RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 ADCY4Q8NFM4 1077 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 PLEKHO2Q8TD55 490 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 DDX1Q92499 740 aaKnown RBP3.41□□□□□ -1.86
COMMD3-209ENST00000471350 C1QTNF3Q9BXJ4 246 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 GINM1Q9NU53 330 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 EFR3BQ9Y2G0 817 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 SIT1Q9Y3P8 196 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 RWDD3Q9Y3V2 267 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 BACE2Q9Y5Z0 518 aa3.41□□□□□ -1.86
COMMD3-209ENST00000471350 NPHP3-ACAD11A0A0J9YXS1 232 aa3.4□□□□□ -1.87
COMMD3-209ENST00000471350 C2orf71A6NGG8 1288 aa3.4□□□□□ -1.87
COMMD3-209ENST00000471350 STXBP3O00186 592 aa3.4□□□□□ -1.87
COMMD3-209ENST00000471350 ARNTLO00327 626 aa3.4□□□□□ -1.87
COMMD3-209ENST00000471350 AKAP8O43823 692 aaKnown RBP3.4□□□□□ -1.87
COMMD3-209ENST00000471350 NPHS1O60500 1241 aa3.4□□□□□ -1.87
COMMD3-209ENST00000471350 VAMP4O75379 141 aa3.4□□□□□ -1.87
COMMD3-209ENST00000471350 GRB10Q13322 594 aa3.4□□□□□ -1.87
COMMD3-209ENST00000471350 TBC1D10BQ4KMP7 808 aaPredicted RBP3.4□□□□□ -1.87
COMMD3-209ENST00000471350 CCDC81Q6ZN84 652 aa3.4□□□□□ -1.87
COMMD3-209ENST00000471350 ARHGEF39Q8N4T4 335 aa3.4□□□□□ -1.87
COMMD3-209ENST00000471350 DPF3Q92784 378 aa3.4□□□□□ -1.87
COMMD3-209ENST00000471350 GPRASP2Q96D09 838 aa3.4□□□□□ -1.87
COMMD3-209ENST00000471350 RCC1LQ96I51 464 aaKnown RBP3.4□□□□□ -1.87
COMMD3-209ENST00000471350 GORASP1Q9BQQ3 440 aa3.4□□□□□ -1.87
COMMD3-209ENST00000471350 PCDH18Q9HCL0 1135 aa3.4□□□□□ -1.87
COMMD3-209ENST00000471350 GULP1Q9UBP9 304 aa3.4□□□□□ -1.87
COMMD3-209ENST00000471350 CGGBP1Q9UFW8 167 aaPredicted RBP3.4□□□□□ -1.87
COMMD3-209ENST00000471350 PALD1Q9ULE6 856 aa3.4□□□□□ -1.87
COMMD3-209ENST00000471350 A0A1W2PQH9 124 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 C7orf72A4D263 438 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 ANKRD34BA5PLL1 514 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 NOP56O00567 594 aaKnown RBP3.39□□□□□ -1.87
COMMD3-209ENST00000471350 SMARCA5O60264 1052 aaPredicted RBP3.39□□□□□ -1.87
COMMD3-209ENST00000471350 EPHX1P07099 455 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 VAMP1P23763 118 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 THBS2P35442 1172 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 SOX9P48436 509 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 GIPRP48546 466 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 MFAP1P55081 439 aaKnown RBP3.39□□□□□ -1.87
COMMD3-209ENST00000471350 CDSNQ15517 529 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 DPY19L1Q2PZI1 675 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 WWC2Q6AWC2 1192 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 TTLL7Q6ZT98 887 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 CPNE8Q86YQ8 564 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 MIB1Q86YT6 1006 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 ADAMTS17Q8TE56 1095 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 COPS5Q92905 334 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 DDX11Q96FC9 970 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 FGD4Q96M96 766 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 APBA2Q99767 749 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 AP5M1Q9H0R1 490 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.39□□□□□ -1.87
COMMD3-209ENST00000471350 NTMQ9P121 344 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 PCDHB10Q9UN67 800 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 AKT3Q9Y243 479 aa3.39□□□□□ -1.87
COMMD3-209ENST00000471350 SGSM2O43147 1006 aa3.38□□□□□ -1.87
COMMD3-209ENST00000471350 SARSP49591 514 aaKnown RBP3.38□□□□□ -1.87
COMMD3-209ENST00000471350 GJA9P57773 515 aa3.38□□□□□ -1.87
COMMD3-209ENST00000471350 SMAD4Q13485 552 aaKnown RBP3.38□□□□□ -1.87
COMMD3-209ENST00000471350 ZNF827Q17R98 1081 aa3.38□□□□□ -1.87
COMMD3-209ENST00000471350 IQCEQ6IPM2 695 aa3.38□□□□□ -1.87
COMMD3-209ENST00000471350 VHLLQ6RSH7 139 aa3.38□□□□□ -1.87
COMMD3-209ENST00000471350 FAM124AQ86V42 546 aa3.38□□□□□ -1.87
COMMD3-209ENST00000471350 METTL16Q86W50 562 aaKnown RBP3.38□□□□□ -1.87
COMMD3-209ENST00000471350 DCP2Q8IU60 420 aaKnown RBP3.38□□□□□ -1.87
COMMD3-209ENST00000471350 Q8N1X5 172 aa3.38□□□□□ -1.87
COMMD3-209ENST00000471350 FAM26EQ8N5C1 309 aa3.38□□□□□ -1.87
COMMD3-209ENST00000471350 RASGRP4Q8TDF6 673 aa3.38□□□□□ -1.87
COMMD3-209ENST00000471350 PPP1R14AQ96A00 147 aa3.38□□□□□ -1.87
COMMD3-209ENST00000471350 ZBTB8AQ96BR9 441 aa3.38□□□□□ -1.87
COMMD3-209ENST00000471350 SEC16BQ96JE7 1060 aa3.38□□□□□ -1.87
COMMD3-209ENST00000471350 C11orf84Q9BUA3 381 aaPredicted RBP3.38□□□□□ -1.87
COMMD3-209ENST00000471350 SMPD4Q9NXE4 827 aa3.38□□□□□ -1.87
COMMD3-209ENST00000471350 APEX2Q9UBZ4 518 aa3.38□□□□□ -1.87
COMMD3-209ENST00000471350 STRIP2Q9ULQ0 834 aa3.38□□□□□ -1.87
COMMD3-209ENST00000471350 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.38□□□□□ -1.87
COMMD3-209ENST00000471350 PLATP00750 562 aa3.37□□□□□ -1.87
COMMD3-209ENST00000471350 FUCA1P04066 466 aa3.37□□□□□ -1.87
COMMD3-209ENST00000471350 NTRK1P04629 796 aa3.37□□□□□ -1.87
COMMD3-209ENST00000471350 ZNF20P17024 532 aa3.37□□□□□ -1.87
COMMD3-209ENST00000471350 RPL13P26373 211 aaKnown RBP3.37□□□□□ -1.87
COMMD3-209ENST00000471350 NASPP49321 788 aaPredicted RBP3.37□□□□□ -1.87
COMMD3-209ENST00000471350 ZNF143P52747 638 aaPredicted RBP3.37□□□□□ -1.87
COMMD3-209ENST00000471350 CASP7P55210 303 aa3.37□□□□□ -1.87
COMMD3-209ENST00000471350 ZXDAP98168 799 aa3.37□□□□□ -1.87
COMMD3-209ENST00000471350 NCAPHQ15003 741 aa3.37□□□□□ -1.87
COMMD3-209ENST00000471350 INF2Q27J81 1249 aa3.37□□□□□ -1.87
COMMD3-209ENST00000471350 C9orf131Q5VYM1 1079 aa3.37□□□□□ -1.87
COMMD3-209ENST00000471350 KIAA1211LQ6NV74 962 aa3.37□□□□□ -1.87
COMMD3-209ENST00000471350 ZC3H18Q86VM9 953 aaKnown RBP3.37□□□□□ -1.87
COMMD3-209ENST00000471350 VPS37DQ86XT2 251 aa3.37□□□□□ -1.87
COMMD3-209ENST00000471350 NT5DC4Q86YG4 428 aa3.37□□□□□ -1.87
COMMD3-209ENST00000471350 Q8N1Y9 231 aa3.37□□□□□ -1.87
COMMD3-209ENST00000471350 TTC9BQ8N6N2 239 aa3.37□□□□□ -1.87
COMMD3-209ENST00000471350 SHDQ96IW2 340 aa3.37□□□□□ -1.87
COMMD3-209ENST00000471350 GPR20Q99678 358 aa3.37□□□□□ -1.87
COMMD3-209ENST00000471350 NGRNQ9NPE2 291 aaKnown RBP3.37□□□□□ -1.87
COMMD3-209ENST00000471350 MYO1BO43795 1136 aa3.36□□□□□ -1.87
COMMD3-209ENST00000471350 KCNH1O95259 989 aa3.36□□□□□ -1.87
COMMD3-209ENST00000471350 RECKO95980 971 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms