RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 RNF38Q9H0F5 515 aa6.72□□□□□ -1.33
SMC4-207ENST00000467263 SPATA6Q9NWH7 488 aaPredicted RBP6.72□□□□□ -1.33
SMC4-207ENST00000467263 SF3B6Q9Y3B4 125 aaKnown RBP6.72□□□□□ -1.33
SMC4-207ENST00000467263 TBC1D8O95759 1140 aa6.71□□□□□ -1.34
SMC4-207ENST00000467263 CNR2P34972 360 aa6.71□□□□□ -1.34
SMC4-207ENST00000467263 POU4F1Q01851 419 aa6.71□□□□□ -1.34
SMC4-207ENST00000467263 ZXDCQ2QGD7 858 aaPredicted RBP6.71□□□□□ -1.34
SMC4-207ENST00000467263 LARP1BQ659C4 914 aaKnown RBP6.71□□□□□ -1.34
SMC4-207ENST00000467263 CPNE8Q86YQ8 564 aa6.71□□□□□ -1.34
SMC4-207ENST00000467263 CARFQ8N187 725 aa6.71□□□□□ -1.34
SMC4-207ENST00000467263 SMARCC2Q8TAQ2 1214 aa6.71□□□□□ -1.34
SMC4-207ENST00000467263 FGD4Q96M96 766 aa6.71□□□□□ -1.34
SMC4-207ENST00000467263 KLHL25Q9H0H3 589 aa6.71□□□□□ -1.34
SMC4-207ENST00000467263 TMPRSS5Q9H3S3 457 aa6.71□□□□□ -1.34
SMC4-207ENST00000467263 USP40Q9NVE5 1235 aa6.71□□□□□ -1.34
SMC4-207ENST00000467263 ACTR10Q9NZ32 417 aa6.71□□□□□ -1.34
SMC4-207ENST00000467263 GULP1Q9UBP9 304 aa6.71□□□□□ -1.34
SMC4-207ENST00000467263 SIT1Q9Y3P8 196 aa6.71□□□□□ -1.34
SMC4-207ENST00000467263 AURKAO14965 403 aa6.7□□□□□ -1.34
SMC4-207ENST00000467263 EPHX1P07099 455 aa6.7□□□□□ -1.34
SMC4-207ENST00000467263 PUM1Q14671 1186 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMC4-207ENST00000467263 TCEAL1Q15170 157 aa6.7□□□□□ -1.34
SMC4-207ENST00000467263 HEATR6Q6AI08 1181 aaKnown RBP6.7□□□□□ -1.34
SMC4-207ENST00000467263 RCSD1Q6JBY9 416 aa6.7□□□□□ -1.34
SMC4-207ENST00000467263 ADAT2Q7Z6V5 191 aaKnown RBP6.7□□□□□ -1.34
SMC4-207ENST00000467263 NPM2Q86SE8 214 aaKnown RBP6.7□□□□□ -1.34
SMC4-207ENST00000467263 MTA3Q9BTC8 594 aa6.7□□□□□ -1.34
SMC4-207ENST00000467263 PRKAG3Q9UGI9 489 aa6.7□□□□□ -1.34
SMC4-207ENST00000467263 TNNI3KQ59H18 835 aa6.69□□□□□ -1.34
SMC4-207ENST00000467263 TSPAN17Q96FV3 270 aa6.69□□□□□ -1.34
SMC4-207ENST00000467263 DIS3Q9Y2L1 958 aaKnown RBP6.69□□□□□ -1.34
SMC4-207ENST00000467263 A0A087WZG4 1122 aa6.68□□□□□ -1.34
SMC4-207ENST00000467263 B2RBV5 119 aa6.68□□□□□ -1.34
SMC4-207ENST00000467263 K7ESM1 405 aa6.68□□□□□ -1.34
SMC4-207ENST00000467263 SMAD4Q13485 552 aaKnown RBP6.68□□□□□ -1.34
SMC4-207ENST00000467263 C6orf15Q6UXA7 325 aaPredicted RBP6.68□□□□□ -1.34
SMC4-207ENST00000467263 LZTR1Q8N653 840 aa6.68□□□□□ -1.34
SMC4-207ENST00000467263 MICAL1Q8TDZ2 1067 aa6.68□□□□□ -1.34
SMC4-207ENST00000467263 HNRNPLLQ8WVV9 542 aaKnown RBP6.68□□□□□ -1.34
SMC4-207ENST00000467263 DDX11Q96FC9 970 aa6.68□□□□□ -1.34
SMC4-207ENST00000467263 LNPKQ9C0E8 428 aa6.68□□□□□ -1.34
SMC4-207ENST00000467263 DDAH1O94760 285 aa6.67□□□□□ -1.34
SMC4-207ENST00000467263 EEF1DP3Q658K8 133 aa6.67□□□□□ -1.34
SMC4-207ENST00000467263 MBLAC2Q68D91 279 aa6.67□□□□□ -1.34
SMC4-207ENST00000467263 ANKS3Q6ZW76 656 aa6.67□□□□□ -1.34
SMC4-207ENST00000467263 ZNF761Q86XN6 746 aaPredicted RBP6.67□□□□□ -1.34
SMC4-207ENST00000467263 ZBTB8AQ96BR9 441 aa6.67□□□□□ -1.34
SMC4-207ENST00000467263 C8orf37Q96NL8 207 aa6.67□□□□□ -1.34
SMC4-207ENST00000467263 RBM15Q96T37 977 aaKnown RBP eCLIP6.67□□□□□ -1.34
SMC4-207ENST00000467263 TANGO6Q9C0B7 1094 aa6.67□□□□□ -1.34
SMC4-207ENST00000467263 GBP3Q9H0R5 595 aa6.67□□□□□ -1.34
SMC4-207ENST00000467263 WHRNQ9P202 907 aa6.67□□□□□ -1.34
SMC4-207ENST00000467263 CGGBP1Q9UFW8 167 aaPredicted RBP6.67□□□□□ -1.34
SMC4-207ENST00000467263 SUGT1Q9Y2Z0 365 aa6.67□□□□□ -1.34
SMC4-207ENST00000467263 R3HCC1Q9Y3T6 440 aaKnown RBP6.67□□□□□ -1.34
SMC4-207ENST00000467263 C2orf71A6NGG8 1288 aa6.66□□□□□ -1.34
SMC4-207ENST00000467263 PPM1BO75688 479 aa6.66□□□□□ -1.34
SMC4-207ENST00000467263 C8BP07358 591 aa6.66□□□□□ -1.34
SMC4-207ENST00000467263 CACNB2Q08289 660 aaPredicted RBP6.66□□□□□ -1.34
SMC4-207ENST00000467263 FAM178BQ8IXR5 827 aa6.66□□□□□ -1.34
SMC4-207ENST00000467263 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
SMC4-207ENST00000467263 APEX2Q9UBZ4 518 aa6.66□□□□□ -1.34
SMC4-207ENST00000467263 ANKRD34BA5PLL1 514 aa6.65□□□□□ -1.34
SMC4-207ENST00000467263 ITGB3P05106 788 aa6.65□□□□□ -1.34
SMC4-207ENST00000467263 SARSP49591 514 aaKnown RBP6.65□□□□□ -1.34
SMC4-207ENST00000467263 NCAPHQ15003 741 aa6.65□□□□□ -1.34
SMC4-207ENST00000467263 FXNQ16595 210 aa6.65□□□□□ -1.34
SMC4-207ENST00000467263 FAM26EQ8N5C1 309 aa6.65□□□□□ -1.34
SMC4-207ENST00000467263 CELF2-AS1Q8N7Q2 184 aa6.65□□□□□ -1.34
SMC4-207ENST00000467263 ZNF513Q8N8E2 541 aaPredicted RBP6.65□□□□□ -1.34
SMC4-207ENST00000467263 CPA5Q8WXQ8 436 aa6.65□□□□□ -1.34
SMC4-207ENST00000467263 GORASP1Q9BQQ3 440 aa6.65□□□□□ -1.34
SMC4-207ENST00000467263 ST7Q9NRC1 585 aa6.65□□□□□ -1.34
SMC4-207ENST00000467263 BACE2Q9Y5Z0 518 aa6.65□□□□□ -1.34
SMC4-207ENST00000467263 C7orf72A4D263 438 aa6.64□□□□□ -1.35
SMC4-207ENST00000467263 STK10O94804 968 aaKnown RBP6.64□□□□□ -1.35
SMC4-207ENST00000467263 NTRK1P04629 796 aa6.64□□□□□ -1.35
SMC4-207ENST00000467263 ATP2B1P20020 1258 aa6.64□□□□□ -1.35
SMC4-207ENST00000467263 MAGEA10P43363 369 aaPredicted RBP6.64□□□□□ -1.35
SMC4-207ENST00000467263 SEPHS1P49903 392 aa6.64□□□□□ -1.35
SMC4-207ENST00000467263 GJA9P57773 515 aa6.64□□□□□ -1.35
SMC4-207ENST00000467263 ADAM17P78536 824 aa6.64□□□□□ -1.35
SMC4-207ENST00000467263 WWC2Q6AWC2 1192 aa6.64□□□□□ -1.35
SMC4-207ENST00000467263 STK32CQ86UX6 486 aa6.64□□□□□ -1.35
SMC4-207ENST00000467263 ARHGEF39Q8N4T4 335 aa6.64□□□□□ -1.35
SMC4-207ENST00000467263 NETO2Q8NC67 525 aa6.64□□□□□ -1.35
SMC4-207ENST00000467263 DPF3Q92784 378 aa6.64□□□□□ -1.35
SMC4-207ENST00000467263 PPP1R14AQ96A00 147 aa6.64□□□□□ -1.35
SMC4-207ENST00000467263 PEX11GQ96HA9 241 aa6.64□□□□□ -1.35
SMC4-207ENST00000467263 GPR20Q99678 358 aa6.64□□□□□ -1.35
SMC4-207ENST00000467263 LGR4Q9BXB1 951 aa6.64□□□□□ -1.35
SMC4-207ENST00000467263 PPP1R1BQ9UD71 204 aaPredicted RBP6.64□□□□□ -1.35
SMC4-207ENST00000467263 KLF4O43474 513 aa6.63□□□□□ -1.35
SMC4-207ENST00000467263 GJB6O95452 261 aa6.63□□□□□ -1.35
SMC4-207ENST00000467263 FUCA1P04066 466 aa6.63□□□□□ -1.35
SMC4-207ENST00000467263 GTF2F1P35269 517 aaKnown RBP eCLIP6.63□□□□□ -1.35
SMC4-207ENST00000467263 ZNF827Q17R98 1081 aa6.63□□□□□ -1.35
SMC4-207ENST00000467263 MRM1Q6IN84 353 aaKnown RBP6.63□□□□□ -1.35
SMC4-207ENST00000467263 CABP7Q86V35 215 aa6.63□□□□□ -1.35
SMC4-207ENST00000467263 PLEKHO2Q8TD55 490 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms