RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 SLC43A3Q8NBI5 491 aa23.12■■□□□ 1.29
TMEM54-204ENST00000474144 RMDN3Q96TC7 470 aa23.12■■□□□ 1.29
TMEM54-204ENST00000474144 MAF1Q9H063 256 aa23.12■■□□□ 1.29
TMEM54-204ENST00000474144 BAZ2BQ9UIF8 2168 aaKnown RBP23.12■■□□□ 1.29
TMEM54-204ENST00000474144 PCDHA1Q9Y5I3 950 aa23.12■■□□□ 1.29
TMEM54-204ENST00000474144 TIMP1P01033 207 aa23.11■■□□□ 1.29
TMEM54-204ENST00000474144 PPP2R5BQ15173 497 aa23.11■■□□□ 1.29
TMEM54-204ENST00000474144 NSUN6Q8TEA1 469 aaKnown RBP23.11■■□□□ 1.29
TMEM54-204ENST00000474144 SCFD2Q8WU76 684 aa23.11■■□□□ 1.29
TMEM54-204ENST00000474144 PIBF1Q8WXW3 757 aa23.11■■□□□ 1.29
TMEM54-204ENST00000474144 B4DLN1 442 aa23.1■■□□□ 1.29
TMEM54-204ENST00000474144 CD4P01730 458 aa23.1■■□□□ 1.29
TMEM54-204ENST00000474144 TXNP10599 105 aaKnown RBP23.1■■□□□ 1.29
TMEM54-204ENST00000474144 EIF2AK2P19525 551 aaKnown RBP23.1■■□□□ 1.29
TMEM54-204ENST00000474144 HSD17B4P51659 736 aa23.1■■□□□ 1.29
TMEM54-204ENST00000474144 MRPL12P52815 198 aaKnown RBP23.1■■□□□ 1.29
TMEM54-204ENST00000474144 ARHGEF16Q5VV41 709 aa23.1■■□□□ 1.29
TMEM54-204ENST00000474144 CASC1Q6TDU7 716 aa23.1■■□□□ 1.29
TMEM54-204ENST00000474144 SEPT14Q6ZU15 432 aa23.1■■□□□ 1.29
TMEM54-204ENST00000474144 ZNF654Q8IZM8 581 aa23.1■■□□□ 1.29
TMEM54-204ENST00000474144 PXMP2Q9NR77 195 aa23.1■■□□□ 1.29
TMEM54-204ENST00000474144 SH2B2O14492 632 aaPredicted RBP23.09■■□□□ 1.29
TMEM54-204ENST00000474144 MYL3P08590 195 aa23.09■■□□□ 1.29
TMEM54-204ENST00000474144 HOXA13P31271 388 aaPredicted RBP23.09■■□□□ 1.29
TMEM54-204ENST00000474144 MCM5P33992 734 aa23.09■■□□□ 1.29
TMEM54-204ENST00000474144 FPGSQ05932 587 aa23.09■■□□□ 1.29
TMEM54-204ENST00000474144 GPR153Q6NV75 609 aa23.09■■□□□ 1.29
TMEM54-204ENST00000474144 DEFB123Q8N688 67 aa23.09■■□□□ 1.29
TMEM54-204ENST00000474144 LRRC2Q9BYS8 371 aa23.09■■□□□ 1.29
TMEM54-204ENST00000474144 PPP1R12CQ9BZL4 782 aa23.09■■□□□ 1.29
TMEM54-204ENST00000474144 NKRFO15226 690 aaKnown RBP eCLIP23.08■■□□□ 1.29
TMEM54-204ENST00000474144 TLR3O15455 904 aaKnown RBP23.08■■□□□ 1.29
TMEM54-204ENST00000474144 CPT1AP50416 773 aa23.08■■□□□ 1.29
TMEM54-204ENST00000474144 PURAQ00577 322 aaKnown RBP23.08■■□□□ 1.29
TMEM54-204ENST00000474144 GHRHRQ02643 423 aa23.08■■□□□ 1.29
TMEM54-204ENST00000474144 TTLL4Q14679 1199 aa23.08■■□□□ 1.29
TMEM54-204ENST00000474144 STXBP2Q15833 593 aa23.08■■□□□ 1.29
TMEM54-204ENST00000474144 LY6KQ17RY6 165 aa23.08■■□□□ 1.29
TMEM54-204ENST00000474144 CCDC62Q6P9F0 684 aa23.08■■□□□ 1.29
TMEM54-204ENST00000474144 PPP1R13LQ8WUF5 828 aa23.08■■□□□ 1.29
TMEM54-204ENST00000474144 IWS1Q96ST2 819 aa23.08■■□□□ 1.29
TMEM54-204ENST00000474144 TRPV6Q9H1D0 765 aa23.08■■□□□ 1.29
TMEM54-204ENST00000474144 KIAA1217Q5T5P2 1943 aa23.08■■□□□ 1.28
TMEM54-204ENST00000474144 PNMA6FA0A0J9YX94 578 aa23.07■■□□□ 1.28
TMEM54-204ENST00000474144 B4GALT4O60513 344 aa23.07■■□□□ 1.28
TMEM54-204ENST00000474144 DDAH1O94760 285 aa23.07■■□□□ 1.28
TMEM54-204ENST00000474144 RXRAP19793 462 aa23.07■■□□□ 1.28
TMEM54-204ENST00000474144 NFXL1Q6ZNB6 911 aa23.07■■□□□ 1.28
TMEM54-204ENST00000474144 RAB11FIP4Q86YS3 637 aa23.07■■□□□ 1.28
TMEM54-204ENST00000474144 CCDC136Q96JN2 1154 aa23.07■■□□□ 1.28
TMEM54-204ENST00000474144 POLR3EQ9NVU0 708 aa23.07■■□□□ 1.28
TMEM54-204ENST00000474144 NR3C2P08235 984 aa23.06■■□□□ 1.28
TMEM54-204ENST00000474144 MFSD5Q6N075 450 aa23.06■■□□□ 1.28
TMEM54-204ENST00000474144 CTCFLQ8NI51 663 aaPredicted RBP23.06■■□□□ 1.28
TMEM54-204ENST00000474144 TMEM87BQ96K49 555 aa23.06■■□□□ 1.28
TMEM54-204ENST00000474144 MTA3Q9BTC8 594 aa23.06■■□□□ 1.28
TMEM54-204ENST00000474144 UMODL1Q5DID0 1318 aa23.06■■□□□ 1.28
TMEM54-204ENST00000474144 A6NJR5 290 aa23.05■■□□□ 1.28
TMEM54-204ENST00000474144 CDC45O75419 566 aa23.05■■□□□ 1.28
TMEM54-204ENST00000474144 PLEKHA8P1O95397 391 aa23.05■■□□□ 1.28
TMEM54-204ENST00000474144 CYP2C18P33260 490 aa23.05■■□□□ 1.28
TMEM54-204ENST00000474144 CMTR1Q8N1G2 835 aaKnown RBP23.05■■□□□ 1.28
TMEM54-204ENST00000474144 MAP3K14Q99558 947 aa23.05■■□□□ 1.28
TMEM54-204ENST00000474144 PDCD2LQ9BRP1 358 aa23.05■■□□□ 1.28
TMEM54-204ENST00000474144 MTG1Q9BT17 334 aaPredicted RBP23.05■■□□□ 1.28
TMEM54-204ENST00000474144 CCDC69A6NI79 296 aa23.04■■□□□ 1.28
TMEM54-204ENST00000474144 EIF3JO75822 258 aaKnown RBP23.04■■□□□ 1.28
TMEM54-204ENST00000474144 MYCLP12524 364 aaPredicted RBP23.04■■□□□ 1.28
TMEM54-204ENST00000474144 CSF2RAP15509 400 aa23.04■■□□□ 1.28
TMEM54-204ENST00000474144 C16orf59Q7L2K0 433 aa23.04■■□□□ 1.28
TMEM54-204ENST00000474144 FCHSD1Q86WN1 690 aa23.04■■□□□ 1.28
TMEM54-204ENST00000474144 IL31RAQ8NI17 732 aa23.04■■□□□ 1.28
TMEM54-204ENST00000474144 AFG1LQ8WV93 481 aa23.04■■□□□ 1.28
TMEM54-204ENST00000474144 ZFP91Q96JP5 570 aaPredicted RBP23.04■■□□□ 1.28
TMEM54-204ENST00000474144 RNPC3Q96LT9 517 aaKnown RBP23.04■■□□□ 1.28
TMEM54-204ENST00000474144 ALDH8A1Q9H2A2 487 aaPredicted RBP23.04■■□□□ 1.28
TMEM54-204ENST00000474144 MAP3K20Q9NYL2 800 aaKnown RBP23.04■■□□□ 1.28
TMEM54-204ENST00000474144 GCOM1H8Y6P7 765 aaPredicted RBP23.03■■□□□ 1.28
TMEM54-204ENST00000474144 POLR2MP0CAP2 368 aa23.03■■□□□ 1.28
TMEM54-204ENST00000474144 ACRP10323 421 aa23.03■■□□□ 1.28
TMEM54-204ENST00000474144 LIFRP42702 1097 aa23.03■■□□□ 1.28
TMEM54-204ENST00000474144 ARHGAP1Q07960 439 aa23.03■■□□□ 1.28
TMEM54-204ENST00000474144 PGM5Q15124 567 aa23.03■■□□□ 1.28
TMEM54-204ENST00000474144 NBPF20Q3BBV1 942 aa23.03■■□□□ 1.28
TMEM54-204ENST00000474144 RASEFQ8IZ41 740 aa23.03■■□□□ 1.28
TMEM54-204ENST00000474144 TMTC2Q8N394 836 aa23.03■■□□□ 1.28
TMEM54-204ENST00000474144 SRBD1Q8N5C6 995 aaKnown RBP23.03■■□□□ 1.28
TMEM54-204ENST00000474144 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.03■■□□□ 1.28
TMEM54-204ENST00000474144 SPZ1Q9BXG8 430 aa23.03■■□□□ 1.28
TMEM54-204ENST00000474144 SEZ6LQ9BYH1 1024 aa23.03■■□□□ 1.28
TMEM54-204ENST00000474144 TRMT13Q9NUP7 481 aaKnown RBP23.03■■□□□ 1.28
TMEM54-204ENST00000474144 MTMR10Q9NXD2 777 aa23.03■■□□□ 1.28
TMEM54-204ENST00000474144 DDX41Q9UJV9 622 aaKnown RBP23.03■■□□□ 1.28
TMEM54-204ENST00000474144 COL6A3P12111 3177 aa23.03■■□□□ 1.28
TMEM54-204ENST00000474144 SCN10AQ9Y5Y9 1956 aa23.02■■□□□ 1.28
TMEM54-204ENST00000474144 RGS20O76081 388 aa23.02■■□□□ 1.28
TMEM54-204ENST00000474144 GH1P01241 217 aa23.02■■□□□ 1.28
TMEM54-204ENST00000474144 KIF5BP33176 963 aa23.02■■□□□ 1.28
TMEM54-204ENST00000474144 ADCK5Q3MIX3 580 aa23.02■■□□□ 1.28
TMEM54-204ENST00000474144 BRDTQ58F21 947 aaPredicted RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms