RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 FXR1P51114 621 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDHR3-205ENST00000468143 HSD17B4P51659 736 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 MRPL12P52815 198 aaKnown RBP13.37□□□□□ -0.27
CDHR3-205ENST00000468143 KRT32Q14532 448 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 PWP2Q15269 919 aaKnown RBP13.37□□□□□ -0.27
CDHR3-205ENST00000468143 C1orf53Q5VUE5 145 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 SYNE3Q6ZMZ3 975 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 FCHSD1Q86WN1 690 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 MICU3Q86XE3 530 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 FANCBQ8NB91 859 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 OR6J1Q8NGC5 347 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 TRIM43Q96BQ3 446 aaPredicted RBP13.37□□□□□ -0.27
CDHR3-205ENST00000468143 RRP36Q96EU6 259 aaKnown RBP13.37□□□□□ -0.27
CDHR3-205ENST00000468143 LBHD1Q9BQE6 289 aaPredicted RBP13.37□□□□□ -0.27
CDHR3-205ENST00000468143 PDLIM7Q9NR12 457 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 PXMP2Q9NR77 195 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 Q9Y3F1 56 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 SNX14Q9Y5W7 946 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 LCTP09848 1927 aa13.37□□□□□ -0.27
CDHR3-205ENST00000468143 GCOM1H8Y6P7 765 aaPredicted RBP13.36□□□□□ -0.27
CDHR3-205ENST00000468143 ARIH2O95376 493 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 NR3C2P08235 984 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 POLR2MP0CAP2 368 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 MYCLP12524 364 aaPredicted RBP13.36□□□□□ -0.27
CDHR3-205ENST00000468143 BMP8BP34820 402 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 GNAQP50148 359 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 PSMC6P62333 389 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 NKX3-2P78367 333 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 PPP2R5BQ15173 497 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 STXBP2Q15833 593 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 LY6KQ17RY6 165 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 ERICH6BQ5W0A0 696 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 SGMS1Q86VZ5 419 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 SCFD2Q8WU76 684 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 BADQ92934 168 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 KCNB2Q92953 911 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 JAKMIP1Q96N16 626 aaKnown RBP13.36□□□□□ -0.27
CDHR3-205ENST00000468143 IWS1Q96ST2 819 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 LZTS2Q9BRK4 669 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 SPZ1Q9BXG8 430 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 MAF1Q9H063 256 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 NAP1L2Q9ULW6 460 aaPredicted RBP13.36□□□□□ -0.27
CDHR3-205ENST00000468143 MCM3APO60318 1980 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 ELP1O95163 1332 aa13.36□□□□□ -0.27
CDHR3-205ENST00000468143 A0A0U1RQG5 324 aaPredicted RBP13.35□□□□□ -0.27
CDHR3-205ENST00000468143 DCDC2CA8MYV0 355 aa13.35□□□□□ -0.27
CDHR3-205ENST00000468143 ARVCFO00192 962 aa13.35□□□□□ -0.27
CDHR3-205ENST00000468143 ZEB2O60315 1214 aa13.35□□□□□ -0.27
CDHR3-205ENST00000468143 REC8O95072 547 aa13.35□□□□□ -0.27
CDHR3-205ENST00000468143 MYL3P08590 195 aa13.35□□□□□ -0.27
CDHR3-205ENST00000468143 CLTBP09497 229 aa13.35□□□□□ -0.27
CDHR3-205ENST00000468143 ITGB8P26012 769 aa13.35□□□□□ -0.27
CDHR3-205ENST00000468143 SMARCA1P28370 1054 aa13.35□□□□□ -0.27
CDHR3-205ENST00000468143 CDK7P50613 346 aa13.35□□□□□ -0.27
CDHR3-205ENST00000468143 FGD1P98174 961 aa13.35□□□□□ -0.27
CDHR3-205ENST00000468143 FAAP100Q0VG06 881 aa13.35□□□□□ -0.27
CDHR3-205ENST00000468143 TRAF1Q13077 416 aa13.35□□□□□ -0.27
CDHR3-205ENST00000468143 TTLL4Q14679 1199 aa13.35□□□□□ -0.27
CDHR3-205ENST00000468143 PPP1R13LQ8WUF5 828 aa13.35□□□□□ -0.27
CDHR3-205ENST00000468143 PDCD2LQ9BRP1 358 aa13.35□□□□□ -0.27
CDHR3-205ENST00000468143 TMEM39AQ9NV64 488 aa13.35□□□□□ -0.27
CDHR3-205ENST00000468143 SEC63Q9UGP8 760 aaKnown RBP13.35□□□□□ -0.27
CDHR3-205ENST00000468143 KLF18A0A0U1RQI7 1052 aa13.34□□□□□ -0.27
CDHR3-205ENST00000468143 SORBS3O60504 671 aa13.34□□□□□ -0.27
CDHR3-205ENST00000468143 EIF3JO75822 258 aaKnown RBP13.34□□□□□ -0.27
CDHR3-205ENST00000468143 HMGB1P09429 215 aaKnown RBP13.34□□□□□ -0.27
CDHR3-205ENST00000468143 GHRHRQ02643 423 aa13.34□□□□□ -0.27
CDHR3-205ENST00000468143 ITGA7Q13683 1181 aa13.34□□□□□ -0.27
CDHR3-205ENST00000468143 PGM5Q15124 567 aa13.34□□□□□ -0.27
CDHR3-205ENST00000468143 CCDC62Q6P9F0 684 aa13.34□□□□□ -0.27
CDHR3-205ENST00000468143 APOA5Q6Q788 366 aa13.34□□□□□ -0.27
CDHR3-205ENST00000468143 USP17L6PQ6QN14 398 aa13.34□□□□□ -0.27
CDHR3-205ENST00000468143 Q6ZUG5 572 aa13.34□□□□□ -0.27
CDHR3-205ENST00000468143 TMTC3Q6ZXV5 915 aa13.34□□□□□ -0.27
CDHR3-205ENST00000468143 ANKRD33Q7Z3H0 272 aa13.34□□□□□ -0.27
CDHR3-205ENST00000468143 IL31RAQ8NI17 732 aa13.34□□□□□ -0.27
CDHR3-205ENST00000468143 MAP3K20Q9NYL2 800 aaKnown RBP13.34□□□□□ -0.27
CDHR3-205ENST00000468143 GRIN2DO15399 1336 aa13.34□□□□□ -0.27
CDHR3-205ENST00000468143 LRRC37A2A6NM11 1700 aa13.33□□□□□ -0.27
CDHR3-205ENST00000468143 SOX1O00570 391 aaPredicted RBP13.33□□□□□ -0.28
CDHR3-205ENST00000468143 NKRFO15226 690 aaKnown RBP eCLIP13.33□□□□□ -0.28
CDHR3-205ENST00000468143 ZBTB43O43298 467 aa13.33□□□□□ -0.28
CDHR3-205ENST00000468143 CABYRO75952 493 aa13.33□□□□□ -0.28
CDHR3-205ENST00000468143 RAG1P15918 1043 aa13.33□□□□□ -0.28
CDHR3-205ENST00000468143 CHMP4BP1P59074 171 aa13.33□□□□□ -0.28
CDHR3-205ENST00000468143 APOBRQ0VD83 1088 aa13.33□□□□□ -0.28
CDHR3-205ENST00000468143 BLOC1S2Q6QNY1 142 aa13.33□□□□□ -0.28
CDHR3-205ENST00000468143 TDHQ8IZJ6 230 aa13.33□□□□□ -0.28
CDHR3-205ENST00000468143 SAMD3Q8N6K7 520 aa13.33□□□□□ -0.28
CDHR3-205ENST00000468143 SMARCC2Q8TAQ2 1214 aa13.33□□□□□ -0.28
CDHR3-205ENST00000468143 TOX2Q96NM4 488 aa13.33□□□□□ -0.28
CDHR3-205ENST00000468143 A0A1W2PPC1 479 aa13.32□□□□□ -0.28
CDHR3-205ENST00000468143 GOLGA8AA7E2F4 631 aa13.32□□□□□ -0.28
CDHR3-205ENST00000468143 GOLGA8BA8MQT2 603 aa13.32□□□□□ -0.28
CDHR3-205ENST00000468143 KIAA0355O15063 1070 aa13.32□□□□□ -0.28
CDHR3-205ENST00000468143 RGS20O76081 388 aa13.32□□□□□ -0.28
CDHR3-205ENST00000468143 CDC27P30260 824 aa13.32□□□□□ -0.28
CDHR3-205ENST00000468143 CPT1AP50416 773 aa13.32□□□□□ -0.28
CDHR3-205ENST00000468143 RTN1Q16799 776 aa13.32□□□□□ -0.28
CDHR3-205ENST00000468143 HEATR3Q7Z4Q2 680 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms