RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 OPTNQ96CV9 577 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 MAP3K14Q99558 947 aa17.3■□□□□ 0.36
SNED1-208ENST00000466618 F5H6K3 240 aa17.29■□□□□ 0.36
SNED1-208ENST00000466618 IRF6O14896 467 aa17.29■□□□□ 0.36
SNED1-208ENST00000466618 CCT2P78371 535 aaKnown RBP17.29■□□□□ 0.36
SNED1-208ENST00000466618 KLRC3Q07444 240 aa17.29■□□□□ 0.36
SNED1-208ENST00000466618 PPIL2Q13356 520 aa17.29■□□□□ 0.36
SNED1-208ENST00000466618 MYL10Q9BUA6 226 aa17.29■□□□□ 0.36
SNED1-208ENST00000466618 SH2D4AQ9H788 454 aa17.29■□□□□ 0.36
SNED1-208ENST00000466618 VCPKMTQ9H867 229 aa17.29■□□□□ 0.36
SNED1-208ENST00000466618 ABCB6Q9NP58 842 aa17.29■□□□□ 0.36
SNED1-208ENST00000466618 KCNH4Q9UQ05 1017 aa17.29■□□□□ 0.36
SNED1-208ENST00000466618 EIF3JO75822 258 aaKnown RBP17.29■□□□□ 0.36
SNED1-208ENST00000466618 MYL5Q02045 173 aa17.29■□□□□ 0.36
SNED1-208ENST00000466618 STK38Q15208 465 aa17.29■□□□□ 0.36
SNED1-208ENST00000466618 SH3D19Q5HYK7 790 aa17.29■□□□□ 0.36
SNED1-208ENST00000466618 WWC2Q6AWC2 1192 aa17.29■□□□□ 0.36
SNED1-208ENST00000466618 CCDC12Q8WUD4 166 aaPredicted RBP17.29■□□□□ 0.36
SNED1-208ENST00000466618 OTUD5Q96G74 571 aa17.29■□□□□ 0.36
SNED1-208ENST00000466618 NCOA5Q9HCD5 579 aaKnown RBP17.29■□□□□ 0.36
SNED1-208ENST00000466618 TRIM75PA6NK02 468 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 ZBTB43O43298 467 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 STX10O60499 249 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 PDHBP11177 359 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 MTMR2Q13614 643 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 SWT1Q5T5J6 900 aaKnown RBP17.28■□□□□ 0.36
SNED1-208ENST00000466618 RASGRP2Q7LDG7 609 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 TC2NQ8N9U0 490 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 CNNM3Q8NE01 707 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 KCNG4Q8TDN1 519 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 GMCL1Q96IK5 515 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 HHIPL1Q96JK4 782 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 DEF6Q9H4E7 631 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 EMILIN3Q9NT22 766 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 FAM217BQ9NTX9 383 aaPredicted RBP17.28■□□□□ 0.36
SNED1-208ENST00000466618 TUBE1Q9UJT0 475 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 GOLGA8BA8MQT2 603 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 C19orf81C9J6K1 198 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 CXCL11O14625 94 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 NDUFB10O96000 172 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 CALM1P0DP23 149 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 CALM2P0DP24 149 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 CALM3P0DP25 149 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 KARSQ15046 597 aaKnown RBP17.28■□□□□ 0.36
SNED1-208ENST00000466618 FAM71BQ8TC56 605 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 C12orf42Q96LP6 360 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 MRPL44Q9H9J2 332 aaKnown RBP17.28■□□□□ 0.36
SNED1-208ENST00000466618 GOPCQ9HD26 462 aa17.28■□□□□ 0.36
SNED1-208ENST00000466618 PHIPQ8WWQ0 1821 aa17.27■□□□□ 0.36
SNED1-208ENST00000466618 YEATS4O95619 227 aa17.27■□□□□ 0.36
SNED1-208ENST00000466618 FDPSP14324 419 aaKnown RBP17.27■□□□□ 0.36
SNED1-208ENST00000466618 PFKFB1P16118 471 aa17.27■□□□□ 0.36
SNED1-208ENST00000466618 RXRAP19793 462 aa17.27■□□□□ 0.36
SNED1-208ENST00000466618 APLP1P51693 650 aa17.27■□□□□ 0.36
SNED1-208ENST00000466618 SLFN13Q68D06 897 aa17.27■□□□□ 0.36
SNED1-208ENST00000466618 SYNE3Q6ZMZ3 975 aa17.27■□□□□ 0.36
SNED1-208ENST00000466618 MMS22LQ6ZRQ5 1243 aa17.27■□□□□ 0.36
SNED1-208ENST00000466618 MICU3Q86XE3 530 aa17.27■□□□□ 0.36
SNED1-208ENST00000466618 RAB11FIP4Q86YS3 637 aa17.27■□□□□ 0.36
SNED1-208ENST00000466618 EFCAB13Q8IY85 973 aa17.27■□□□□ 0.36
SNED1-208ENST00000466618 FANCBQ8NB91 859 aa17.27■□□□□ 0.36
SNED1-208ENST00000466618 WNK4Q96J92 1243 aa17.27■□□□□ 0.36
SNED1-208ENST00000466618 DESI2Q9BSY9 194 aa17.27■□□□□ 0.36
SNED1-208ENST00000466618 IRX2Q9BZI1 471 aaPredicted RBP17.27■□□□□ 0.36
SNED1-208ENST00000466618 PLEKHA4Q9H4M7 779 aa17.27■□□□□ 0.36
SNED1-208ENST00000466618 POLR3EQ9NVU0 708 aa17.27■□□□□ 0.36
SNED1-208ENST00000466618 A0A0G2JLL6 359 aaPredicted RBP17.26■□□□□ 0.35
SNED1-208ENST00000466618 POTEB2H3BUK9 544 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 SPTLC2O15270 562 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 USP14P54578 494 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 DGKZQ13574 1117 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 GRM4Q14833 912 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 SF3A1Q15459 793 aaKnown RBP17.26■□□□□ 0.35
SNED1-208ENST00000466618 AXDND1Q5T1B0 1012 aaPredicted RBP17.26■□□□□ 0.35
SNED1-208ENST00000466618 SPRYD7Q5W111 196 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 MCTP2Q6DN12 878 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 RGMBQ6NW40 437 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 PRRT2Q7Z6L0 340 aaPredicted RBP17.26■□□□□ 0.35
SNED1-208ENST00000466618 LPAR1Q92633 364 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 PUF60Q9UHX1 559 aaKnown RBP17.26■□□□□ 0.35
SNED1-208ENST00000466618 MAD2L2Q9UI95 211 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 PALM3A6NDB9 673 aaPredicted RBP17.26■□□□□ 0.35
SNED1-208ENST00000466618 ZBTB48P10074 688 aaPredicted RBP17.26■□□□□ 0.35
SNED1-208ENST00000466618 CDC27P30260 824 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 METAP2P50579 478 aaKnown RBP eCLIP17.26■□□□□ 0.35
SNED1-208ENST00000466618 MOGSQ13724 837 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 CASP8Q14790 479 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 ZYXQ15942 572 aaKnown RBP17.26■□□□□ 0.35
SNED1-208ENST00000466618 E2F4Q16254 413 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 USP17L2Q6R6M4 530 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 TADA2BQ86TJ2 420 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 GPATCH11Q8N954 259 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 NUP133Q8WUM0 1156 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 DCAF4Q8WV16 495 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 CREBZFQ9NS37 354 aa17.26■□□□□ 0.35
SNED1-208ENST00000466618 PPFIA4O75335 1185 aa17.25■□□□□ 0.35
SNED1-208ENST00000466618 ERLIN1O75477 346 aa17.25■□□□□ 0.35
SNED1-208ENST00000466618 HMGCS2P54868 508 aa17.25■□□□□ 0.35
SNED1-208ENST00000466618 GSCP56915 257 aaPredicted RBP17.25■□□□□ 0.35
SNED1-208ENST00000466618 PPP2R5BQ15173 497 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms