11O95342 1321 aa23.45■■□□□ 1.34
SMIM11A-204ENST00000474455 MYPNQ86TC9 1320 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms