RNA–Protein interactions for RNA: ENST00000470471.1

PTK7-209, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 2

Gene PTK7, Length 854 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-209ENST00000470471 ZKSCAN3Q9BRR0 538 aa13.04□□□□□ -0.32
PTK7-209ENST00000470471 COL25A1Q9BXS0 654 aaPredicted RBP13.04□□□□□ -0.32
PTK7-209ENST00000470471 TRPV6Q9H1D0 765 aa13.04□□□□□ -0.32
PTK7-209ENST00000470471 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.04□□□□□ -0.32
PTK7-209ENST00000470471 CCPG1Q9ULG6 757 aa13.04□□□□□ -0.32
PTK7-209ENST00000470471 CTDP1Q9Y5B0 961 aaPredicted RBP13.04□□□□□ -0.32
PTK7-209ENST00000470471 NEDD4P46934 1319 aa13.04□□□□□ -0.32
PTK7-209ENST00000470471 CCDC171Q6TFL3 1326 aa13.04□□□□□ -0.32
PTK7-209ENST00000470471 DCDC2CA8MYV0 355 aa13.03□□□□□ -0.32
PTK7-209ENST00000470471 TRIM6-TRIM34B2RNG4 842 aa13.03□□□□□ -0.32
PTK7-209ENST00000470471 GOLGA8HP0CJ92 632 aa13.03□□□□□ -0.32
PTK7-209ENST00000470471 TOP1P11387 765 aaKnown RBP13.03□□□□□ -0.32
PTK7-209ENST00000470471 PSMC6P62333 389 aa13.03□□□□□ -0.32
PTK7-209ENST00000470471 FPGSQ05932 587 aa13.03□□□□□ -0.32
PTK7-209ENST00000470471 SYDE2Q5VT97 1194 aa13.03□□□□□ -0.32
PTK7-209ENST00000470471 NSMFQ6X4W1 530 aa13.03□□□□□ -0.32
PTK7-209ENST00000470471 RILPL2Q969X0 211 aa13.03□□□□□ -0.32
PTK7-209ENST00000470471 KDM4CQ9H3R0 1056 aa13.03□□□□□ -0.32
PTK7-209ENST00000470471 CXXC1Q9P0U4 656 aaPredicted RBP13.03□□□□□ -0.32
PTK7-209ENST00000470471 ISY1Q9ULR0 285 aaKnown RBP13.03□□□□□ -0.32
PTK7-209ENST00000470471 RBM47A0AV96 593 aaKnown RBP13.02□□□□□ -0.33
PTK7-209ENST00000470471 ZNF543Q08ER8 600 aa13.02□□□□□ -0.33
PTK7-209ENST00000470471 IKQ13123 557 aaPredicted RBP13.02□□□□□ -0.33
PTK7-209ENST00000470471 HIC1Q14526 733 aa13.02□□□□□ -0.33
PTK7-209ENST00000470471 FSCN1Q16658 493 aaKnown RBP13.02□□□□□ -0.33
PTK7-209ENST00000470471 CCDC96Q2M329 555 aa13.02□□□□□ -0.33
PTK7-209ENST00000470471 AKNAD1Q5T1N1 836 aa13.02□□□□□ -0.33
PTK7-209ENST00000470471 ZNF697Q5TEC3 545 aa13.02□□□□□ -0.33
PTK7-209ENST00000470471 SLC30A10Q6XR72 485 aa13.02□□□□□ -0.33
PTK7-209ENST00000470471 ZNF365Q70YC5 407 aa13.02□□□□□ -0.33
PTK7-209ENST00000470471 USP38Q8NB14 1042 aa13.02□□□□□ -0.33
PTK7-209ENST00000470471 PCSK9Q8NBP7 692 aaKnown RBP13.02□□□□□ -0.33
PTK7-209ENST00000470471 COPS5Q92905 334 aa13.02□□□□□ -0.33
PTK7-209ENST00000470471 VTI1AQ96AJ9 217 aa13.02□□□□□ -0.33
PTK7-209ENST00000470471 RNPC3Q96LT9 517 aaKnown RBP13.02□□□□□ -0.33
PTK7-209ENST00000470471 GLT1D1Q96MS3 346 aa13.02□□□□□ -0.33
PTK7-209ENST00000470471 PPP1R12CQ9BZL4 782 aa13.02□□□□□ -0.33
PTK7-209ENST00000470471 UBA5Q9GZZ9 404 aa13.02□□□□□ -0.33
PTK7-209ENST00000470471 TTC28Q96AY4 2481 aa13.02□□□□□ -0.33
PTK7-209ENST00000470471 GBF1Q92538 1859 aa13.02□□□□□ -0.33
PTK7-209ENST00000470471 A0A0U1RQG5 324 aaPredicted RBP13.01□□□□□ -0.33
PTK7-209ENST00000470471 ASB14A6NK59 587 aa13.01□□□□□ -0.33
PTK7-209ENST00000470471 GSPT1P15170 499 aaKnown RBP13.01□□□□□ -0.33
PTK7-209ENST00000470471 ALDH5A1P51649 535 aaPredicted RBP13.01□□□□□ -0.33
PTK7-209ENST00000470471 ITGA7Q13683 1181 aa13.01□□□□□ -0.33
PTK7-209ENST00000470471 SLC35G1Q2M3R5 365 aa13.01□□□□□ -0.33
PTK7-209ENST00000470471 IQSEC1Q6DN90 963 aa13.01□□□□□ -0.33
PTK7-209ENST00000470471 KIAA1211Q6ZU35 1233 aa13.01□□□□□ -0.33
PTK7-209ENST00000470471 TLK2Q86UE8 772 aa13.01□□□□□ -0.33
PTK7-209ENST00000470471 WNT8AQ9H1J5 351 aa13.01□□□□□ -0.33
PTK7-209ENST00000470471 COL20A1Q9P218 1284 aa13.01□□□□□ -0.33
PTK7-209ENST00000470471 SCN5AQ14524 2016 aa13.01□□□□□ -0.33
PTK7-209ENST00000470471 TET1Q8NFU7 2136 aa13.01□□□□□ -0.33
PTK7-209ENST00000470471 B4GALT4O60513 344 aa13□□□□□ -0.33
PTK7-209ENST00000470471 ARIH2O95376 493 aa13□□□□□ -0.33
PTK7-209ENST00000470471 EDNRBP24530 442 aa13□□□□□ -0.33
PTK7-209ENST00000470471 DUSP28Q4G0W2 176 aa13□□□□□ -0.33
PTK7-209ENST00000470471 CWC27Q6UX04 472 aaKnown RBP13□□□□□ -0.33
PTK7-209ENST00000470471 NOL8Q76FK4 1167 aaKnown RBP13□□□□□ -0.33
PTK7-209ENST00000470471 PHF6Q8IWS0 365 aaKnown RBP eCLIP13□□□□□ -0.33
PTK7-209ENST00000470471 IL27Q8NEV9 243 aa13□□□□□ -0.33
PTK7-209ENST00000470471 ANKS1AQ92625 1134 aa13□□□□□ -0.33
PTK7-209ENST00000470471 TTC14Q96N46 770 aa13□□□□□ -0.33
PTK7-209ENST00000470471 PRDM6Q9NQX0 595 aa13□□□□□ -0.33
PTK7-209ENST00000470471 TOMM22Q9NS69 142 aa13□□□□□ -0.33
PTK7-209ENST00000470471 ZSWIM5Q9P217 1185 aa13□□□□□ -0.33
PTK7-209ENST00000470471 TAF6LQ9Y6J9 622 aa13□□□□□ -0.33
PTK7-209ENST00000470471 BAZ2BQ9UIF8 2168 aaKnown RBP12.99□□□□□ -0.33
PTK7-209ENST00000470471 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.99□□□□□ -0.33
PTK7-209ENST00000470471 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.99□□□□□ -0.33
PTK7-209ENST00000470471 DNAJB2P25686 324 aa12.99□□□□□ -0.33
PTK7-209ENST00000470471 RPS6P62753 249 aaKnown RBP12.99□□□□□ -0.33
PTK7-209ENST00000470471 MFSD6Q6ZSS7 791 aa12.99□□□□□ -0.33
PTK7-209ENST00000470471 NOC4LQ9BVI4 516 aaKnown RBP12.99□□□□□ -0.33
PTK7-209ENST00000470471 PBX4Q9BYU1 374 aa12.99□□□□□ -0.33
PTK7-209ENST00000470471 WDR11Q9BZH6 1224 aa12.99□□□□□ -0.33
PTK7-209ENST00000470471 TRMT13Q9NUP7 481 aaKnown RBP12.99□□□□□ -0.33
PTK7-209ENST00000470471 TRIP12Q14669 1992 aaPredicted RBP12.99□□□□□ -0.33
PTK7-209ENST00000470471 SCN10AQ9Y5Y9 1956 aa12.99□□□□□ -0.33
PTK7-209ENST00000470471 PTPDC1A2A3K4 754 aa12.98□□□□□ -0.33
PTK7-209ENST00000470471 B4E1Z4 1266 aa12.98□□□□□ -0.33
PTK7-209ENST00000470471 OPLAHO14841 1288 aa12.98□□□□□ -0.33
PTK7-209ENST00000470471 KDM4AO75164 1064 aa12.98□□□□□ -0.33
PTK7-209ENST00000470471 CALML3P27482 149 aa12.98□□□□□ -0.33
PTK7-209ENST00000470471 CCL23P55773 120 aa12.98□□□□□ -0.33
PTK7-209ENST00000470471 COL9A3Q14050 684 aaPredicted RBP12.98□□□□□ -0.33
PTK7-209ENST00000470471 ADGRE1Q14246 886 aa12.98□□□□□ -0.33
PTK7-209ENST00000470471 TTC22Q5TAA0 569 aa12.98□□□□□ -0.33
PTK7-209ENST00000470471 STAG2Q8N3U4 1231 aa12.98□□□□□ -0.33
PTK7-209ENST00000470471 MAFAQ8NHW3 353 aaPredicted RBP12.98□□□□□ -0.33
PTK7-209ENST00000470471 TAAR1Q96RJ0 339 aa12.98□□□□□ -0.33
PTK7-209ENST00000470471 CTAGE1Q96RT6 745 aa12.98□□□□□ -0.33
PTK7-209ENST00000470471 SPC25Q9HBM1 224 aa12.98□□□□□ -0.33
PTK7-209ENST00000470471 SENP2Q9HC62 589 aa12.98□□□□□ -0.33
PTK7-209ENST00000470471 VTA1Q9NP79 307 aa12.98□□□□□ -0.33
PTK7-209ENST00000470471 YBX2Q9Y2T7 364 aaKnown RBP12.98□□□□□ -0.33
PTK7-209ENST00000470471 Q9Y3F1 56 aa12.98□□□□□ -0.33
PTK7-209ENST00000470471 CYP2C9P11712 490 aa12.97□□□□□ -0.33
PTK7-209ENST00000470471 MYOGP15173 224 aa12.97□□□□□ -0.33
PTK7-209ENST00000470471 PURAQ00577 322 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms