RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 AGBL1Q96MI9 1066 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 RAB34Q9BZG1 259 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 KCNMB3Q9NPA1 279 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 ANO10Q9NW15 660 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 MAP3K20Q9NYL2 800 aaKnown RBP10.61□□□□□ -0.71
VPS52-216ENST00000471309 RABGAP1Q9Y3P9 1069 aa10.61□□□□□ -0.71
VPS52-216ENST00000471309 CTDP1Q9Y5B0 961 aaPredicted RBP10.61□□□□□ -0.71
VPS52-216ENST00000471309 RPTORQ8N122 1335 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 A0A0G2JLL6 359 aaPredicted RBP10.6□□□□□ -0.71
VPS52-216ENST00000471309 CXCL11O14625 94 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 TBX3O15119 743 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 UBA7P41226 1012 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 MDM2Q00987 491 aaPredicted RBP10.6□□□□□ -0.71
VPS52-216ENST00000471309 PPIL2Q13356 520 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 PNOCQ13519 176 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 PDIA5Q14554 519 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 NT5DC1Q5TFE4 455 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 PDXDC2PQ6P474 469 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 ARMC9Q7Z3E5 817 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 PRRT2Q7Z6L0 340 aaPredicted RBP10.6□□□□□ -0.71
VPS52-216ENST00000471309 SLFN12Q8IYM2 578 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 PROCA1Q8NCQ7 364 aaPredicted RBP10.6□□□□□ -0.71
VPS52-216ENST00000471309 CLEC4DQ8WXI8 215 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 ANP32BQ92688 251 aaKnown RBP10.6□□□□□ -0.71
VPS52-216ENST00000471309 ERCC4Q92889 916 aaPredicted RBP10.6□□□□□ -0.71
VPS52-216ENST00000471309 PANK2Q9BZ23 570 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 MAF1Q9H063 256 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 DNAJC25Q9H1X3 360 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 CUEDC2Q9H467 287 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 ELP3Q9H9T3 547 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 MAGEF1Q9HAY2 307 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 RAVER2Q9HCJ3 691 aaKnown RBP10.6□□□□□ -0.71
VPS52-216ENST00000471309 DISC1Q9NRI5 854 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 CCDC39Q9UFE4 941 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 KCNH4Q9UQ05 1017 aa10.6□□□□□ -0.71
VPS52-216ENST00000471309 FRMPD4Q14CM0 1322 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 UTRNP46939 3433 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 PP2D1A8MPX8 630 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 NFIBO00712 420 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 SLC26A4O43511 780 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 ALAS1P13196 640 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 STAT6P42226 847 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 TECP42680 631 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 TXKP42681 527 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 ZNF165P49910 485 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 NLRP12P59046 1061 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 C1QTNF8P60827 252 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 TTLL12Q14166 644 aaPredicted RBP10.59□□□□□ -0.71
VPS52-216ENST00000471309 KARSQ15046 597 aaKnown RBP10.59□□□□□ -0.71
VPS52-216ENST00000471309 TKFCQ3LXA3 575 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 LDLRAD1Q5T700 205 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 C11orf57Q6ZUT1 292 aaPredicted RBP10.59□□□□□ -0.71
VPS52-216ENST00000471309 MOB2Q70IA6 237 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 CABP7Q86V35 215 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 FCHSD1Q86WN1 690 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 CPXCR1Q8N123 301 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 TRIML1Q8N9V2 468 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 SPATA20Q8TB22 786 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 HAS1Q92839 578 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 LENG9Q96B70 501 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 OTUD5Q96G74 571 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 PAGE5Q96GU1 130 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 CLMNQ96JQ2 1002 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 BPIFA3Q9BQP9 254 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 NAT10Q9H0A0 1025 aaKnown RBP10.59□□□□□ -0.71
VPS52-216ENST00000471309 TTC12Q9H892 705 aaPredicted RBP10.59□□□□□ -0.71
VPS52-216ENST00000471309 CBX8Q9HC52 389 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 LRWD1Q9UFC0 647 aa10.59□□□□□ -0.71
VPS52-216ENST00000471309 ZNF214Q9UL59 606 aaPredicted RBP10.59□□□□□ -0.71
VPS52-216ENST00000471309 SMCHD1A6NHR9 2005 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 IGLV3-22A0A075B6J6 115 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.58□□□□□ -0.72
VPS52-216ENST00000471309 SPDYE16A6NNV3 312 aaPredicted RBP10.58□□□□□ -0.72
VPS52-216ENST00000471309 FAM86B1E9PN63 330 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 IRF6O14896 467 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 FOXN1O15353 648 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 SMC2O95347 1197 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 MYL1P05976 194 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 FAM86B2P0C5J1 330 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 PRR29P0C7W0 189 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 POTEIP0CG38 1075 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 POTEJP0CG39 1038 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 HOXA7P31268 230 aaPredicted RBP10.58□□□□□ -0.72
VPS52-216ENST00000471309 SARSP49591 514 aaKnown RBP10.58□□□□□ -0.72
VPS52-216ENST00000471309 FKBP1BP68106 108 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 DPCR1Q3MIW9 517 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 PRR16Q569H4 304 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 MAP1SQ66K74 1059 aaPredicted RBP10.58□□□□□ -0.72
VPS52-216ENST00000471309 RASSF8Q8NHQ8 419 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 ETNPPLQ8TBG4 499 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 TBC1D5Q92609 795 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 SMARCE1Q969G3 411 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 WNK4Q96J92 1243 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 MMTAG2Q9BU76 263 aaKnown RBP10.58□□□□□ -0.72
VPS52-216ENST00000471309 TEX13BQ9BXU2 312 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 RNF146Q9NTX7 359 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 HOXC10Q9NYD6 342 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 CLEC11AQ9Y240 323 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 PCDHA5Q9Y5H7 936 aa10.58□□□□□ -0.72
VPS52-216ENST00000471309 POTEMA6NI47 508 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms