RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 KIZQ2M2Z5 673 aa6.91□□□□□ -1.3
PRPF40A-208ENST00000472760 HSF5Q4G112 596 aaPredicted RBP6.91□□□□□ -1.3
PRPF40A-208ENST00000472760 CNNM4Q6P4Q7 775 aa6.91□□□□□ -1.3
PRPF40A-208ENST00000472760 GALNT18Q6P9A2 607 aa6.91□□□□□ -1.3
PRPF40A-208ENST00000472760 SLCO6A1Q86UG4 719 aa6.91□□□□□ -1.3
PRPF40A-208ENST00000472760 SCLYQ96I15 445 aa6.91□□□□□ -1.3
PRPF40A-208ENST00000472760 MBNL3Q9NUK0 354 aaKnown RBP6.91□□□□□ -1.3
PRPF40A-208ENST00000472760 GULP1Q9UBP9 304 aa6.91□□□□□ -1.3
PRPF40A-208ENST00000472760 TAF6LQ9Y6J9 622 aa6.91□□□□□ -1.3
PRPF40A-208ENST00000472760 DNAJC8O75937 253 aaPredicted RBP6.9□□□□□ -1.3
PRPF40A-208ENST00000472760 RASGRP1O95267 797 aa6.9□□□□□ -1.3
PRPF40A-208ENST00000472760 ASLP04424 464 aa6.9□□□□□ -1.3
PRPF40A-208ENST00000472760 RNASE1P07998 156 aaKnown RBP6.9□□□□□ -1.3
PRPF40A-208ENST00000472760 RAC2P15153 192 aa6.9□□□□□ -1.3
PRPF40A-208ENST00000472760 FLT3P36888 993 aa6.9□□□□□ -1.3
PRPF40A-208ENST00000472760 GDNFP39905 211 aa6.9□□□□□ -1.3
PRPF40A-208ENST00000472760 ZNF792Q3KQV3 632 aa6.9□□□□□ -1.3
PRPF40A-208ENST00000472760 CEP68Q76N32 757 aa6.9□□□□□ -1.3
PRPF40A-208ENST00000472760 LRRTM3Q86VH5 581 aa6.9□□□□□ -1.3
PRPF40A-208ENST00000472760 IMPACTQ9P2X3 320 aa6.9□□□□□ -1.3
PRPF40A-208ENST00000472760 ADAMTS6Q9UKP5 1117 aa6.9□□□□□ -1.3
PRPF40A-208ENST00000472760 TNPO3Q9Y5L0 923 aaKnown RBP6.9□□□□□ -1.3
PRPF40A-208ENST00000472760 A0A1W2PQJ5 194 aa6.89□□□□□ -1.31
PRPF40A-208ENST00000472760 TCRBV16S1A1N1A0A5B0 115 aa6.89□□□□□ -1.31
PRPF40A-208ENST00000472760 B4E1Z4 1266 aa6.89□□□□□ -1.31
PRPF40A-208ENST00000472760 NRDCO43847 1150 aa6.89□□□□□ -1.31
PRPF40A-208ENST00000472760 IGFALSP35858 605 aa6.89□□□□□ -1.31
PRPF40A-208ENST00000472760 PAK1Q13153 545 aa6.89□□□□□ -1.31
PRPF40A-208ENST00000472760 ZC3H7AQ8IWR0 971 aaKnown RBP6.89□□□□□ -1.31
PRPF40A-208ENST00000472760 NUP43Q8NFH3 380 aa6.89□□□□□ -1.31
PRPF40A-208ENST00000472760 NLGN2Q8NFZ4 835 aa6.89□□□□□ -1.31
PRPF40A-208ENST00000472760 USP33Q8TEY7 942 aa6.89□□□□□ -1.31
PRPF40A-208ENST00000472760 DPF3Q92784 378 aa6.89□□□□□ -1.31
PRPF40A-208ENST00000472760 ASIC4Q96FT7 647 aa6.89□□□□□ -1.31
PRPF40A-208ENST00000472760 TMEM169Q96HH4 297 aa6.89□□□□□ -1.31
PRPF40A-208ENST00000472760 RC3H2Q9HBD1 1191 aaKnown RBP6.89□□□□□ -1.31
PRPF40A-208ENST00000472760 CLDND1Q9NY35 253 aa6.89□□□□□ -1.31
PRPF40A-208ENST00000472760 MARCH2Q9P0N8 246 aa6.89□□□□□ -1.31
PRPF40A-208ENST00000472760 PDE8AO60658 829 aa6.88□□□□□ -1.31
PRPF40A-208ENST00000472760 HPXP02790 462 aa6.88□□□□□ -1.31
PRPF40A-208ENST00000472760 SOD2P04179 222 aa6.88□□□□□ -1.31
PRPF40A-208ENST00000472760 SRGAP2CP0DJJ0 459 aa6.88□□□□□ -1.31
PRPF40A-208ENST00000472760 PRKCAP17252 672 aa6.88□□□□□ -1.31
PRPF40A-208ENST00000472760 IBSPP21815 317 aaPredicted RBP6.88□□□□□ -1.31
PRPF40A-208ENST00000472760 NEK4P51957 841 aa6.88□□□□□ -1.31
PRPF40A-208ENST00000472760 CORO7P57737 925 aa6.88□□□□□ -1.31
PRPF40A-208ENST00000472760 ERVFC1P60507 584 aa6.88□□□□□ -1.31
PRPF40A-208ENST00000472760 NR0B2Q15466 257 aa6.88□□□□□ -1.31
PRPF40A-208ENST00000472760 UBE2R2Q712K3 238 aaPredicted RBP6.88□□□□□ -1.31
PRPF40A-208ENST00000472760 MYLIPQ8WY64 445 aa6.88□□□□□ -1.31
PRPF40A-208ENST00000472760 DDX1Q92499 740 aaKnown RBP6.88□□□□□ -1.31
PRPF40A-208ENST00000472760 TRMT2BQ96GJ1 504 aaKnown RBP6.88□□□□□ -1.31
PRPF40A-208ENST00000472760 C19orf44Q9H6X5 657 aa6.88□□□□□ -1.31
PRPF40A-208ENST00000472760 C19orf73Q9NVV2 129 aa6.88□□□□□ -1.31
PRPF40A-208ENST00000472760 RWDD3Q9Y3V2 267 aa6.88□□□□□ -1.31
PRPF40A-208ENST00000472760 A0A087X0B3 334 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 FAM47E-STBD1D6RA91 191 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 ARVCFO00192 962 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 FUCA1P04066 466 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 GRK2P25098 689 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 CNGA1P29973 690 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 TRHRP34981 398 aaPredicted RBP6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 GRK3P35626 688 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 ZNF460Q14592 562 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 PTPROQ16827 1216 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 DDX53Q86TM3 631 aaKnown RBP6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 TEX2Q8IWB9 1127 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 LILRA2Q8N149 483 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 AHI1Q8N157 1196 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 LZTR1Q8N653 840 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 ZCRB1Q8TBF4 217 aaKnown RBP6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 CHAC2Q8WUX2 184 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 PLCD4Q9BRC7 762 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 TARS2Q9BW92 718 aaKnown RBP6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 IPPKQ9H8X2 491 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 PDLIM7Q9NR12 457 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 PPARGC1AQ9UBK2 798 aaKnown RBP6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 GPR160Q9UJ42 338 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 FBXL7Q9UJT9 491 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 ACSL6Q9UKU0 697 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 CTNND2Q9UQB3 1225 aa6.87□□□□□ -1.31
PRPF40A-208ENST00000472760 NOTOA8MTQ0 251 aa6.86□□□□□ -1.31
PRPF40A-208ENST00000472760 C22orf46C9J442 243 aa6.86□□□□□ -1.31
PRPF40A-208ENST00000472760 H7BY64 318 aa6.86□□□□□ -1.31
PRPF40A-208ENST00000472760 GSTA4O15217 222 aa6.86□□□□□ -1.31
PRPF40A-208ENST00000472760 PSPNO60542 156 aa6.86□□□□□ -1.31
PRPF40A-208ENST00000472760 PPP1R11O60927 126 aaPredicted RBP6.86□□□□□ -1.31
PRPF40A-208ENST00000472760 JMJD7P0C870 316 aa6.86□□□□□ -1.31
PRPF40A-208ENST00000472760 TACR1P25103 407 aa6.86□□□□□ -1.31
PRPF40A-208ENST00000472760 GP2P55259 537 aaKnown RBP6.86□□□□□ -1.31
PRPF40A-208ENST00000472760 ST5P78524 1137 aa6.86□□□□□ -1.31
PRPF40A-208ENST00000472760 CYP4F8P98187 520 aa6.86□□□□□ -1.31
PRPF40A-208ENST00000472760 MVKQ03426 396 aa6.86□□□□□ -1.31
PRPF40A-208ENST00000472760 CFAP100Q494V2 611 aa6.86□□□□□ -1.31
PRPF40A-208ENST00000472760 CT47A1Q5JQC4 288 aaPredicted RBP6.86□□□□□ -1.31
PRPF40A-208ENST00000472760 ARTNQ5T4W7 220 aa6.86□□□□□ -1.31
PRPF40A-208ENST00000472760 THNSL2Q86YJ6 484 aa6.86□□□□□ -1.31
PRPF40A-208ENST00000472760 PPM1KQ8N3J5 372 aa6.86□□□□□ -1.31
PRPF40A-208ENST00000472760 PCDH19Q8TAB3 1148 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms