RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 TMTC3Q6ZXV5 915 aa11.78□□□□□ -0.52
CD40-204ENST00000466205 SGMS1Q86VZ5 419 aa11.78□□□□□ -0.52
CD40-204ENST00000466205 RGS22Q8NE09 1264 aa11.78□□□□□ -0.52
CD40-204ENST00000466205 DNERQ8NFT8 737 aa11.78□□□□□ -0.52
CD40-204ENST00000466205 GPKOWQ92917 476 aaPredicted RBP eCLIP11.78□□□□□ -0.52
CD40-204ENST00000466205 KCNB2Q92953 911 aa11.78□□□□□ -0.52
CD40-204ENST00000466205 BRF1Q92994 677 aa11.78□□□□□ -0.52
CD40-204ENST00000466205 MPHOSPH6Q99547 160 aaKnown RBP11.78□□□□□ -0.52
CD40-204ENST00000466205 MAP3K14Q99558 947 aa11.78□□□□□ -0.52
CD40-204ENST00000466205 LARP6Q9BRS8 491 aaKnown RBP11.78□□□□□ -0.52
CD40-204ENST00000466205 SPZ1Q9BXG8 430 aa11.78□□□□□ -0.52
CD40-204ENST00000466205 AP5M1Q9H0R1 490 aa11.78□□□□□ -0.52
CD40-204ENST00000466205 PXMP2Q9NR77 195 aa11.78□□□□□ -0.52
CD40-204ENST00000466205 RBM27Q9P2N5 1060 aaKnown RBP11.78□□□□□ -0.52
CD40-204ENST00000466205 GNEQ9Y223 722 aaKnown RBP11.78□□□□□ -0.52
CD40-204ENST00000466205 GCOM1H8Y6P7 765 aaPredicted RBP11.77□□□□□ -0.53
CD40-204ENST00000466205 CTAGE5O15320 804 aa11.77□□□□□ -0.53
CD40-204ENST00000466205 HMGB1P09429 215 aaKnown RBP11.77□□□□□ -0.53
CD40-204ENST00000466205 POLR2MP0CAP2 368 aa11.77□□□□□ -0.53
CD40-204ENST00000466205 RPS6KB1P23443 525 aa11.77□□□□□ -0.53
CD40-204ENST00000466205 CDC27P30260 824 aa11.77□□□□□ -0.53
CD40-204ENST00000466205 GNAQP50148 359 aa11.77□□□□□ -0.53
CD40-204ENST00000466205 HSD17B4P51659 736 aa11.77□□□□□ -0.53
CD40-204ENST00000466205 PPP2R5BQ15173 497 aa11.77□□□□□ -0.53
CD40-204ENST00000466205 IQSEC1Q6DN90 963 aa11.77□□□□□ -0.53
CD40-204ENST00000466205 CCSAPQ6IQ19 270 aaPredicted RBP11.77□□□□□ -0.53
CD40-204ENST00000466205 CXCL17Q6UXB2 119 aa11.77□□□□□ -0.53
CD40-204ENST00000466205 HEATR3Q7Z4Q2 680 aa11.77□□□□□ -0.53
CD40-204ENST00000466205 OR6J1Q8NGC5 347 aa11.77□□□□□ -0.53
CD40-204ENST00000466205 IL31RAQ8NI17 732 aa11.77□□□□□ -0.53
CD40-204ENST00000466205 NSUN6Q8TEA1 469 aaKnown RBP11.77□□□□□ -0.53
CD40-204ENST00000466205 PPP1R13LQ8WUF5 828 aa11.77□□□□□ -0.53
CD40-204ENST00000466205 USP26Q9BXU7 913 aa11.77□□□□□ -0.53
CD40-204ENST00000466205 UPF3AQ9H1J1 476 aaKnown RBP11.77□□□□□ -0.53
CD40-204ENST00000466205 CNTNAP5Q8WYK1 1306 aa11.77□□□□□ -0.53
CD40-204ENST00000466205 MOXD2PA6NHM9 499 aa11.76□□□□□ -0.53
CD40-204ENST00000466205 MYL3P08590 195 aa11.76□□□□□ -0.53
CD40-204ENST00000466205 TXNP10599 105 aaKnown RBP11.76□□□□□ -0.53
CD40-204ENST00000466205 MAGEA10P43363 369 aaPredicted RBP11.76□□□□□ -0.53
CD40-204ENST00000466205 METAP2P50579 478 aaKnown RBP eCLIP11.76□□□□□ -0.53
CD40-204ENST00000466205 CHMP4BP1P59074 171 aa11.76□□□□□ -0.53
CD40-204ENST00000466205 PSMC6P62333 389 aa11.76□□□□□ -0.53
CD40-204ENST00000466205 STXBP2Q15833 593 aa11.76□□□□□ -0.53
CD40-204ENST00000466205 FSCN1Q16658 493 aaKnown RBP11.76□□□□□ -0.53
CD40-204ENST00000466205 UBE2SQ16763 222 aa11.76□□□□□ -0.53
CD40-204ENST00000466205 LY6KQ17RY6 165 aa11.76□□□□□ -0.53
CD40-204ENST00000466205 DUSP28Q4G0W2 176 aa11.76□□□□□ -0.53
CD40-204ENST00000466205 HABP4Q5JVS0 413 aaKnown RBP11.76□□□□□ -0.53
CD40-204ENST00000466205 USP17L6PQ6QN14 398 aa11.76□□□□□ -0.53
CD40-204ENST00000466205 SH3RF1Q7Z6J0 888 aa11.76□□□□□ -0.53
CD40-204ENST00000466205 PCSK9Q8NBP7 692 aaKnown RBP11.76□□□□□ -0.53
CD40-204ENST00000466205 SMARCC2Q8TAQ2 1214 aa11.76□□□□□ -0.53
CD40-204ENST00000466205 GLT1D1Q96MS3 346 aa11.76□□□□□ -0.53
CD40-204ENST00000466205 LZTS2Q9BRK4 669 aa11.76□□□□□ -0.53
CD40-204ENST00000466205 UPF3BQ9BZI7 483 aaKnown RBP11.76□□□□□ -0.53
CD40-204ENST00000466205 RBM28Q9NW13 759 aaKnown RBP11.76□□□□□ -0.53
CD40-204ENST00000466205 BAZ2BQ9UIF8 2168 aaKnown RBP11.75□□□□□ -0.53
CD40-204ENST00000466205 B4DLN1 442 aa11.75□□□□□ -0.53
CD40-204ENST00000466205 NR3C2P08235 984 aa11.75□□□□□ -0.53
CD40-204ENST00000466205 PSMA5P28066 241 aa11.75□□□□□ -0.53
CD40-204ENST00000466205 CST5P28325 142 aaPredicted RBP11.75□□□□□ -0.53
CD40-204ENST00000466205 ADD1P35611 737 aaKnown RBP11.75□□□□□ -0.53
CD40-204ENST00000466205 MRPL12P52815 198 aaKnown RBP11.75□□□□□ -0.53
CD40-204ENST00000466205 CCT2P78371 535 aaKnown RBP11.75□□□□□ -0.53
CD40-204ENST00000466205 TLE2Q04725 743 aa11.75□□□□□ -0.53
CD40-204ENST00000466205 SNX17Q15036 470 aa11.75□□□□□ -0.53
CD40-204ENST00000466205 PGM5Q15124 567 aa11.75□□□□□ -0.53
CD40-204ENST00000466205 PDCD2LQ9BRP1 358 aa11.75□□□□□ -0.53
CD40-204ENST00000466205 TSEN34Q9BSV6 310 aaKnown RBP11.75□□□□□ -0.53
CD40-204ENST00000466205 PRKAG2Q9UGJ0 569 aa11.75□□□□□ -0.53
CD40-204ENST00000466205 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
CD40-204ENST00000466205 LOC102724159A0A0B4J2E5 919 aa11.74□□□□□ -0.53
CD40-204ENST00000466205 RBM47A0AV96 593 aaKnown RBP11.74□□□□□ -0.53
CD40-204ENST00000466205 TRIM43BA6NCK2 446 aa11.74□□□□□ -0.53
CD40-204ENST00000466205 SMARCA1P28370 1054 aa11.74□□□□□ -0.53
CD40-204ENST00000466205 TTLL4Q14679 1199 aa11.74□□□□□ -0.53
CD40-204ENST00000466205 PWP2Q15269 919 aaKnown RBP11.74□□□□□ -0.53
CD40-204ENST00000466205 WWC2Q6AWC2 1192 aa11.74□□□□□ -0.53
CD40-204ENST00000466205 RUFY3Q7L099 469 aa11.74□□□□□ -0.53
CD40-204ENST00000466205 SCFD2Q8WU76 684 aa11.74□□□□□ -0.53
CD40-204ENST00000466205 TRIM43Q96BQ3 446 aaPredicted RBP11.74□□□□□ -0.53
CD40-204ENST00000466205 PGBD1Q96JS3 809 aa11.74□□□□□ -0.53
CD40-204ENST00000466205 IWS1Q96ST2 819 aa11.74□□□□□ -0.53
CD40-204ENST00000466205 PDLIM7Q9NR12 457 aa11.74□□□□□ -0.53
CD40-204ENST00000466205 FAM217BQ9NTX9 383 aaPredicted RBP11.74□□□□□ -0.53
CD40-204ENST00000466205 RTEL1Q9NZ71 1219 aa11.74□□□□□ -0.53
CD40-204ENST00000466205 MRVI1Q9Y6F6 885 aa11.74□□□□□ -0.53
CD40-204ENST00000466205 A0A0U1RQG5 324 aaPredicted RBP11.73□□□□□ -0.53
CD40-204ENST00000466205 MEIS2O14770 477 aa11.73□□□□□ -0.53
CD40-204ENST00000466205 ZEB2O60315 1214 aa11.73□□□□□ -0.53
CD40-204ENST00000466205 DTNBO60941 627 aa11.73□□□□□ -0.53
CD40-204ENST00000466205 SEC24BO95487 1268 aa11.73□□□□□ -0.53
CD40-204ENST00000466205 CLTBP09497 229 aa11.73□□□□□ -0.53
CD40-204ENST00000466205 CCND2P30279 289 aa11.73□□□□□ -0.53
CD40-204ENST00000466205 NAPAP54920 295 aa11.73□□□□□ -0.53
CD40-204ENST00000466205 GHRHRQ02643 423 aa11.73□□□□□ -0.53
CD40-204ENST00000466205 TRAF1Q13077 416 aa11.73□□□□□ -0.53
CD40-204ENST00000466205 STK3Q13188 491 aa11.73□□□□□ -0.53
CD40-204ENST00000466205 TOB2Q14106 344 aaPredicted RBP11.73□□□□□ -0.53
CD40-204ENST00000466205 TYW1BQ6NUM6 668 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms