RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 NOA1Q8NC60 698 aaKnown RBP11.62□□□□□ -0.55
UFD1-206ENST00000466373 MAGEF1Q9HAY2 307 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 KCNQ5Q9NR82 932 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 FAM207AQ9NSI2 230 aaPredicted RBP11.62□□□□□ -0.55
UFD1-206ENST00000466373 PCDHAC2Q9Y5I4 1007 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 AFF2P51816 1311 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 RCCD1A6NED2 376 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 TMEM266Q2M3C6 531 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 ASPRV1Q53RT3 343 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 CAPZA3Q96KX2 299 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 LACRTQ9GZZ8 138 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 MYO6Q9UM54 1294 aa11.62□□□□□ -0.55
UFD1-206ENST00000466373 MACROD2A1Z1Q3 448 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 CTAGE15A4D2H0 777 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 G3V3G9 751 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 CTAGE8P0CG41 777 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 HOXA10P31260 410 aaPredicted RBP11.61□□□□□ -0.55
UFD1-206ENST00000466373 GYS2P54840 703 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 ECM1Q16610 540 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 DCAF8Q5TAQ9 597 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 KRT26Q7Z3Y9 468 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 CTAGE6Q86UF2 777 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 CTAGE4Q8IX94 777 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 FUT8Q9BYC5 575 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 TTYH3Q9C0H2 523 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 NHEJ1Q9H9Q4 299 aaPredicted RBP11.61□□□□□ -0.55
UFD1-206ENST00000466373 ZNHIT6Q9NWK9 470 aaKnown RBP11.61□□□□□ -0.55
UFD1-206ENST00000466373 TBC1D7Q9P0N9 293 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 THSD7AQ9UPZ6 1657 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 EPHB6O15197 1021 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 ATP1A1P05023 1023 aaKnown RBP11.61□□□□□ -0.55
UFD1-206ENST00000466373 OAS2P29728 719 aaKnown RBP11.61□□□□□ -0.55
UFD1-206ENST00000466373 SHMT1P34896 483 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 NOVP48745 357 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 ZNF543Q08ER8 600 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 RAD51AP2Q09MP3 1159 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 SMC1AQ14683 1233 aaKnown RBP11.61□□□□□ -0.55
UFD1-206ENST00000466373 KRT79Q5XKE5 535 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 NOC3LQ8WTT2 800 aaKnown RBP11.61□□□□□ -0.55
UFD1-206ENST00000466373 ESYT2A0FGR8 921 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 USP17L15C9J2P7 530 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 USP17L13C9JLJ4 530 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 USP17L11C9JVI0 530 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 USP17L18D6R9N7 530 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 USP17L22D6RA61 530 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 USP17L17D6RBQ6 530 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 USP17L19D6RCP7 530 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 USP17L20D6RJB6 530 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 KIF20AO95235 890 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 SMARCA1P28370 1054 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 USP17L24Q0WX57 530 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 CDC42EP5Q6NZY7 148 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 USP17L6PQ6QN14 398 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 CCDC155Q8N6L0 562 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 DDX12PQ92771 950 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 CRAMP1Q96RY5 1269 aa11.61□□□□□ -0.55
UFD1-206ENST00000466373 DDX25Q9UHL0 483 aaKnown RBP11.61□□□□□ -0.55
UFD1-206ENST00000466373 CCDC151A5D8V7 595 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 CACNB1Q02641 598 aaPredicted RBP11.6□□□□□ -0.55
UFD1-206ENST00000466373 FKBP15Q5T1M5 1219 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 FAM114A1Q8IWE2 563 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 JAKMIP2Q96AA8 810 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 MMRN2Q9H8L6 949 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 DBNDD1Q9H9R9 158 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 PNMA6FA0A0J9YX94 578 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 IPO7O95373 1038 aaKnown RBP11.6□□□□□ -0.55
UFD1-206ENST00000466373 SNHG28P0DPA3 235 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 FXR2P51116 673 aaKnown RBP eCLIP11.6□□□□□ -0.55
UFD1-206ENST00000466373 SNAP25P60880 206 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 VSNL1P62760 191 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 AMPD2Q01433 879 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 SP8Q8IXZ3 490 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 COA1Q9GZY4 146 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 HAUS4Q9H6D7 363 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 ABCB6Q9NP58 842 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 MYO1AQ9UBC5 1043 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 ATP6V0A2Q9Y487 856 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 UBR3Q6ZT12 1888 aa11.6□□□□□ -0.55
UFD1-206ENST00000466373 ZBED6P86452 979 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 CENPPQ6IPU0 288 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 UNC13DQ70J99 1090 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 C2CD5Q86YS7 1000 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 KIAA0825Q8IV33 1275 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 SMCR8Q8TEV9 937 aaPredicted RBP11.59□□□□□ -0.55
UFD1-206ENST00000466373 RAD54LQ92698 747 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 HAS1Q92839 578 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 CUL5Q93034 780 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 DRC1Q96MC2 740 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 HINFPQ9BQA5 517 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 RAB34Q9BZG1 259 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 TANGO6Q9C0B7 1094 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 PSTPIP2Q9H939 334 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 KANSL2Q9H9L4 492 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 ZNF219Q9P2Y4 722 aaPredicted RBP11.59□□□□□ -0.55
UFD1-206ENST00000466373 IGKV6D-41A0A0C4DH26 115 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 CYLC1P35663 651 aaPredicted RBP11.59□□□□□ -0.55
UFD1-206ENST00000466373 RBM5P52756 815 aaKnown RBP eCLIP11.59□□□□□ -0.55
UFD1-206ENST00000466373 MEA1Q16626 185 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 WHAMMP3Q1A5X7 153 aa11.59□□□□□ -0.55
UFD1-206ENST00000466373 ZSCAN29Q8IWY8 852 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms