RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 LRRC24Q50LG9 513 aa6.27□□□□□ -1.41
BRCA1-206ENST00000461574 IGF2-ASQ6U949 168 aa6.27□□□□□ -1.41
BRCA1-206ENST00000461574 HFE2Q6ZVN8 426 aa6.27□□□□□ -1.41
BRCA1-206ENST00000461574 CCAR1Q8IX12 1150 aaKnown RBP6.27□□□□□ -1.41
BRCA1-206ENST00000461574 SUCLG2Q96I99 432 aa6.27□□□□□ -1.41
BRCA1-206ENST00000461574 LBHD1Q9BQE6 289 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-206ENST00000461574 SRCIN1Q9C0H9 1055 aa6.27□□□□□ -1.41
BRCA1-206ENST00000461574 BICC1Q9H694 974 aaKnown RBP6.27□□□□□ -1.41
BRCA1-206ENST00000461574 CWC22Q9HCG8 908 aaKnown RBP6.27□□□□□ -1.41
BRCA1-206ENST00000461574 GNL3LQ9NVN8 582 aaKnown RBP6.27□□□□□ -1.41
BRCA1-206ENST00000461574 AGTPBP1Q9UPW5 1226 aa6.27□□□□□ -1.41
BRCA1-206ENST00000461574 DAGLAQ9Y4D2 1042 aa6.27□□□□□ -1.41
BRCA1-206ENST00000461574 IL16Q14005 1332 aa6.26□□□□□ -1.41
BRCA1-206ENST00000461574 MICAL2O94851 1124 aa6.26□□□□□ -1.41
BRCA1-206ENST00000461574 PRDX5P30044 214 aa6.26□□□□□ -1.41
BRCA1-206ENST00000461574 GCLCP48506 637 aaPredicted RBP6.26□□□□□ -1.41
BRCA1-206ENST00000461574 RGS3P49796 1198 aa6.26□□□□□ -1.41
BRCA1-206ENST00000461574 ARSDP51689 593 aa6.26□□□□□ -1.41
BRCA1-206ENST00000461574 GPLD1P80108 840 aa6.26□□□□□ -1.41
BRCA1-206ENST00000461574 EXOSC9Q06265 439 aaKnown RBP6.26□□□□□ -1.41
BRCA1-206ENST00000461574 PICALMQ13492 652 aa6.26□□□□□ -1.41
BRCA1-206ENST00000461574 PDE3AQ14432 1141 aa6.26□□□□□ -1.41
BRCA1-206ENST00000461574 DZIP1Q86YF9 867 aaKnown RBP6.26□□□□□ -1.41
BRCA1-206ENST00000461574 TTC9Q92623 222 aa6.26□□□□□ -1.41
BRCA1-206ENST00000461574 SMG9Q9H0W8 520 aaKnown RBP6.26□□□□□ -1.41
BRCA1-206ENST00000461574 PRKAG2Q9UGJ0 569 aa6.26□□□□□ -1.41
BRCA1-206ENST00000461574 RNF112Q9ULX5 631 aa6.26□□□□□ -1.41
BRCA1-206ENST00000461574 USP20Q9Y2K6 914 aa6.26□□□□□ -1.41
BRCA1-206ENST00000461574 AFG3L2Q9Y4W6 797 aa6.26□□□□□ -1.41
BRCA1-206ENST00000461574 PLXNB2O15031 1838 aa6.26□□□□□ -1.41
BRCA1-206ENST00000461574 KIF16BQ96L93 1317 aa6.25□□□□□ -1.41
BRCA1-206ENST00000461574 CTNND1O60716 968 aaKnown RBP6.25□□□□□ -1.41
BRCA1-206ENST00000461574 ENTPD3O75355 529 aa6.25□□□□□ -1.41
BRCA1-206ENST00000461574 VAMP4O75379 141 aa6.25□□□□□ -1.41
BRCA1-206ENST00000461574 NBPF7P0C2Y1 421 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-206ENST00000461574 ZKSCAN1P17029 563 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-206ENST00000461574 IRX3P78415 501 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-206ENST00000461574 CCDC27Q2M243 656 aa6.25□□□□□ -1.41
BRCA1-206ENST00000461574 TREML2Q5T2D2 321 aa6.25□□□□□ -1.41
BRCA1-206ENST00000461574 CCDC84Q86UT8 332 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-206ENST00000461574 ANKMY2Q8IV38 441 aa6.25□□□□□ -1.41
BRCA1-206ENST00000461574 ZGPATQ8N5A5 531 aaKnown RBP6.25□□□□□ -1.41
BRCA1-206ENST00000461574 KLHDC4Q8TBB5 520 aa6.25□□□□□ -1.41
BRCA1-206ENST00000461574 SOCS4Q8WXH5 440 aa6.25□□□□□ -1.41
BRCA1-206ENST00000461574 TRIB2Q92519 343 aa6.25□□□□□ -1.41
BRCA1-206ENST00000461574 CLUAP1Q96AJ1 413 aa6.25□□□□□ -1.41
BRCA1-206ENST00000461574 PRKRIP1Q9H875 184 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-206ENST00000461574 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.25□□□□□ -1.41
BRCA1-206ENST00000461574 OGDHLQ9ULD0 1010 aa6.25□□□□□ -1.41
BRCA1-206ENST00000461574 SPTBN5Q9NRC6 3674 aaKnown RBP6.25□□□□□ -1.41
BRCA1-206ENST00000461574 ATRNL1Q5VV63 1379 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 USP17L15C9J2P7 530 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 USP17L10C9JJH3 530 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 USP17L13C9JLJ4 530 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 USP17L12C9JPN9 530 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 USP17L11C9JVI0 530 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 USP17L21D6R901 530 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 USP17L18D6R9N7 530 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 USP17L22D6RA61 530 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 USP17L17D6RBQ6 530 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 USP17L19D6RCP7 530 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 USP17L20D6RJB6 530 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 OPLAHO14841 1288 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 ALX3O95076 343 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 EIF2AK2P19525 551 aaKnown RBP6.24□□□□□ -1.41
BRCA1-206ENST00000461574 CYP2B6P20813 491 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 HMGCS2P54868 508 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 USP17L24Q0WX57 530 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 SPP2Q13103 211 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 ATP2B3Q16720 1220 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 PRR23CQ6ZRP0 262 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 ZFPM1Q8IX07 1006 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 VGLL2Q8N8G2 317 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 MAFAQ8NHW3 353 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-206ENST00000461574 LPIN2Q92539 896 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 GUCD1Q96NT3 240 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 PPP1R12CQ9BZL4 782 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 ASCC2Q9H1I8 757 aaPredicted RBP6.24□□□□□ -1.41
BRCA1-206ENST00000461574 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.24□□□□□ -1.41
BRCA1-206ENST00000461574 C11orf16Q9NQ32 467 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 LTBP2Q14767 1821 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 PFASO15067 1338 aa6.24□□□□□ -1.41
BRCA1-206ENST00000461574 DDTLA6NHG4 134 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-206ENST00000461574 FAM196BA6NMK8 535 aa6.23□□□□□ -1.41
BRCA1-206ENST00000461574 WEE1P30291 646 aa6.23□□□□□ -1.41
BRCA1-206ENST00000461574 BTDP43251 543 aa6.23□□□□□ -1.41
BRCA1-206ENST00000461574 NRLP54845 237 aa6.23□□□□□ -1.41
BRCA1-206ENST00000461574 LRRC26Q2I0M4 334 aa6.23□□□□□ -1.41
BRCA1-206ENST00000461574 C11orf91Q3C1V1 193 aa6.23□□□□□ -1.41
BRCA1-206ENST00000461574 RABL6Q3YEC7 729 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-206ENST00000461574 FAM109BQ6ICB4 259 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-206ENST00000461574 KAZALD1Q96I82 304 aa6.23□□□□□ -1.41
BRCA1-206ENST00000461574 IDI2Q9BXS1 227 aa6.23□□□□□ -1.41
BRCA1-206ENST00000461574 SENP6Q9GZR1 1112 aaPredicted RBP6.23□□□□□ -1.41
BRCA1-206ENST00000461574 SIL1Q9H173 461 aa6.23□□□□□ -1.41
BRCA1-206ENST00000461574 AS3MTQ9HBK9 375 aa6.23□□□□□ -1.41
BRCA1-206ENST00000461574 TLR7Q9NYK1 1049 aaKnown RBP6.23□□□□□ -1.41
BRCA1-206ENST00000461574 TMOD4Q9NZQ9 345 aa6.23□□□□□ -1.41
BRCA1-206ENST00000461574 ABCF2Q9UG63 623 aa6.23□□□□□ -1.41
BRCA1-206ENST00000461574 DENND2AQ9ULE3 1009 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms