RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	PTPN23	Q9H3S7	1636 aa		7.27	□□□□□ -1.25
CACNA1C-223	ENST00000465278		A0A087WZG4	1122 aa		7.27	□□□□□ -1.25
CACNA1C-223	ENST00000465278	TBX1	O43435	398 aa		7.27	□□□□□ -1.25
CACNA1C-223	ENST00000465278	KCNH1	O95259	989 aa		7.27	□□□□□ -1.25
CACNA1C-223	ENST00000465278	NAT2	P11245	290 aa		7.27	□□□□□ -1.25
CACNA1C-223	ENST00000465278	PRKCQ	Q04759	706 aa		7.27	□□□□□ -1.25
CACNA1C-223	ENST00000465278	CRTC3	Q6UUV7	619 aa		7.27	□□□□□ -1.25
CACNA1C-223	ENST00000465278	ZNF655	Q8N720	491 aa	Predicted RBP	7.27	□□□□□ -1.25
CACNA1C-223	ENST00000465278	RCC1L	Q96I51	464 aa	Known RBP	7.27	□□□□□ -1.25
CACNA1C-223	ENST00000465278	CGGBP1	Q9UFW8	167 aa	Predicted RBP	7.27	□□□□□ -1.25
CACNA1C-223	ENST00000465278	DUSP13	Q9UII6	198 aa		7.27	□□□□□ -1.25
CACNA1C-223	ENST00000465278		A0A1W2PQU0	124 aa		7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	SSU72P8	A0A1W2PR75	194 aa		7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	AGRP	O00253	132 aa		7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	SYP	P08247	313 aa		7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	FAM153B	P0C7A2	387 aa		7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	GRIA2	P42262	883 aa		7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	NBPF8	Q3BBV2	869 aa		7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	ZNF574	Q6ZN55	896 aa	Predicted RBP	7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	NOP9	Q86U38	636 aa	Known RBP	7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	BCL7C	Q8WUZ0	217 aa	Predicted RBP	7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	ASB11	Q8WXH4	323 aa		7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	SPATA9	Q9BWV2	254 aa		7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	FOXP3	Q9BZS1	431 aa		7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	KANSL2	Q9H9L4	492 aa		7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	SF3B6	Q9Y3B4	125 aa	Known RBP	7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	EMC9	Q9Y3B6	208 aa		7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	PCDHA11	Q9Y5I1	949 aa		7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	ABCC5	O15440	1437 aa		7.26	□□□□□ -1.25
CACNA1C-223	ENST00000465278	FKTN	O75072	461 aa		7.25	□□□□□ -1.25
CACNA1C-223	ENST00000465278	ESR1	P03372	595 aa		7.25	□□□□□ -1.25
CACNA1C-223	ENST00000465278	CD8B	P10966	210 aa		7.25	□□□□□ -1.25
CACNA1C-223	ENST00000465278	IKZF1	Q13422	519 aa		7.25	□□□□□ -1.25
CACNA1C-223	ENST00000465278	GPR162	Q16538	588 aa		7.25	□□□□□ -1.25
CACNA1C-223	ENST00000465278	GAB4	Q2WGN9	574 aa		7.25	□□□□□ -1.25
CACNA1C-223	ENST00000465278	CWF19L1	Q69YN2	538 aa	Known RBP	7.25	□□□□□ -1.25
CACNA1C-223	ENST00000465278	THAP5	Q7Z6K1	395 aa		7.25	□□□□□ -1.25
CACNA1C-223	ENST00000465278	MRGPRX3	Q96LB0	322 aa		7.25	□□□□□ -1.25
CACNA1C-223	ENST00000465278	EPN3	Q9H201	632 aa		7.25	□□□□□ -1.25
CACNA1C-223	ENST00000465278	SLC5A6	Q9Y289	635 aa		7.25	□□□□□ -1.25
CACNA1C-223	ENST00000465278	GPR55	Q9Y2T6	319 aa	Predicted RBP	7.25	□□□□□ -1.25
CACNA1C-223	ENST00000465278	DCC	P43146	1447 aa		7.25	□□□□□ -1.25
CACNA1C-223	ENST00000465278	FMN1	Q68DA7	1419 aa		7.25	□□□□□ -1.25
CACNA1C-223	ENST00000465278	CDC42BPA	Q5VT25	1732 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	PIK3C2B	O00750	1634 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	ADGRB3	O60242	1522 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	SYCP2	Q9BX26	1530 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	ADAMTS4	O75173	837 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	GSN	P06396	782 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	VAV1	P15498	845 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	CD97	P48960	835 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	PCBP3	P57721	371 aa	Known RBP	7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	PPP2R2A	P63151	447 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	EGR3	Q06889	387 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	SF1	Q15637	639 aa	Known RBP	7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	GTF2IRD2B	Q6EKJ0	949 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	ZPBP2	Q6X784	338 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	GTF2IRD2	Q86UP8	949 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	ZNF227	Q86WZ6	799 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	BTN2A2	Q8WVV5	523 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	MCMBP	Q9BTE3	642 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	CARS2	Q9HA77	564 aa	Known RBP	7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	PRR13	Q9NZ81	148 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	CCDC39	Q9UFE4	941 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	TCFL5	Q9UL49	500 aa		7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	MRPL42	Q9Y6G3	142 aa	Known RBP	7.24	□□□□□ -1.25
CACNA1C-223	ENST00000465278	THSD7A	Q9UPZ6	1657 aa		7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	IQCA1L	A6NCM1	817 aa		7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	CD3E	P07766	207 aa		7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	GSTM1	P09488	218 aa		7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	RPL10	P27635	214 aa	Known RBP	7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	HTRA3	P83110	453 aa		7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	POU4F1	Q01851	419 aa		7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	HSP90AA2P	Q14568	343 aa	Predicted RBP	7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	ZMYM1	Q5SVZ6	1142 aa		7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	YOD1	Q5VVQ6	348 aa	Predicted RBP	7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	POMZP3	Q6PJE2	187 aa		7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	TMPRSS7	Q7RTY8	843 aa		7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	DTX1	Q86Y01	620 aa		7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	TRIM59	Q8IWR1	403 aa		7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	MISP3	Q96FF7	219 aa		7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	RNPC3	Q96LT9	517 aa	Known RBP	7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	FCRL3	Q96P31	734 aa	Predicted RBP	7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	PRDM7	Q9NQW5	492 aa		7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	PCMTD2	Q9NV79	361 aa		7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	MST1R	Q04912	1400 aa		7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	ABCA3	Q99758	1704 aa		7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	ERVK-7	P63135	1459 aa		7.23	□□□□□ -1.25
CACNA1C-223	ENST00000465278	COL24A1	Q17RW2	1714 aa		7.22	□□□□□ -1.25
CACNA1C-223	ENST00000465278	TLDC2	A0PJX2	215 aa		7.22	□□□□□ -1.25
CACNA1C-223	ENST00000465278	SMARCA5	O60264	1052 aa	Predicted RBP	7.22	□□□□□ -1.25
CACNA1C-223	ENST00000465278	L1CAM	P32004	1257 aa		7.22	□□□□□ -1.25
CACNA1C-223	ENST00000465278	NOP2	P46087	812 aa	Known RBP	7.22	□□□□□ -1.25
CACNA1C-223	ENST00000465278	AMPD2	Q01433	879 aa		7.22	□□□□□ -1.25
CACNA1C-223	ENST00000465278	ZP2	Q05996	745 aa		7.22	□□□□□ -1.25
CACNA1C-223	ENST00000465278	FOXB2	Q5VYV0	432 aa		7.22	□□□□□ -1.25
CACNA1C-223	ENST00000465278	JAZF1	Q86VZ6	243 aa		7.22	□□□□□ -1.25
CACNA1C-223	ENST00000465278	LRRC47	Q8N1G4	583 aa	Known RBP	7.22	□□□□□ -1.25
CACNA1C-223	ENST00000465278	LINC00116	Q8NCU8	138 aa		7.22	□□□□□ -1.25
CACNA1C-223	ENST00000465278	SH3TC2	Q8TF17	1288 aa		7.22	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 15 ms