RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 BCAS3Q9H6U6 928 aa6.64□□□□□ -1.35
CHMP2B-202ENST00000466696 EMC9Q9Y3B6 208 aa6.64□□□□□ -1.35
CHMP2B-202ENST00000466696 A0A1B0GTL3 188 aa6.63□□□□□ -1.35
CHMP2B-202ENST00000466696 NOP56O00567 594 aaKnown RBP6.63□□□□□ -1.35
CHMP2B-202ENST00000466696 FUCA1P04066 466 aa6.63□□□□□ -1.35
CHMP2B-202ENST00000466696 PLP2Q04941 152 aa6.63□□□□□ -1.35
CHMP2B-202ENST00000466696 NCAPHQ15003 741 aa6.63□□□□□ -1.35
CHMP2B-202ENST00000466696 NT5DC1Q5TFE4 455 aa6.63□□□□□ -1.35
CHMP2B-202ENST00000466696 SMARCC2Q8TAQ2 1214 aa6.63□□□□□ -1.35
CHMP2B-202ENST00000466696 KRTAP4-5Q9BYR2 181 aa6.63□□□□□ -1.35
CHMP2B-202ENST00000466696 TGIF2Q9GZN2 237 aa6.63□□□□□ -1.35
CHMP2B-202ENST00000466696 CLEC1BQ9P126 229 aa6.63□□□□□ -1.35
CHMP2B-202ENST00000466696 APEX2Q9UBZ4 518 aa6.63□□□□□ -1.35
CHMP2B-202ENST00000466696 PLS3P13797 630 aa6.62□□□□□ -1.35
CHMP2B-202ENST00000466696 DLX2Q07687 328 aaPredicted RBP6.62□□□□□ -1.35
CHMP2B-202ENST00000466696 SCRN1Q12765 414 aa6.62□□□□□ -1.35
CHMP2B-202ENST00000466696 RTP5Q14D33 572 aa6.62□□□□□ -1.35
CHMP2B-202ENST00000466696 UBXN11Q5T124 520 aa6.62□□□□□ -1.35
CHMP2B-202ENST00000466696 DCP2Q8IU60 420 aaKnown RBP6.62□□□□□ -1.35
CHMP2B-202ENST00000466696 CARFQ8N187 725 aa6.62□□□□□ -1.35
CHMP2B-202ENST00000466696 FAM169BQ8N8A8 192 aa6.62□□□□□ -1.35
CHMP2B-202ENST00000466696 BORCS6Q96GS4 357 aa6.62□□□□□ -1.35
CHMP2B-202ENST00000466696 BDH2Q9BUT1 245 aa6.62□□□□□ -1.35
CHMP2B-202ENST00000466696 INPP5FQ9Y2H2 1132 aa6.62□□□□□ -1.35
CHMP2B-202ENST00000466696 PRICKLE3O43900 615 aaPredicted RBP6.61□□□□□ -1.35
CHMP2B-202ENST00000466696 NTRK1P04629 796 aa6.61□□□□□ -1.35
CHMP2B-202ENST00000466696 ADRB1P08588 477 aa6.61□□□□□ -1.35
CHMP2B-202ENST00000466696 SPATS1Q496A3 300 aa6.61□□□□□ -1.35
CHMP2B-202ENST00000466696 TTLL7Q6ZT98 887 aa6.61□□□□□ -1.35
CHMP2B-202ENST00000466696 ANAPC16Q96DE5 110 aa6.61□□□□□ -1.35
CHMP2B-202ENST00000466696 PCDH18Q9HCL0 1135 aa6.61□□□□□ -1.35
CHMP2B-202ENST00000466696 GPRC5CQ9NQ84 441 aa6.61□□□□□ -1.35
CHMP2B-202ENST00000466696 CYP26B1Q9NR63 512 aa6.61□□□□□ -1.35
CHMP2B-202ENST00000466696 NTMQ9P121 344 aa6.61□□□□□ -1.35
CHMP2B-202ENST00000466696 CNOT11Q9UKZ1 510 aaKnown RBP6.61□□□□□ -1.35
CHMP2B-202ENST00000466696 CYP2C8P10632 490 aa6.6□□□□□ -1.35
CHMP2B-202ENST00000466696 SARSP49591 514 aaKnown RBP6.6□□□□□ -1.35
CHMP2B-202ENST00000466696 GJA9P57773 515 aa6.6□□□□□ -1.35
CHMP2B-202ENST00000466696 IQCEQ6IPM2 695 aa6.6□□□□□ -1.35
CHMP2B-202ENST00000466696 TRIM59Q8IWR1 403 aa6.6□□□□□ -1.35
CHMP2B-202ENST00000466696 PLEKHO2Q8TD55 490 aa6.6□□□□□ -1.35
CHMP2B-202ENST00000466696 ZBTB8AQ96BR9 441 aa6.6□□□□□ -1.35
CHMP2B-202ENST00000466696 AP5M1Q9H0R1 490 aa6.6□□□□□ -1.35
CHMP2B-202ENST00000466696 ACBD3Q9H3P7 528 aa6.6□□□□□ -1.35
CHMP2B-202ENST00000466696 CCSER2Q9H7U1 834 aa6.6□□□□□ -1.35
CHMP2B-202ENST00000466696 MARCH2Q9P0N8 246 aa6.6□□□□□ -1.35
CHMP2B-202ENST00000466696 NOBOXO60393 691 aa6.59□□□□□ -1.35
CHMP2B-202ENST00000466696 THBDP07204 575 aa6.59□□□□□ -1.35
CHMP2B-202ENST00000466696 EFEMP1Q12805 493 aa6.59□□□□□ -1.35
CHMP2B-202ENST00000466696 MBLAC2Q68D91 279 aa6.59□□□□□ -1.35
CHMP2B-202ENST00000466696 GTF2IRD2BQ6EKJ0 949 aa6.59□□□□□ -1.35
CHMP2B-202ENST00000466696 ETV3LQ6ZN32 361 aa6.59□□□□□ -1.35
CHMP2B-202ENST00000466696 GTF2IRD2Q86UP8 949 aa6.59□□□□□ -1.35
CHMP2B-202ENST00000466696 LINC00482Q8N8I6 264 aa6.59□□□□□ -1.35
CHMP2B-202ENST00000466696 DPF3Q92784 378 aa6.59□□□□□ -1.35
CHMP2B-202ENST00000466696 PPP1R14AQ96A00 147 aa6.59□□□□□ -1.35
CHMP2B-202ENST00000466696 NOX5Q96PH1 765 aa6.59□□□□□ -1.35
CHMP2B-202ENST00000466696 NKX2-4Q9H2Z4 354 aa6.59□□□□□ -1.35
CHMP2B-202ENST00000466696 JAG2Q9Y219 1238 aa6.59□□□□□ -1.35
CHMP2B-202ENST00000466696 SIT1Q9Y3P8 196 aa6.59□□□□□ -1.35
CHMP2B-202ENST00000466696 SMARCA5O60264 1052 aaPredicted RBP6.58□□□□□ -1.36
CHMP2B-202ENST00000466696 NFKB2Q00653 900 aa6.58□□□□□ -1.36
CHMP2B-202ENST00000466696 DDX11Q96FC9 970 aa6.58□□□□□ -1.36
CHMP2B-202ENST00000466696 MRGPRX3Q96LB0 322 aa6.58□□□□□ -1.36
CHMP2B-202ENST00000466696 SPATA6Q9NWH7 488 aaPredicted RBP6.58□□□□□ -1.36
CHMP2B-202ENST00000466696 KIAA1522Q9P206 1035 aaPredicted RBP6.58□□□□□ -1.36
CHMP2B-202ENST00000466696 C22orf46C9J442 243 aa6.57□□□□□ -1.36
CHMP2B-202ENST00000466696 K7ESM1 405 aa6.57□□□□□ -1.36
CHMP2B-202ENST00000466696 ATF4P18848 351 aaPredicted RBP6.57□□□□□ -1.36
CHMP2B-202ENST00000466696 E4F1Q66K89 784 aaPredicted RBP6.57□□□□□ -1.36
CHMP2B-202ENST00000466696 FERMT3Q86UX7 667 aa6.57□□□□□ -1.36
CHMP2B-202ENST00000466696 TEX2Q8IWB9 1127 aa6.57□□□□□ -1.36
CHMP2B-202ENST00000466696 SEC14L1Q92503 715 aa6.57□□□□□ -1.36
CHMP2B-202ENST00000466696 LNPKQ9C0E8 428 aa6.57□□□□□ -1.36
CHMP2B-202ENST00000466696 BTG4Q9NY30 223 aa6.57□□□□□ -1.36
CHMP2B-202ENST00000466696 C8BP07358 591 aa6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 SLC6A11P48066 632 aa6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 KRTAP10-2P60368 255 aa6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 RPL11P62913 178 aaKnown RBP6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 SMAD4Q13485 552 aaKnown RBP6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 INF2Q27J81 1249 aa6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 TNNI3KQ59H18 835 aa6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 MROH9Q5TGP6 573 aa6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 ZC3H18Q86VM9 953 aaKnown RBP6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 ZNF761Q86XN6 746 aaPredicted RBP6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 MIB1Q86YT6 1006 aa6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 RIOX2Q8IUF8 465 aa6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 NPLOC4Q8TAT6 608 aa6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 FRS2Q8WU20 508 aa6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 DDX1Q92499 740 aaKnown RBP6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 GORASP1Q9BQQ3 440 aa6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 C11orf84Q9BUA3 381 aaPredicted RBP6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 TIMM13Q9Y5L4 95 aaPredicted RBP6.56□□□□□ -1.36
CHMP2B-202ENST00000466696 SGSM2O43147 1006 aa6.55□□□□□ -1.36
CHMP2B-202ENST00000466696 HOXC12P31275 282 aa6.55□□□□□ -1.36
CHMP2B-202ENST00000466696 CNR2P34972 360 aa6.55□□□□□ -1.36
CHMP2B-202ENST00000466696 GTF2A2P52657 109 aa6.55□□□□□ -1.36
CHMP2B-202ENST00000466696 VPS37DQ86XT2 251 aa6.55□□□□□ -1.36
CHMP2B-202ENST00000466696 ADAMTS17Q8TE56 1095 aa6.55□□□□□ -1.36
CHMP2B-202ENST00000466696 CAPN10Q9HC96 672 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms