RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 IFIT3O14879 490 aaKnown RBP23.69■■□□□ 1.38
PDLIM4-206ENST00000474421 MYL3P08590 195 aa23.69■■□□□ 1.38
PDLIM4-206ENST00000474421 SUPT20HL2P0C7V6 817 aa23.69■■□□□ 1.38
PDLIM4-206ENST00000474421 PSMC6P62333 389 aa23.69■■□□□ 1.38
PDLIM4-206ENST00000474421 STAG2Q8N3U4 1231 aa23.69■■□□□ 1.38
PDLIM4-206ENST00000474421 RMDN3Q96TC7 470 aa23.69■■□□□ 1.38
PDLIM4-206ENST00000474421 MAD2L2Q9UI95 211 aa23.69■■□□□ 1.38
PDLIM4-206ENST00000474421 A6NJR5 290 aa23.68■■□□□ 1.38
PDLIM4-206ENST00000474421 B4GALT4O60513 344 aa23.68■■□□□ 1.38
PDLIM4-206ENST00000474421 CYP2C18P33260 490 aa23.68■■□□□ 1.38
PDLIM4-206ENST00000474421 STXBP2Q15833 593 aa23.68■■□□□ 1.38
PDLIM4-206ENST00000474421 TMEM240Q5SV17 173 aa23.68■■□□□ 1.38
PDLIM4-206ENST00000474421 SAMD3Q8N6K7 520 aa23.68■■□□□ 1.38
PDLIM4-206ENST00000474421 TBC1D5Q92609 795 aa23.68■■□□□ 1.38
PDLIM4-206ENST00000474421 MTMR8Q96EF0 704 aa23.68■■□□□ 1.38
PDLIM4-206ENST00000474421 TAAR1Q96RJ0 339 aa23.68■■□□□ 1.38
PDLIM4-206ENST00000474421 TRPV6Q9H1D0 765 aa23.68■■□□□ 1.38
PDLIM4-206ENST00000474421 ALDH8A1Q9H2A2 487 aaPredicted RBP23.68■■□□□ 1.38
PDLIM4-206ENST00000474421 IL23AQ9NPF7 189 aa23.68■■□□□ 1.38
PDLIM4-206ENST00000474421 MAP3K20Q9NYL2 800 aaKnown RBP23.68■■□□□ 1.38
PDLIM4-206ENST00000474421 SCN10AQ9Y5Y9 1956 aa23.67■■□□□ 1.38
PDLIM4-206ENST00000474421 KIAA1217Q5T5P2 1943 aa23.67■■□□□ 1.38
PDLIM4-206ENST00000474421 E7EWF7 191 aa23.67■■□□□ 1.38
PDLIM4-206ENST00000474421 ZBTB5O15062 677 aa23.67■■□□□ 1.38
PDLIM4-206ENST00000474421 GRM4Q14833 912 aa23.67■■□□□ 1.38
PDLIM4-206ENST00000474421 WTAPQ15007 396 aa23.67■■□□□ 1.38
PDLIM4-206ENST00000474421 ARHGEF16Q5VV41 709 aa23.67■■□□□ 1.38
PDLIM4-206ENST00000474421 MAP4K1Q92918 833 aa23.67■■□□□ 1.38
PDLIM4-206ENST00000474421 MTIF3Q9H2K0 278 aaKnown RBP23.67■■□□□ 1.38
PDLIM4-206ENST00000474421 CFBP00751 764 aa23.66■■□□□ 1.38
PDLIM4-206ENST00000474421 C16orf59Q7L2K0 433 aa23.66■■□□□ 1.38
PDLIM4-206ENST00000474421 NOC4LQ9BVI4 516 aaKnown RBP23.66■■□□□ 1.38
PDLIM4-206ENST00000474421 COL20A1Q9P218 1284 aa23.66■■□□□ 1.38
PDLIM4-206ENST00000474421 HSD17B4P51659 736 aa23.65■■□□□ 1.38
PDLIM4-206ENST00000474421 GHRHRQ02643 423 aa23.65■■□□□ 1.38
PDLIM4-206ENST00000474421 RASIP1Q5U651 963 aa23.65■■□□□ 1.38
PDLIM4-206ENST00000474421 NFRKBQ6P4R8 1299 aa23.65■■□□□ 1.38
PDLIM4-206ENST00000474421 CCDC62Q6P9F0 684 aa23.65■■□□□ 1.38
PDLIM4-206ENST00000474421 SEPT14Q6ZU15 432 aa23.65■■□□□ 1.38
PDLIM4-206ENST00000474421 ZNF365Q70YC5 407 aa23.65■■□□□ 1.38
PDLIM4-206ENST00000474421 CATIPQ7Z7H3 387 aa23.65■■□□□ 1.38
PDLIM4-206ENST00000474421 COPS5Q92905 334 aa23.65■■□□□ 1.38
PDLIM4-206ENST00000474421 CDX2Q99626 313 aaPredicted RBP23.65■■□□□ 1.38
PDLIM4-206ENST00000474421 PCDHA1Q9Y5I3 950 aa23.65■■□□□ 1.38
PDLIM4-206ENST00000474421 EIF3JO75822 258 aaKnown RBP23.64■■□□□ 1.37
PDLIM4-206ENST00000474421 GH1P01241 217 aa23.64■■□□□ 1.37
PDLIM4-206ENST00000474421 ACRP10323 421 aa23.64■■□□□ 1.37
PDLIM4-206ENST00000474421 PTPN11Q06124 597 aaPredicted RBP23.64■■□□□ 1.37
PDLIM4-206ENST00000474421 TMEM67Q5HYA8 995 aa23.64■■□□□ 1.37
PDLIM4-206ENST00000474421 RPUSD2Q8IZ73 545 aaKnown RBP23.64■■□□□ 1.37
PDLIM4-206ENST00000474421 TTYH1Q9H313 450 aaPredicted RBP23.64■■□□□ 1.37
PDLIM4-206ENST00000474421 RIOX1Q9H6W3 641 aa23.64■■□□□ 1.37
PDLIM4-206ENST00000474421 PXMP2Q9NR77 195 aa23.64■■□□□ 1.37
PDLIM4-206ENST00000474421 A0A0C4DFX4 3053 aa23.64■■□□□ 1.37
PDLIM4-206ENST00000474421 BAZ2BQ9UIF8 2168 aaKnown RBP23.64■■□□□ 1.37
PDLIM4-206ENST00000474421 ARIH2O95376 493 aa23.63■■□□□ 1.37
PDLIM4-206ENST00000474421 EIF2AK2P19525 551 aaKnown RBP23.63■■□□□ 1.37
PDLIM4-206ENST00000474421 DNAJB2P25686 324 aa23.63■■□□□ 1.37
PDLIM4-206ENST00000474421 TROAPQ12815 778 aa23.63■■□□□ 1.37
PDLIM4-206ENST00000474421 NBPF20Q3BBV1 942 aa23.63■■□□□ 1.37
PDLIM4-206ENST00000474421 HERVK_113Q902F9 699 aa23.63■■□□□ 1.37
PDLIM4-206ENST00000474421 RBM8AQ9Y5S9 174 aaKnown RBP23.63■■□□□ 1.37
PDLIM4-206ENST00000474421 FGBP02675 491 aa23.62■■□□□ 1.37
PDLIM4-206ENST00000474421 NR3C2P08235 984 aa23.62■■□□□ 1.37
PDLIM4-206ENST00000474421 CCL23P55773 120 aa23.62■■□□□ 1.37
PDLIM4-206ENST00000474421 FAM47CQ5HY64 1035 aa23.62■■□□□ 1.37
PDLIM4-206ENST00000474421 STOX1Q6ZVD7 989 aa23.62■■□□□ 1.37
PDLIM4-206ENST00000474421 HOMER1Q86YM7 354 aa23.62■■□□□ 1.37
PDLIM4-206ENST00000474421 MTA3Q9BTC8 594 aa23.62■■□□□ 1.37
PDLIM4-206ENST00000474421 TRMT13Q9NUP7 481 aaKnown RBP23.62■■□□□ 1.37
PDLIM4-206ENST00000474421 TAF6LQ9Y6J9 622 aa23.62■■□□□ 1.37
PDLIM4-206ENST00000474421 UMODL1Q5DID0 1318 aa23.61■■□□□ 1.37
PDLIM4-206ENST00000474421 PNMA6FA0A0J9YX94 578 aa23.61■■□□□ 1.37
PDLIM4-206ENST00000474421 OPLAHO14841 1288 aa23.61■■□□□ 1.37
PDLIM4-206ENST00000474421 PPP1R11O60927 126 aaPredicted RBP23.61■■□□□ 1.37
PDLIM4-206ENST00000474421 LY6KQ17RY6 165 aa23.61■■□□□ 1.37
PDLIM4-206ENST00000474421 CHST3Q7LGC8 479 aa23.61■■□□□ 1.37
PDLIM4-206ENST00000474421 MB21D2Q8IYB1 491 aaPredicted RBP23.61■■□□□ 1.37
PDLIM4-206ENST00000474421 AFG1LQ8WV93 481 aa23.61■■□□□ 1.37
PDLIM4-206ENST00000474421 TIFAQ96CG3 184 aa23.61■■□□□ 1.37
PDLIM4-206ENST00000474421 MAP3K14Q99558 947 aa23.61■■□□□ 1.37
PDLIM4-206ENST00000474421 CDH23Q9H251 3354 aa23.6■■□□□ 1.37
PDLIM4-206ENST00000474421 PFKMP08237 780 aa23.6■■□□□ 1.37
PDLIM4-206ENST00000474421 ARHGAP1Q07960 439 aa23.6■■□□□ 1.37
PDLIM4-206ENST00000474421 KCNV1Q6PIU1 500 aa23.6■■□□□ 1.37
PDLIM4-206ENST00000474421 CASC1Q6TDU7 716 aa23.6■■□□□ 1.37
PDLIM4-206ENST00000474421 IGDCC4Q8TDY8 1250 aa23.6■■□□□ 1.37
PDLIM4-206ENST00000474421 EMID1Q96A84 441 aaPredicted RBP23.6■■□□□ 1.37
PDLIM4-206ENST00000474421 PIGSQ96S52 555 aa23.6■■□□□ 1.37
PDLIM4-206ENST00000474421 WNT8AQ9H1J5 351 aa23.6■■□□□ 1.37
PDLIM4-206ENST00000474421 SENP2Q9HC62 589 aa23.6■■□□□ 1.37
PDLIM4-206ENST00000474421 DDX41Q9UJV9 622 aaKnown RBP23.6■■□□□ 1.37
PDLIM4-206ENST00000474421 MRVI1Q9Y6F6 885 aa23.6■■□□□ 1.37
PDLIM4-206ENST00000474421 GCOM1H8Y6P7 765 aaPredicted RBP23.59■■□□□ 1.37
PDLIM4-206ENST00000474421 MMP3P08254 477 aa23.59■■□□□ 1.37
PDLIM4-206ENST00000474421 POLR2MP0CAP2 368 aa23.59■■□□□ 1.37
PDLIM4-206ENST00000474421 CYP2C9P11712 490 aa23.59■■□□□ 1.37
PDLIM4-206ENST00000474421 CASTP20810 708 aaKnown RBP23.59■■□□□ 1.37
PDLIM4-206ENST00000474421 KIF5BP33176 963 aa23.59■■□□□ 1.37
PDLIM4-206ENST00000474421 ANTXR2P58335 489 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms