RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 COL20A1Q9P218 1284 aa25.35■■□□□ 1.65
TTC28-204ENST00000468807 MAD2L2Q9UI95 211 aa25.35■■□□□ 1.65
TTC28-204ENST00000468807 NKRFO15226 690 aaKnown RBP eCLIP25.34■■□□□ 1.65
TTC28-204ENST00000468807 B4GALT4O60513 344 aa25.34■■□□□ 1.65
TTC28-204ENST00000468807 ACRP10323 421 aa25.34■■□□□ 1.65
TTC28-204ENST00000468807 TTLL4Q14679 1199 aa25.34■■□□□ 1.65
TTC28-204ENST00000468807 ARHGEF16Q5VV41 709 aa25.34■■□□□ 1.65
TTC28-204ENST00000468807 SEPT14Q6ZU15 432 aa25.34■■□□□ 1.65
TTC28-204ENST00000468807 GUCD1Q96NT3 240 aa25.34■■□□□ 1.65
TTC28-204ENST00000468807 SEZ6LQ9BYH1 1024 aa25.34■■□□□ 1.65
TTC28-204ENST00000468807 A0A0C4DFX4 3053 aa25.34■■□□□ 1.65
TTC28-204ENST00000468807 EIF2AK2P19525 551 aaKnown RBP25.33■■□□□ 1.65
TTC28-204ENST00000468807 PURAQ00577 322 aaKnown RBP25.33■■□□□ 1.65
TTC28-204ENST00000468807 STOX1Q6ZVD7 989 aa25.33■■□□□ 1.65
TTC28-204ENST00000468807 MTG1Q9BT17 334 aaPredicted RBP25.33■■□□□ 1.65
TTC28-204ENST00000468807 SENP2Q9HC62 589 aa25.33■■□□□ 1.65
TTC28-204ENST00000468807 RBM8AQ9Y5S9 174 aaKnown RBP25.33■■□□□ 1.65
TTC28-204ENST00000468807 PALM3A6NDB9 673 aaPredicted RBP25.32■■□□□ 1.64
TTC28-204ENST00000468807 ZBTB5O15062 677 aa25.32■■□□□ 1.64
TTC28-204ENST00000468807 ARIH2O95376 493 aa25.32■■□□□ 1.64
TTC28-204ENST00000468807 CCL23P55773 120 aa25.32■■□□□ 1.64
TTC28-204ENST00000468807 CHMP4BP1P59074 171 aa25.32■■□□□ 1.64
TTC28-204ENST00000468807 GRM4Q14833 912 aa25.32■■□□□ 1.64
TTC28-204ENST00000468807 FAM47CQ5HY64 1035 aa25.32■■□□□ 1.64
TTC28-204ENST00000468807 TMEM67Q5HYA8 995 aa25.32■■□□□ 1.64
TTC28-204ENST00000468807 MAP4K1Q92918 833 aa25.32■■□□□ 1.64
TTC28-204ENST00000468807 MAF1Q9H063 256 aa25.32■■□□□ 1.64
TTC28-204ENST00000468807 ALDH8A1Q9H2A2 487 aaPredicted RBP25.32■■□□□ 1.64
TTC28-204ENST00000468807 PCDHA1Q9Y5I3 950 aa25.32■■□□□ 1.64
TTC28-204ENST00000468807 CDH23Q9H251 3354 aa25.32■■□□□ 1.64
TTC28-204ENST00000468807 BAZ2BQ9UIF8 2168 aaKnown RBP25.32■■□□□ 1.64
TTC28-204ENST00000468807 UMODL1Q5DID0 1318 aa25.32■■□□□ 1.64
TTC28-204ENST00000468807 STXBP2Q15833 593 aa25.31■■□□□ 1.64
TTC28-204ENST00000468807 CATIPQ7Z7H3 387 aa25.31■■□□□ 1.64
TTC28-204ENST00000468807 IWS1Q96ST2 819 aa25.31■■□□□ 1.64
TTC28-204ENST00000468807 SEMA6BQ9H3T3 888 aa25.31■■□□□ 1.64
TTC28-204ENST00000468807 TRMT13Q9NUP7 481 aaKnown RBP25.31■■□□□ 1.64
TTC28-204ENST00000468807 PPP1R11O60927 126 aaPredicted RBP25.3■■□□□ 1.64
TTC28-204ENST00000468807 TMEM240Q5SV17 173 aa25.3■■□□□ 1.64
TTC28-204ENST00000468807 PSRC1Q6PGN9 363 aaPredicted RBP25.3■■□□□ 1.64
TTC28-204ENST00000468807 ZNF365Q70YC5 407 aa25.3■■□□□ 1.64
TTC28-204ENST00000468807 C16orf59Q7L2K0 433 aa25.3■■□□□ 1.64
TTC28-204ENST00000468807 PPP1R13LQ8WUF5 828 aa25.3■■□□□ 1.64
TTC28-204ENST00000468807 PIGSQ96S52 555 aa25.3■■□□□ 1.64
TTC28-204ENST00000468807 KIAA1217Q5T5P2 1943 aa25.29■■□□□ 1.64
TTC28-204ENST00000468807 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.29■■□□□ 1.64
TTC28-204ENST00000468807 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.29■■□□□ 1.64
TTC28-204ENST00000468807 LY6KQ17RY6 165 aa25.29■■□□□ 1.64
TTC28-204ENST00000468807 MTMR8Q96EF0 704 aa25.29■■□□□ 1.64
TTC28-204ENST00000468807 CDX2Q99626 313 aaPredicted RBP25.29■■□□□ 1.64
TTC28-204ENST00000468807 NOC4LQ9BVI4 516 aaKnown RBP25.29■■□□□ 1.64
TTC28-204ENST00000468807 TTYH1Q9H313 450 aaPredicted RBP25.29■■□□□ 1.64
TTC28-204ENST00000468807 IL23AQ9NPF7 189 aa25.29■■□□□ 1.64
TTC28-204ENST00000468807 PXMP2Q9NR77 195 aa25.29■■□□□ 1.64
TTC28-204ENST00000468807 A6NJR5 290 aa25.28■■□□□ 1.64
TTC28-204ENST00000468807 OPLAHO14841 1288 aa25.28■■□□□ 1.64
TTC28-204ENST00000468807 KPNA6O60684 536 aa25.28■■□□□ 1.64
TTC28-204ENST00000468807 CYP2C9P11712 490 aa25.28■■□□□ 1.64
TTC28-204ENST00000468807 NBPF20Q3BBV1 942 aa25.28■■□□□ 1.64
TTC28-204ENST00000468807 PIBF1Q8WXW3 757 aa25.28■■□□□ 1.64
TTC28-204ENST00000468807 EYSQ5T1H1 3165 aa25.28■■□□□ 1.64
TTC28-204ENST00000468807 UNC80Q8N2C7 3258 aa25.27■■□□□ 1.64
TTC28-204ENST00000468807 GH1P01241 217 aa25.27■■□□□ 1.64
TTC28-204ENST00000468807 SUPT20HL2P0C7V6 817 aa25.27■■□□□ 1.64
TTC28-204ENST00000468807 MYCLP12524 364 aaPredicted RBP25.27■■□□□ 1.64
TTC28-204ENST00000468807 HOXA13P31271 388 aaPredicted RBP25.27■■□□□ 1.64
TTC28-204ENST00000468807 HSD17B4P51659 736 aa25.27■■□□□ 1.64
TTC28-204ENST00000468807 ANTXR2P58335 489 aa25.27■■□□□ 1.64
TTC28-204ENST00000468807 MB21D2Q8IYB1 491 aaPredicted RBP25.27■■□□□ 1.64
TTC28-204ENST00000468807 AFG1LQ8WV93 481 aa25.27■■□□□ 1.64
TTC28-204ENST00000468807 SCN10AQ9Y5Y9 1956 aa25.26■■□□□ 1.63
TTC28-204ENST00000468807 EIF3JO75822 258 aaKnown RBP25.26■■□□□ 1.63
TTC28-204ENST00000468807 NR3C2P08235 984 aa25.26■■□□□ 1.63
TTC28-204ENST00000468807 DNAJB2P25686 324 aa25.26■■□□□ 1.63
TTC28-204ENST00000468807 TROAPQ12815 778 aa25.26■■□□□ 1.63
TTC28-204ENST00000468807 TRAF1Q13077 416 aa25.26■■□□□ 1.63
TTC28-204ENST00000468807 SLC35G1Q2M3R5 365 aa25.26■■□□□ 1.63
TTC28-204ENST00000468807 CCDC62Q6P9F0 684 aa25.26■■□□□ 1.63
TTC28-204ENST00000468807 CASC1Q6TDU7 716 aa25.26■■□□□ 1.63
TTC28-204ENST00000468807 SCLYQ96I15 445 aa25.26■■□□□ 1.63
TTC28-204ENST00000468807 WNT8AQ9H1J5 351 aa25.26■■□□□ 1.63
TTC28-204ENST00000468807 RIOX1Q9H6W3 641 aa25.26■■□□□ 1.63
TTC28-204ENST00000468807 MRVI1Q9Y6F6 885 aa25.26■■□□□ 1.63
TTC28-204ENST00000468807 CYTH3O43739 400 aa25.25■■□□□ 1.63
TTC28-204ENST00000468807 FGBP02675 491 aa25.25■■□□□ 1.63
TTC28-204ENST00000468807 SKAP1Q86WV1 359 aa25.25■■□□□ 1.63
TTC28-204ENST00000468807 IGDCC4Q8TDY8 1250 aa25.25■■□□□ 1.63
TTC28-204ENST00000468807 MYLIPQ8WY64 445 aa25.25■■□□□ 1.63
TTC28-204ENST00000468807 ESYT1Q9BSJ8 1104 aa25.25■■□□□ 1.63
TTC28-204ENST00000468807 MTIF3Q9H2K0 278 aaKnown RBP25.25■■□□□ 1.63
TTC28-204ENST00000468807 ANO2Q9NQ90 1003 aa25.25■■□□□ 1.63
TTC28-204ENST00000468807 PNMA6FA0A0J9YX94 578 aa25.24■■□□□ 1.63
TTC28-204ENST00000468807 GRXCR1A8MXD5 290 aa25.24■■□□□ 1.63
TTC28-204ENST00000468807 PRC1O43663 620 aa25.24■■□□□ 1.63
TTC28-204ENST00000468807 MMP3P08254 477 aa25.24■■□□□ 1.63
TTC28-204ENST00000468807 ARHGAP1Q07960 439 aa25.24■■□□□ 1.63
TTC28-204ENST00000468807 NFRKBQ6P4R8 1299 aa25.24■■□□□ 1.63
TTC28-204ENST00000468807 NFXL1Q6ZNB6 911 aa25.24■■□□□ 1.63
TTC28-204ENST00000468807 OTOP2Q7RTS6 562 aa25.24■■□□□ 1.63
TTC28-204ENST00000468807 FCHSD1Q86WN1 690 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms