RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 HOXA13P31271 388 aaPredicted RBP7.66□□□□□ -1.18
MSH2-204ENST00000461394 INPP5BP32019 993 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 EPS15P42566 896 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 MYL5Q02045 173 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 AP3B2Q13367 1082 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 PRKG1Q13976 671 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 DHX8Q14562 1220 aaKnown RBP7.66□□□□□ -1.18
MSH2-204ENST00000461394 TPD52L1Q16890 204 aaPredicted RBP7.66□□□□□ -1.18
MSH2-204ENST00000461394 HS1BP3Q53T59 392 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 KIAA1755Q5JYT7 1200 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 PRAMEF18Q5VWM3 479 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 KLHL10Q6JEL2 608 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 FCHSD1Q86WN1 690 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 TRIML1Q8N9V2 468 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 CCDC97Q96F63 343 aaPredicted RBP7.66□□□□□ -1.18
MSH2-204ENST00000461394 AK8Q96MA6 479 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 TEPSINQ96N21 525 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 WRNIP1Q96S55 665 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 BPIFA3Q9BQP9 254 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 GLIS2Q9BZE0 524 aaPredicted RBP7.66□□□□□ -1.18
MSH2-204ENST00000461394 BLZF1Q9H2G9 400 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 DISC1Q9NRI5 854 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 GINM1Q9NU53 330 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 RMND1Q9NWS8 449 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 LRWD1Q9UFC0 647 aa7.66□□□□□ -1.18
MSH2-204ENST00000461394 MRPL11Q9Y3B7 192 aaKnown RBP7.66□□□□□ -1.18
MSH2-204ENST00000461394 POLR2AP24928 1970 aaKnown RBP7.66□□□□□ -1.18
MSH2-204ENST00000461394 PHF20L1A8MW92 1017 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 GCOM1H8Y6P7 765 aaPredicted RBP7.65□□□□□ -1.18
MSH2-204ENST00000461394 WDR46O15213 610 aaKnown RBP7.65□□□□□ -1.18
MSH2-204ENST00000461394 AP5Z1O43299 807 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 CBFA2T2O43439 604 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 FLOT1O75955 427 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 DDNO94850 711 aaPredicted RBP7.65□□□□□ -1.18
MSH2-204ENST00000461394 ABCB11O95342 1321 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 SERPINC1P01008 464 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 FOSP01100 380 aaPredicted RBP7.65□□□□□ -1.18
MSH2-204ENST00000461394 POLR2MP0CAP2 368 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 PLCG1P19174 1290 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 CDK11BP21127 795 aaKnown RBP7.65□□□□□ -1.18
MSH2-204ENST00000461394 CASP1P29466 404 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 CLK2P49760 499 aaKnown RBP7.65□□□□□ -1.18
MSH2-204ENST00000461394 USP14P54578 494 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 MDM2Q00987 491 aaPredicted RBP7.65□□□□□ -1.18
MSH2-204ENST00000461394 MTMR2Q13614 643 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 HIC1Q14526 733 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 SUPT20HL1Q3ZLR7 823 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 C9orf131Q5VYM1 1079 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 KRT79Q5XKE5 535 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.65□□□□□ -1.18
MSH2-204ENST00000461394 ZSCAN30Q86W11 494 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 SCYL3Q8IZE3 742 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 MLKLQ8NB16 471 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 SNX29Q8TEQ0 813 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 DCPSQ96C86 337 aaKnown RBP7.65□□□□□ -1.18
MSH2-204ENST00000461394 UIMC1Q96RL1 719 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 SLF1Q9BQI6 1058 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 CCSER1Q9C0I3 900 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 RANBP17Q9H2T7 1088 aaKnown RBP7.65□□□□□ -1.18
MSH2-204ENST00000461394 PGAP2Q9UHJ9 254 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 CCPG1Q9ULG6 757 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 PPP2R3BQ9Y5P8 575 aa7.65□□□□□ -1.18
MSH2-204ENST00000461394 PHIPQ8WWQ0 1821 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 SYNRGQ9UMZ2 1314 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 IKBKBO14920 756 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 ZBED4O75132 1171 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 RPN1P04843 607 aaKnown RBP7.64□□□□□ -1.19
MSH2-204ENST00000461394 ALAS1P13196 640 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 CCT6AP40227 531 aaKnown RBP7.64□□□□□ -1.19
MSH2-204ENST00000461394 FXR2P51116 673 aaKnown RBP eCLIP7.64□□□□□ -1.19
MSH2-204ENST00000461394 USP11P51784 963 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 ASIC1P78348 528 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 ARHGAP4P98171 946 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 AMPD3Q01432 767 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 MAP3K10Q02779 954 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 DPYDQ12882 1025 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 SPP2Q13103 211 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 STIM1Q13586 685 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 CUL4BQ13620 913 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 MORC3Q14149 939 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 MCM6Q14566 821 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 GPR162Q16538 588 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 PRR16Q569H4 304 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 PPP4R3AQ6IN85 833 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 DPY19L2Q6NUT2 758 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 PDXDC2PQ6P474 469 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 LDHDQ86WU2 507 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 SULF1Q8IWU6 871 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 TRMT44Q8IYL2 757 aaKnown RBP7.64□□□□□ -1.19
MSH2-204ENST00000461394 SLFN12Q8IYM2 578 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 CPXCR1Q8N123 301 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 ERMNQ8TAM6 284 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 LPAR1Q92633 364 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 ZKSCAN4Q969J2 545 aaPredicted RBP7.64□□□□□ -1.19
MSH2-204ENST00000461394 GSDMAQ96QA5 445 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 SYT17Q9BSW7 474 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 CUEDC2Q9H467 287 aa7.64□□□□□ -1.19
MSH2-204ENST00000461394 RPAP3Q9H6T3 665 aaPredicted RBP7.64□□□□□ -1.19
MSH2-204ENST00000461394 TTC12Q9H892 705 aaPredicted RBP7.64□□□□□ -1.19
MSH2-204ENST00000461394 MAGEF1Q9HAY2 307 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms